RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 KDM5DQ9BY66 1539 aa27.32■■□□□ 1.96
ATM-213ENST00000527891 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
ATM-213ENST00000527891 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
ATM-213ENST00000527891 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
ATM-213ENST00000527891 A2ML1A8K2U0 1454 aa27.3■■□□□ 1.96
ATM-213ENST00000527891 MAP3K1Q13233 1512 aa27.28■■□□□ 1.96
ATM-213ENST00000527891 PZPP20742 1482 aa27.28■■□□□ 1.96
ATM-213ENST00000527891 WASHC2CQ9Y4E1 1318 aa27.27■■□□□ 1.96
ATM-213ENST00000527891 TNRQ92752 1358 aa27.26■■□□□ 1.95
ATM-213ENST00000527891 DNMT1P26358 1616 aaKnown RBP27.26■■□□□ 1.95
ATM-213ENST00000527891 ZNF335Q9H4Z2 1342 aaPredicted RBP27.25■■□□□ 1.95
ATM-213ENST00000527891 FBXO31Q5XUX0 539 aaPredicted RBP27.25■■□□□ 1.95
ATM-213ENST00000527891 KANK4Q5T7N3 995 aaPredicted RBP27.24■■□□□ 1.95
ATM-213ENST00000527891 MAST1Q9Y2H9 1570 aa27.23■■□□□ 1.95
ATM-213ENST00000527891 MIA2Q96PC5 1412 aa27.22■■□□□ 1.95
ATM-213ENST00000527891 MYOM3Q5VTT5 1437 aa27.21■■□□□ 1.95
ATM-213ENST00000527891 RNF17Q9BXT8 1623 aaKnown RBP27.17■■□□□ 1.94
ATM-213ENST00000527891 NLRP1Q9C000 1473 aa27.14■■□□□ 1.94
ATM-213ENST00000527891 EIF2AK4Q9P2K8 1649 aaKnown RBP27.14■■□□□ 1.94
ATM-213ENST00000527891 POLR1AO95602 1720 aaPredicted RBP27.13■■□□□ 1.93
ATM-213ENST00000527891 ABCC3O15438 1527 aa27.12■■□□□ 1.93
ATM-213ENST00000527891 ZC3H13Q5T200 1668 aaKnown RBP27.12■■□□□ 1.93
ATM-213ENST00000527891 NEURL4Q96JN8 1562 aa27.12■■□□□ 1.93
ATM-213ENST00000527891 DISP3Q9P2K9 1392 aa27.1■■□□□ 1.93
ATM-213ENST00000527891 THEMISQ8N1K5 641 aaPredicted RBP27.1■■□□□ 1.93
ATM-213ENST00000527891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.93
ATM-213ENST00000527891 UGGT1Q9NYU2 1555 aa27.09■■□□□ 1.93
ATM-213ENST00000527891 UBAP1LF5GYI3 381 aa27.08■■□□□ 1.93
ATM-213ENST00000527891 DUOX2Q9NRD8 1548 aa27.07■■□□□ 1.92
ATM-213ENST00000527891 ANKLE2Q86XL3 938 aa27.07■■□□□ 1.92
ATM-213ENST00000527891 MROH1Q8NDA8 1641 aa27.07■■□□□ 1.92
ATM-213ENST00000527891 SPATA31D1Q6ZQQ2 1576 aa27.06■■□□□ 1.92
ATM-213ENST00000527891 APLP2Q06481 763 aa27.06■■□□□ 1.92
ATM-213ENST00000527891 SHANK2Q9UPX8 1470 aa27.04■■□□□ 1.92
ATM-213ENST00000527891 ERVK-7P63135 1459 aa27.03■■□□□ 1.92
ATM-213ENST00000527891 CPS1P31327 1500 aa27.02■■□□□ 1.92
ATM-213ENST00000527891 KIF15Q9NS87 1388 aa27.02■■□□□ 1.92
ATM-213ENST00000527891 PTPN23Q9H3S7 1636 aa27.01■■□□□ 1.92
ATM-213ENST00000527891 ABCC5O15440 1437 aa27.01■■□□□ 1.91
ATM-213ENST00000527891 DEPDC5O75140 1603 aa27.01■■□□□ 1.91
ATM-213ENST00000527891 MED14O60244 1454 aa27■■□□□ 1.91
ATM-213ENST00000527891 CROCC2H7BZ55 1655 aa27■■□□□ 1.91
ATM-213ENST00000527891 NPHP4O75161 1426 aaPredicted RBP26.99■■□□□ 1.91
ATM-213ENST00000527891 CEP152O94986 1710 aa26.99■■□□□ 1.91
ATM-213ENST00000527891 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
ATM-213ENST00000527891 PRDM15P57071 1507 aaPredicted RBP26.97■■□□□ 1.91
ATM-213ENST00000527891 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
ATM-213ENST00000527891 DAPK1P53355 1430 aa26.96■■□□□ 1.91
ATM-213ENST00000527891 FGD6Q6ZV73 1430 aa26.96■■□□□ 1.91
ATM-213ENST00000527891 VWDEQ8N2E2 1590 aa26.96■■□□□ 1.91
ATM-213ENST00000527891 ILDR2Q71H61 639 aa26.94■■□□□ 1.9
ATM-213ENST00000527891 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
ATM-213ENST00000527891 ARHGAP31Q2M1Z3 1444 aa26.92■■□□□ 1.9
ATM-213ENST00000527891 TOM1O60784 492 aa26.89■■□□□ 1.9
ATM-213ENST00000527891 UBR1Q8IWV7 1749 aa26.89■■□□□ 1.9
ATM-213ENST00000527891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.87■■□□□ 1.899e-10■■□□□ 12.4
ATM-213ENST00000527891 SCAF1Q9H7N4 1312 aaKnown RBP26.87■■□□□ 1.89
ATM-213ENST00000527891 KANK1Q14678 1352 aa26.86■■□□□ 1.89
ATM-213ENST00000527891 ANKRD30AQ9BXX3 1397 aa26.86■■□□□ 1.89
ATM-213ENST00000527891 PIP4K2BP78356 416 aa26.85■■□□□ 1.89
ATM-213ENST00000527891 CFAP65Q6ZU64 1925 aaKnown RBP26.84■■□□□ 1.89
ATM-213ENST00000527891 CHIC2Q9UKJ5 165 aa26.84■■□□□ 1.89
ATM-213ENST00000527891 SCAF11Q99590 1463 aaKnown RBP26.84■■□□□ 1.89
ATM-213ENST00000527891 ARHGAP23Q9P227 1491 aa26.82■■□□□ 1.88
ATM-213ENST00000527891 SLIT1O75093 1534 aa26.82■■□□□ 1.88
ATM-213ENST00000527891 SOCS7O14512 581 aa26.8■■□□□ 1.88
ATM-213ENST00000527891 LMTK2Q8IWU2 1503 aa26.8■■□□□ 1.88
ATM-213ENST00000527891 HSPA1LP34931 641 aa26.79■■□□□ 1.88
ATM-213ENST00000527891 TXNDC2Q86VQ3 553 aa26.78■■□□□ 1.88
ATM-213ENST00000527891 SYNMO15061 1565 aa26.78■■□□□ 1.88
ATM-213ENST00000527891 STRCP1A6NGW2 1772 aa26.78■■□□□ 1.88
ATM-213ENST00000527891 LRRC7Q96NW7 1537 aa26.77■■□□□ 1.88
ATM-213ENST00000527891 LTKP29376 864 aa26.77■■□□□ 1.88
ATM-213ENST00000527891 PIK3C2BO00750 1634 aa26.76■■□□□ 1.87
ATM-213ENST00000527891 ADGRL2O95490 1459 aa26.76■■□□□ 1.87
ATM-213ENST00000527891 EID1Q9Y6B2 187 aa26.75■■□□□ 1.87
ATM-213ENST00000527891 ALKQ9UM73 1620 aa26.75■■□□□ 1.87
ATM-213ENST00000527891 TMEM2Q9UHN6 1383 aa26.73■■□□□ 1.87
ATM-213ENST00000527891 STAG3Q9UJ98 1225 aa26.73■■□□□ 1.87
ATM-213ENST00000527891 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
ATM-213ENST00000527891 EFCAB6Q5THR3 1501 aa26.7■■□□□ 1.87
ATM-213ENST00000527891 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.87
ATM-213ENST00000527891 IDI1Q13907 227 aa26.69■■□□□ 1.86
ATM-213ENST00000527891 NOS1P29475 1434 aa26.68■■□□□ 1.86
ATM-213ENST00000527891 ANKRD50Q9ULJ7 1429 aa26.67■■□□□ 1.86
ATM-213ENST00000527891 MED1Q15648 1581 aaPredicted RBP26.66■■□□□ 1.86
ATM-213ENST00000527891 ADGRB3O60242 1522 aa26.63■■□□□ 1.85
ATM-213ENST00000527891 RPRD2Q5VT52 1461 aaKnown RBP26.62■■□□□ 1.85
ATM-213ENST00000527891 SLC52A1Q9NWF4 448 aa26.61■■□□□ 1.85
ATM-213ENST00000527891 TET3O43151 1660 aa26.56■■□□□ 1.84
ATM-213ENST00000527891 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
ATM-213ENST00000527891 XIRP1Q702N8 1843 aaKnown RBP26.55■■□□□ 1.84
ATM-213ENST00000527891 SLC26A8Q96RN1 970 aa26.54■■□□□ 1.84
ATM-213ENST00000527891 KCNA6P17658 529 aa26.53■■□□□ 1.84
ATM-213ENST00000527891 UNC13BO14795 1591 aa26.52■■□□□ 1.84
ATM-213ENST00000527891 TMEM94Q12767 1356 aa26.51■■□□□ 1.83
ATM-213ENST00000527891 ROCK1Q13464 1354 aa26.5■■□□□ 1.83
ATM-213ENST00000527891 GCC2Q8IWJ2 1684 aa26.49■■□□□ 1.83
ATM-213ENST00000527891 PHF23Q9BUL5 403 aaPredicted RBP26.48■■□□□ 1.83
ATM-213ENST00000527891 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms