RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 RAB3GAP2Q9H2M9 1393 aa12.16□□□□□ -0.46
SORL1-207ENST00000528339 FER1L4A9Z1Z3 1794 aa12.15□□□□□ -0.46
SORL1-207ENST00000528339 PPLO60437 1756 aa12.15□□□□□ -0.46
SORL1-207ENST00000528339 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
SORL1-207ENST00000528339 A2MP01023 1474 aa12.15□□□□□ -0.46
SORL1-207ENST00000528339 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.46
SORL1-207ENST00000528339 KIAA1210Q9ULL0 1709 aa12.15□□□□□ -0.46
SORL1-207ENST00000528339 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
SORL1-207ENST00000528339 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
SORL1-207ENST00000528339 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
SORL1-207ENST00000528339 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
SORL1-207ENST00000528339 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
SORL1-207ENST00000528339 MADDQ8WXG6 1647 aa12.13□□□□□ -0.47
SORL1-207ENST00000528339 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
SORL1-207ENST00000528339 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
SORL1-207ENST00000528339 EFCAB2Q5VUJ9 269 aa12.12□□□□□ -0.47
SORL1-207ENST00000528339 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
SORL1-207ENST00000528339 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
SORL1-207ENST00000528339 ANKRD30AQ9BXX3 1397 aa12.11□□□□□ -0.47
SORL1-207ENST00000528339 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
SORL1-207ENST00000528339 TMEM131LA2VDJ0 1609 aa12.1□□□□□ -0.47
SORL1-207ENST00000528339 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
SORL1-207ENST00000528339 CLSPNQ9HAW4 1339 aa12.09□□□□□ -0.47
SORL1-207ENST00000528339 KIF1BO60333 1816 aa12.09□□□□□ -0.47
SORL1-207ENST00000528339 APLP2Q06481 763 aa12.08□□□□□ -0.48
SORL1-207ENST00000528339 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.48
SORL1-207ENST00000528339 UBR1Q8IWV7 1749 aa12.08□□□□□ -0.48
SORL1-207ENST00000528339 NOS1P29475 1434 aa12.08□□□□□ -0.48
SORL1-207ENST00000528339 TRPM1Q7Z4N2 1603 aa12.06□□□□□ -0.48
SORL1-207ENST00000528339 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
SORL1-207ENST00000528339 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
SORL1-207ENST00000528339 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
SORL1-207ENST00000528339 NRXN3Q9Y4C0 1643 aa12.03□□□□□ -0.48
SORL1-207ENST00000528339 IQGAP1P46940 1657 aa12.03□□□□□ -0.48
SORL1-207ENST00000528339 HNRNPMP52272 730 aaKnown RBP eCLIP12.03□□□□□ -0.48
SORL1-207ENST00000528339 ARID3CA6NKF2 412 aa12.02□□□□□ -0.48
SORL1-207ENST00000528339 UGGT1Q9NYU2 1555 aa12.02□□□□□ -0.49
SORL1-207ENST00000528339 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
SORL1-207ENST00000528339 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
SORL1-207ENST00000528339 FAM69CQ0P6D2 419 aa12□□□□□ -0.49
SORL1-207ENST00000528339 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
SORL1-207ENST00000528339 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
SORL1-207ENST00000528339 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
SORL1-207ENST00000528339 NPATQ14207 1427 aa11.98□□□□□ -0.49
SORL1-207ENST00000528339 MYOM2P54296 1465 aa11.97□□□□□ -0.49
SORL1-207ENST00000528339 AFAP1Q8N556 730 aa11.97□□□□□ -0.49
SORL1-207ENST00000528339 ERVK-7P63135 1459 aa11.96□□□□□ -0.49
SORL1-207ENST00000528339 RIMS1Q86UR5 1692 aaKnown RBP11.96□□□□□ -0.49
SORL1-207ENST00000528339 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
SORL1-207ENST00000528339 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.5
SORL1-207ENST00000528339 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.5
SORL1-207ENST00000528339 SETBP1Q9Y6X0 1596 aa11.95□□□□□ -0.5
SORL1-207ENST00000528339 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
SORL1-207ENST00000528339 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
SORL1-207ENST00000528339 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
SORL1-207ENST00000528339 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
SORL1-207ENST00000528339 SLIT1O75093 1534 aa11.93□□□□□ -0.5
SORL1-207ENST00000528339 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
SORL1-207ENST00000528339 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
SORL1-207ENST00000528339 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
SORL1-207ENST00000528339 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
SORL1-207ENST00000528339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
SORL1-207ENST00000528339 RAPGEF3O95398 923 aa11.89□□□□□ -0.51
SORL1-207ENST00000528339 FAM50AQ14320 339 aaKnown RBP11.89□□□□□ -0.51
SORL1-207ENST00000528339 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
SORL1-207ENST00000528339 ARHGEF28Q8N1W1 1705 aaKnown RBP11.89□□□□□ -0.51
SORL1-207ENST00000528339 ASXL1Q8IXJ9 1541 aa11.88□□□□□ -0.51
SORL1-207ENST00000528339 XRN1Q8IZH2 1706 aaKnown RBP11.86□□□□□ -0.51
SORL1-207ENST00000528339 MED14O60244 1454 aa11.86□□□□□ -0.51
SORL1-207ENST00000528339 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
SORL1-207ENST00000528339 STRCQ7RTU9 1775 aa11.85□□□□□ -0.51
SORL1-207ENST00000528339 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
SORL1-207ENST00000528339 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
SORL1-207ENST00000528339 MPHOSPH9Q99550 1183 aa11.84□□□□□ -0.51
SORL1-207ENST00000528339 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
SORL1-207ENST00000528339 MYOM1P52179 1685 aa11.84□□□□□ -0.51
SORL1-207ENST00000528339 TSPY4P0CV99 314 aa11.84□□□□□ -0.51
SORL1-207ENST00000528339 TSPY10P0CW01 314 aa11.84□□□□□ -0.51
SORL1-207ENST00000528339 NWD1Q149M9 1564 aa11.83□□□□□ -0.51
SORL1-207ENST00000528339 RRP7BPQ9NSQ0 103 aa11.83□□□□□ -0.52
SORL1-207ENST00000528339 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
SORL1-207ENST00000528339 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
SORL1-207ENST00000528339 A2ML1A8K2U0 1454 aa11.82□□□□□ -0.52
SORL1-207ENST00000528339 CHD2O14647 1828 aaKnown RBP11.81□□□□□ -0.52
SORL1-207ENST00000528339 PIK3C2GO75747 1445 aa11.8□□□□□ -0.52
SORL1-207ENST00000528339 NUP155O75694 1391 aa11.8□□□□□ -0.52
SORL1-207ENST00000528339 ZNF777Q9ULD5 760 aaPredicted RBP11.8□□□□□ -0.52
SORL1-207ENST00000528339 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
SORL1-207ENST00000528339 ADGRB2O60241 1585 aa11.79□□□□□ -0.52
SORL1-207ENST00000528339 CFAP65Q6ZU64 1925 aaKnown RBP11.79□□□□□ -0.52
SORL1-207ENST00000528339 PTPRMP28827 1452 aa11.79□□□□□ -0.52
SORL1-207ENST00000528339 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
SORL1-207ENST00000528339 CPS1P31327 1500 aa11.78□□□□□ -0.52
SORL1-207ENST00000528339 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
SORL1-207ENST00000528339 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
SORL1-207ENST00000528339 STRCP1A6NGW2 1772 aa11.78□□□□□ -0.52
SORL1-207ENST00000528339 USP54Q70EL1 1684 aa11.77□□□□□ -0.52
SORL1-207ENST00000528339 DLC1Q96QB1 1528 aa11.77□□□□□ -0.53
SORL1-207ENST00000528339 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
SORL1-207ENST00000528339 ALKQ9UM73 1620 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms