RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
RBM39-243ENST00000528062 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
RBM39-243ENST00000528062 REREQ9P2R6 1566 aa18.63■□□□□ 0.57
RBM39-243ENST00000528062 A2MP01023 1474 aa18.62■□□□□ 0.57
RBM39-243ENST00000528062 SETD5Q9C0A6 1442 aa18.62■□□□□ 0.57
RBM39-243ENST00000528062 ATP10AO60312 1499 aa18.62■□□□□ 0.57
RBM39-243ENST00000528062 MYT1LQ9UL68 1186 aa18.61■□□□□ 0.57
RBM39-243ENST00000528062 BCORL1Q5H9F3 1711 aa18.61■□□□□ 0.57
RBM39-243ENST00000528062 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
RBM39-243ENST00000528062 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
RBM39-243ENST00000528062 EIF2AK4Q9P2K8 1649 aaKnown RBP18.59■□□□□ 0.57
RBM39-243ENST00000528062 ERBINQ96RT1 1412 aa18.59■□□□□ 0.57
RBM39-243ENST00000528062 MROH1Q8NDA8 1641 aa18.57■□□□□ 0.56
RBM39-243ENST00000528062 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
RBM39-243ENST00000528062 SIN3AQ96ST3 1273 aa18.56■□□□□ 0.56
RBM39-243ENST00000528062 MYT1Q01538 1121 aa18.55■□□□□ 0.56
RBM39-243ENST00000528062 RNF17Q9BXT8 1623 aaKnown RBP18.55■□□□□ 0.56
RBM39-243ENST00000528062 AGLP35573 1532 aa18.55■□□□□ 0.56
RBM39-243ENST00000528062 UNC13BO14795 1591 aa18.54■□□□□ 0.56
RBM39-243ENST00000528062 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
RBM39-243ENST00000528062 KIF3BO15066 747 aa18.48■□□□□ 0.55
RBM39-243ENST00000528062 VWDEQ8N2E2 1590 aa18.48■□□□□ 0.55
RBM39-243ENST00000528062 CEP152O94986 1710 aa18.46■□□□□ 0.55
RBM39-243ENST00000528062 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
RBM39-243ENST00000528062 IQGAP3Q86VI3 1631 aa18.46■□□□□ 0.55
RBM39-243ENST00000528062 DDX10Q13206 875 aaKnown RBP18.46■□□□□ 0.55
RBM39-243ENST00000528062 PZPP20742 1482 aa18.44■□□□□ 0.54
RBM39-243ENST00000528062 PPP1R15AO75807 674 aaPredicted RBP18.42■□□□□ 0.54
RBM39-243ENST00000528062 FAM135AQ9P2D6 1515 aa18.42■□□□□ 0.54
RBM39-243ENST00000528062 ABCC3O15438 1527 aa18.41■□□□□ 0.54
RBM39-243ENST00000528062 GGT6Q6P531 493 aa18.41■□□□□ 0.54
RBM39-243ENST00000528062 CLTCQ00610 1675 aaKnown RBP18.4■□□□□ 0.54
RBM39-243ENST00000528062 ZC3H13Q5T200 1668 aaKnown RBP18.4■□□□□ 0.54
RBM39-243ENST00000528062 ADAMTSL3P82987 1691 aa18.4■□□□□ 0.54
RBM39-243ENST00000528062 HIRIP3Q9BW71 556 aaPredicted RBP18.4■□□□□ 0.54
RBM39-243ENST00000528062 NUP155O75694 1391 aa18.39■□□□□ 0.54
RBM39-243ENST00000528062 FER1L4A9Z1Z3 1794 aa18.39■□□□□ 0.53
RBM39-243ENST00000528062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.534e-13■■□□□ 11.5
RBM39-243ENST00000528062 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
RBM39-243ENST00000528062 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
RBM39-243ENST00000528062 MLECQ14165 292 aa18.39■□□□□ 0.53
RBM39-243ENST00000528062 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
RBM39-243ENST00000528062 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
RBM39-243ENST00000528062 CAMSAP1Q5T5Y3 1602 aa18.38■□□□□ 0.53
RBM39-243ENST00000528062 MADDQ8WXG6 1647 aa18.38■□□□□ 0.53
RBM39-243ENST00000528062 TET3O43151 1660 aa18.38■□□□□ 0.53
RBM39-243ENST00000528062 E9PCH4 1651 aa18.37■□□□□ 0.53
RBM39-243ENST00000528062 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
RBM39-243ENST00000528062 EFCAB6Q5THR3 1501 aa18.35■□□□□ 0.53
RBM39-243ENST00000528062 MROH2AA6NES4 1674 aa18.33■□□□□ 0.52
RBM39-243ENST00000528062 RIMS1Q86UR5 1692 aaKnown RBP18.33■□□□□ 0.52
RBM39-243ENST00000528062 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
RBM39-243ENST00000528062 MPHOSPH9Q99550 1183 aa18.31■□□□□ 0.52
RBM39-243ENST00000528062 KANK1Q14678 1352 aa18.31■□□□□ 0.52
RBM39-243ENST00000528062 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
RBM39-243ENST00000528062 C3P01024 1663 aa18.3■□□□□ 0.52
RBM39-243ENST00000528062 NPATQ14207 1427 aa18.3■□□□□ 0.52
RBM39-243ENST00000528062 BCANQ96GW7 911 aa18.29■□□□□ 0.52
RBM39-243ENST00000528062 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
RBM39-243ENST00000528062 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
RBM39-243ENST00000528062 FOXD1Q16676 465 aa18.28■□□□□ 0.52
RBM39-243ENST00000528062 ARHGAP31Q2M1Z3 1444 aa18.27■□□□□ 0.51
RBM39-243ENST00000528062 PREX1Q8TCU6 1659 aa18.27■□□□□ 0.51
RBM39-243ENST00000528062 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
RBM39-243ENST00000528062 FKBP8Q14318 412 aa18.26■□□□□ 0.51
RBM39-243ENST00000528062 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
RBM39-243ENST00000528062 PKD2Q13563 968 aa18.25■□□□□ 0.51
RBM39-243ENST00000528062 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
RBM39-243ENST00000528062 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
RBM39-243ENST00000528062 PLA2R1Q13018 1463 aa18.25■□□□□ 0.51
RBM39-243ENST00000528062 ZMYM3Q14202 1370 aa18.24■□□□□ 0.51
RBM39-243ENST00000528062 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
RBM39-243ENST00000528062 KDM4FA0A1W2PPD8 638 aa18.23■□□□□ 0.51
RBM39-243ENST00000528062 SYNMO15061 1565 aa18.23■□□□□ 0.51
RBM39-243ENST00000528062 ANP32CO43423 234 aa18.23■□□□□ 0.51
RBM39-243ENST00000528062 SPATA31D1Q6ZQQ2 1576 aa18.21■□□□□ 0.51
RBM39-243ENST00000528062 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
RBM39-243ENST00000528062 PTPRTO14522 1441 aa18.21■□□□□ 0.5
RBM39-243ENST00000528062 UGGT1Q9NYU2 1555 aa18.2■□□□□ 0.5
RBM39-243ENST00000528062 NOS1P29475 1434 aa18.2■□□□□ 0.5
RBM39-243ENST00000528062 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
RBM39-243ENST00000528062 PTPRMP28827 1452 aa18.2■□□□□ 0.5
RBM39-243ENST00000528062 CEBPAP49715 358 aaPredicted RBP18.2■□□□□ 0.5
RBM39-243ENST00000528062 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
RBM39-243ENST00000528062 TRPM2O94759 1503 aa18.19■□□□□ 0.5
RBM39-243ENST00000528062 PIK3C2BO00750 1634 aa18.18■□□□□ 0.5
RBM39-243ENST00000528062 CLTCL1P53675 1640 aa18.18■□□□□ 0.5
RBM39-243ENST00000528062 ESF1Q9H501 851 aaKnown RBP18.18■□□□□ 0.5
RBM39-243ENST00000528062 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
RBM39-243ENST00000528062 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
RBM39-243ENST00000528062 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
RBM39-243ENST00000528062 NEFLP07196 543 aa18.09■□□□□ 0.49
RBM39-243ENST00000528062 TNRQ92752 1358 aa18.09■□□□□ 0.49
RBM39-243ENST00000528062 KIF1BO60333 1816 aa18.08■□□□□ 0.49
RBM39-243ENST00000528062 CCDC144AA2RUR9 1427 aa18.07■□□□□ 0.48
RBM39-243ENST00000528062 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
RBM39-243ENST00000528062 TMEM131LA2VDJ0 1609 aa18.07■□□□□ 0.48
RBM39-243ENST00000528062 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
RBM39-243ENST00000528062 ADGRB3O60242 1522 aa18.06■□□□□ 0.48
RBM39-243ENST00000528062 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms