RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 RAPGEF3O95398 923 aa7.12□□□□□ -1.27
CHD7-205ENST00000527825 CHRM1P11229 460 aaPredicted RBP7.12□□□□□ -1.27
CHD7-205ENST00000527825 ZNF467Q7Z7K2 595 aaPredicted RBP7.12□□□□□ -1.27
CHD7-205ENST00000527825 SETD1BQ9UPS6 1966 aaKnown RBP7.11□□□□□ -1.27
CHD7-205ENST00000527825 CIZ1Q9ULV3 898 aaPredicted RBP7.11□□□□□ -1.27
CHD7-205ENST00000527825 FRMPD1Q5SYB0 1578 aa7.11□□□□□ -1.27
CHD7-205ENST00000527825 ABCA9Q8IUA7 1624 aa7.1□□□□□ -1.27
CHD7-205ENST00000527825 UBAP1LF5GYI3 381 aa7.1□□□□□ -1.27
CHD7-205ENST00000527825 PLCG2P16885 1265 aa7.1□□□□□ -1.27
CHD7-205ENST00000527825 RICTORQ6R327 1708 aa7.1□□□□□ -1.27
CHD7-205ENST00000527825 KIF27Q86VH2 1401 aa7.1□□□□□ -1.27
CHD7-205ENST00000527825 IRX5P78411 483 aaPredicted RBP7.09□□□□□ -1.27
CHD7-205ENST00000527825 MLECQ14165 292 aa7.09□□□□□ -1.27
CHD7-205ENST00000527825 NEO1Q92859 1461 aa7.09□□□□□ -1.27
CHD7-205ENST00000527825 PTPRTO14522 1441 aa7.09□□□□□ -1.28
CHD7-205ENST00000527825 UHRF1BP1Q6BDS2 1440 aa7.09□□□□□ -1.28
CHD7-205ENST00000527825 IGF1RP08069 1367 aa7.08□□□□□ -1.28
CHD7-205ENST00000527825 SUPT6HQ7KZ85 1726 aaKnown RBP7.08□□□□□ -1.28
CHD7-205ENST00000527825 FAM9AQ8IZU1 332 aaPredicted RBP7.08□□□□□ -1.28
CHD7-205ENST00000527825 CTTNBP2Q8WZ74 1663 aa7.08□□□□□ -1.28
CHD7-205ENST00000527825 AKNAQ7Z591 1439 aa7.08□□□□□ -1.28
CHD7-205ENST00000527825 LTBP4Q8N2S1 1624 aa7.08□□□□□ -1.28
CHD7-205ENST00000527825 CFAP74Q9C0B2 1584 aa7.08□□□□□ -1.28
CHD7-205ENST00000527825 CARMIL1Q5VZK9 1371 aa7.08□□□□□ -1.28
CHD7-205ENST00000527825 EFCAB5A4FU69 1503 aa7.07□□□□□ -1.28
CHD7-205ENST00000527825 UGGT2Q9NYU1 1516 aa7.07□□□□□ -1.28
CHD7-205ENST00000527825 SIGLEC1Q9BZZ2 1709 aa7.07□□□□□ -1.28
CHD7-205ENST00000527825 ZFYVE16Q7Z3T8 1539 aa7.06□□□□□ -1.28
CHD7-205ENST00000527825 PSEN1P49768 467 aa7.06□□□□□ -1.28
CHD7-205ENST00000527825 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
CHD7-205ENST00000527825 ABCA8O94911 1581 aa7.06□□□□□ -1.28
CHD7-205ENST00000527825 DENND4BO75064 1496 aaPredicted RBP7.05□□□□□ -1.28
CHD7-205ENST00000527825 GOLGA2Q08379 1002 aa7.04□□□□□ -1.28
CHD7-205ENST00000527825 PDAP1Q13442 181 aaKnown RBP7.04□□□□□ -1.28
CHD7-205ENST00000527825 GOLGA3Q08378 1498 aa7.04□□□□□ -1.28
CHD7-205ENST00000527825 POTEMA6NI47 508 aa7.03□□□□□ -1.28
CHD7-205ENST00000527825 ARID3CA6NKF2 412 aa7.03□□□□□ -1.28
CHD7-205ENST00000527825 C3P01024 1663 aa7.03□□□□□ -1.28
CHD7-205ENST00000527825 CEBPAP49715 358 aaPredicted RBP7.02□□□□□ -1.29
CHD7-205ENST00000527825 PIP4K2BP78356 416 aa7.02□□□□□ -1.29
CHD7-205ENST00000527825 MKRN3Q13064 507 aaKnown RBP7.02□□□□□ -1.29
CHD7-205ENST00000527825 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
CHD7-205ENST00000527825 ZMYM4Q5VZL5 1548 aa7.01□□□□□ -1.29
CHD7-205ENST00000527825 ARHGEF12Q9NZN5 1544 aa7.01□□□□□ -1.29
CHD7-205ENST00000527825 HSPA1LP34931 641 aa7.01□□□□□ -1.29
CHD7-205ENST00000527825 POTEGQ6S5H5 508 aa7.01□□□□□ -1.29
CHD7-205ENST00000527825 PDCD7Q8N8D1 485 aaKnown RBP7.01□□□□□ -1.29
CHD7-205ENST00000527825 FAM163AQ96GL9 167 aaPredicted RBP7.01□□□□□ -1.29
CHD7-205ENST00000527825 SLAIN1Q8ND83 568 aa7□□□□□ -1.29
CHD7-205ENST00000527825 MAGI2Q86UL8 1455 aa6.99□□□□□ -1.29
CHD7-205ENST00000527825 HECW1Q76N89 1606 aa6.99□□□□□ -1.29
CHD7-205ENST00000527825 PKD2Q13563 968 aa6.99□□□□□ -1.29
CHD7-205ENST00000527825 ESF1Q9H501 851 aaKnown RBP6.99□□□□□ -1.29
CHD7-205ENST00000527825 FHOD3Q2V2M9 1422 aa6.99□□□□□ -1.29
CHD7-205ENST00000527825 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
CHD7-205ENST00000527825 CAMSAP1Q5T5Y3 1602 aa6.98□□□□□ -1.29
CHD7-205ENST00000527825 TOM1O60784 492 aa6.98□□□□□ -1.29
CHD7-205ENST00000527825 CABP2Q9NPB3 220 aa6.98□□□□□ -1.29
CHD7-205ENST00000527825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.294e-9■□□□□ 9.4
CHD7-205ENST00000527825 NCOA1Q15788 1441 aa6.98□□□□□ -1.29
CHD7-205ENST00000527825 ZNF335Q9H4Z2 1342 aaPredicted RBP6.98□□□□□ -1.29
CHD7-205ENST00000527825 C9orf84Q5VXU9 1444 aa6.97□□□□□ -1.29
CHD7-205ENST00000527825 ATP10BO94823 1461 aa6.97□□□□□ -1.29
CHD7-205ENST00000527825 ATP10AO60312 1499 aa6.96□□□□□ -1.3
CHD7-205ENST00000527825 RAPGEF6Q8TEU7 1601 aa6.95□□□□□ -1.3
CHD7-205ENST00000527825 ECM2O94769 699 aaPredicted RBP6.95□□□□□ -1.3
CHD7-205ENST00000527825 RNF25Q96BH1 459 aaPredicted RBP6.95□□□□□ -1.3
CHD7-205ENST00000527825 MYT1LQ9UL68 1186 aa6.95□□□□□ -1.3
CHD7-205ENST00000527825 SETD1AO15047 1707 aaKnown RBP6.95□□□□□ -1.3
CHD7-205ENST00000527825 SUPT5HO00267 1087 aaKnown RBP6.94□□□□□ -1.3
CHD7-205ENST00000527825 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.94□□□□□ -1.3
CHD7-205ENST00000527825 NCKAP5LQ9HCH0 1330 aa6.94□□□□□ -1.3
CHD7-205ENST00000527825 TRAPPC8Q9Y2L5 1435 aa6.93□□□□□ -1.3
CHD7-205ENST00000527825 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
CHD7-205ENST00000527825 L3MBTL3Q96JM7 780 aaPredicted RBP6.93□□□□□ -1.3
CHD7-205ENST00000527825 POLR1AO95602 1720 aaPredicted RBP6.93□□□□□ -1.3
CHD7-205ENST00000527825 DPY19L2Q6NUT2 758 aa6.92□□□□□ -1.3
CHD7-205ENST00000527825 C3orf67Q6ZVT6 689 aa6.92□□□□□ -1.3
CHD7-205ENST00000527825 PLSCR2Q9NRY7 297 aa6.92□□□□□ -1.3
CHD7-205ENST00000527825 ZNF142P52746 1687 aaPredicted RBP6.92□□□□□ -1.3
CHD7-205ENST00000527825 MYO5CQ9NQX4 1742 aa6.92□□□□□ -1.3
CHD7-205ENST00000527825 CPS1P31327 1500 aa6.91□□□□□ -1.3
CHD7-205ENST00000527825 MROH2AA6NES4 1674 aa6.91□□□□□ -1.3
CHD7-205ENST00000527825 AMER1Q5JTC6 1135 aaPredicted RBP6.91□□□□□ -1.3
CHD7-205ENST00000527825 EFCAB3Q8N7B9 438 aa6.91□□□□□ -1.3
CHD7-205ENST00000527825 PTPRKQ15262 1439 aa6.91□□□□□ -1.3
CHD7-205ENST00000527825 SCAPERQ9BY12 1400 aa6.91□□□□□ -1.3
CHD7-205ENST00000527825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD7-205ENST00000527825 MYO3AQ8NEV4 1616 aa6.9□□□□□ -1.3
CHD7-205ENST00000527825 PLEKHD1A6NEE1 506 aa6.9□□□□□ -1.3
CHD7-205ENST00000527825 ST18O60284 1047 aa6.9□□□□□ -1.3
CHD7-205ENST00000527825 P3H3Q8IVL6 736 aa6.9□□□□□ -1.3
CHD7-205ENST00000527825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.89□□□□□ -1.31
CHD7-205ENST00000527825 RGL2O15211 777 aa6.89□□□□□ -1.31
CHD7-205ENST00000527825 VGFO15240 615 aaPredicted RBP6.89□□□□□ -1.31
CHD7-205ENST00000527825 ZFP91Q96JP5 570 aaPredicted RBP6.89□□□□□ -1.31
CHD7-205ENST00000527825 RTN4Q9NQC3 1192 aaKnown RBP6.89□□□□□ -1.31
CHD7-205ENST00000527825 PCDH10Q9P2E7 1040 aa6.89□□□□□ -1.31
CHD7-205ENST00000527825 PLA2R1Q13018 1463 aa6.88□□□□□ -1.31
CHD7-205ENST00000527825 CNTLNQ9NXG0 1405 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms