RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ZNF142P52746 1687 aaPredicted RBP30.04■■■□□ 2.4
CAPN1-211ENST00000527739 ARHGEF5Q12774 1597 aa30.03■■■□□ 2.4
CAPN1-211ENST00000527739 CEP170BQ9Y4F5 1589 aaPredicted RBP30.03■■■□□ 2.4
CAPN1-211ENST00000527739 ZNF335Q9H4Z2 1342 aaPredicted RBP29.97■■■□□ 2.39
CAPN1-211ENST00000527739 WASHC2CQ9Y4E1 1318 aa29.97■■■□□ 2.39
CAPN1-211ENST00000527739 PLA2R1Q13018 1463 aa29.96■■■□□ 2.39
CAPN1-211ENST00000527739 TCOF1Q13428 1488 aaKnown RBP29.95■■■□□ 2.39
CAPN1-211ENST00000527739 IQSEC2Q5JU85 1478 aa29.95■■■□□ 2.39
CAPN1-211ENST00000527739 DISP3Q9P2K9 1392 aa29.94■■■□□ 2.38
CAPN1-211ENST00000527739 PKD2Q13563 968 aa29.92■■■□□ 2.38
CAPN1-211ENST00000527739 ILDR2Q71H61 639 aa29.91■■■□□ 2.38
CAPN1-211ENST00000527739 FBXO31Q5XUX0 539 aaPredicted RBP29.9■■■□□ 2.38
CAPN1-211ENST00000527739 A2ML1A8K2U0 1454 aa29.9■■■□□ 2.38
CAPN1-211ENST00000527739 DNMT1P26358 1616 aaKnown RBP29.89■■■□□ 2.38
CAPN1-211ENST00000527739 RRP7BPQ9NSQ0 103 aa29.89■■■□□ 2.38
CAPN1-211ENST00000527739 FGD6Q6ZV73 1430 aa29.88■■■□□ 2.37
CAPN1-211ENST00000527739 CHIC2Q9UKJ5 165 aa29.86■■■□□ 2.37
CAPN1-211ENST00000527739 ABCC5O15440 1437 aa29.86■■■□□ 2.37
CAPN1-211ENST00000527739 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
CAPN1-211ENST00000527739 PTPN23Q9H3S7 1636 aa29.85■■■□□ 2.37
CAPN1-211ENST00000527739 FAM50AQ14320 339 aaKnown RBP29.85■■■□□ 2.37
CAPN1-211ENST00000527739 KDM5DQ9BY66 1539 aa29.84■■■□□ 2.37
CAPN1-211ENST00000527739 TNRQ92752 1358 aa29.83■■■□□ 2.37
CAPN1-211ENST00000527739 PZPP20742 1482 aa29.81■■■□□ 2.36
CAPN1-211ENST00000527739 KIF15Q9NS87 1388 aa29.81■■■□□ 2.36
CAPN1-211ENST00000527739 DAPK1P53355 1430 aa29.8■■■□□ 2.36
CAPN1-211ENST00000527739 SPATA31D1Q6ZQQ2 1576 aa29.79■■■□□ 2.36
CAPN1-211ENST00000527739 UBAP1LF5GYI3 381 aa29.79■■■□□ 2.36
CAPN1-211ENST00000527739 NEURL4Q96JN8 1562 aa29.77■■■□□ 2.36
CAPN1-211ENST00000527739 FAM135AQ9P2D6 1515 aa29.76■■■□□ 2.36
CAPN1-211ENST00000527739 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.35
CAPN1-211ENST00000527739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.76■■■□□ 2.352e-6■■■□□ 14.7
CAPN1-211ENST00000527739 DUOX2Q9NRD8 1548 aa29.76■■■□□ 2.35
CAPN1-211ENST00000527739 SHANK2Q9UPX8 1470 aa29.74■■■□□ 2.35
CAPN1-211ENST00000527739 POLR1AO95602 1720 aaPredicted RBP29.74■■■□□ 2.35
CAPN1-211ENST00000527739 ANKRD30AQ9BXX3 1397 aa29.73■■■□□ 2.35
CAPN1-211ENST00000527739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.71■■■□□ 2.35
CAPN1-211ENST00000527739 RNF17Q9BXT8 1623 aaKnown RBP29.67■■■□□ 2.34
CAPN1-211ENST00000527739 ERBINQ96RT1 1412 aa29.67■■■□□ 2.34
CAPN1-211ENST00000527739 EIF2AK4Q9P2K8 1649 aaKnown RBP29.67■■■□□ 2.34
CAPN1-211ENST00000527739 ABCC3O15438 1527 aa29.66■■■□□ 2.34
CAPN1-211ENST00000527739 NLRP1Q9C000 1473 aa29.66■■■□□ 2.34
CAPN1-211ENST00000527739 UGGT1Q9NYU2 1555 aa29.65■■■□□ 2.34
CAPN1-211ENST00000527739 SOCS7O14512 581 aa29.65■■■□□ 2.34
CAPN1-211ENST00000527739 CROCC2H7BZ55 1655 aa29.65■■■□□ 2.34
CAPN1-211ENST00000527739 ANKLE2Q86XL3 938 aa29.64■■■□□ 2.34
CAPN1-211ENST00000527739 THEMISQ8N1K5 641 aaPredicted RBP29.63■■■□□ 2.33
CAPN1-211ENST00000527739 MROH1Q8NDA8 1641 aa29.62■■■□□ 2.33
CAPN1-211ENST00000527739 KANK1Q14678 1352 aa29.62■■■□□ 2.33
CAPN1-211ENST00000527739 VWDEQ8N2E2 1590 aa29.6■■■□□ 2.33
CAPN1-211ENST00000527739 CPS1P31327 1500 aa29.6■■■□□ 2.33
CAPN1-211ENST00000527739 ZC3H13Q5T200 1668 aaKnown RBP29.59■■■□□ 2.33
CAPN1-211ENST00000527739 NPHP4O75161 1426 aaPredicted RBP29.58■■■□□ 2.33
CAPN1-211ENST00000527739 MED14O60244 1454 aa29.57■■■□□ 2.32
CAPN1-211ENST00000527739 ITGAEP38570 1179 aa29.57■■■□□ 2.32
CAPN1-211ENST00000527739 DEPDC5O75140 1603 aa29.56■■■□□ 2.32
CAPN1-211ENST00000527739 ERVK-7P63135 1459 aa29.56■■■□□ 2.32
CAPN1-211ENST00000527739 CEP152O94986 1710 aa29.56■■■□□ 2.32
CAPN1-211ENST00000527739 SCAF1Q9H7N4 1312 aaKnown RBP29.55■■■□□ 2.32
CAPN1-211ENST00000527739 PIP4K2BP78356 416 aa29.55■■■□□ 2.32
CAPN1-211ENST00000527739 HSPA1LP34931 641 aa29.52■■■□□ 2.32
CAPN1-211ENST00000527739 IQGAP1P46940 1657 aa29.51■■■□□ 2.31
CAPN1-211ENST00000527739 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
CAPN1-211ENST00000527739 ADGRL2O95490 1459 aa29.5■■■□□ 2.31
CAPN1-211ENST00000527739 CFAP65Q6ZU64 1925 aaKnown RBP29.49■■■□□ 2.31
CAPN1-211ENST00000527739 ANKRD50Q9ULJ7 1429 aa29.48■■■□□ 2.31
CAPN1-211ENST00000527739 TOM1O60784 492 aa29.48■■■□□ 2.31
CAPN1-211ENST00000527739 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
CAPN1-211ENST00000527739 STRCP1A6NGW2 1772 aa29.47■■■□□ 2.31
CAPN1-211ENST00000527739 ALKQ9UM73 1620 aa29.47■■■□□ 2.31
CAPN1-211ENST00000527739 UBR1Q8IWV7 1749 aa29.45■■■□□ 2.31
CAPN1-211ENST00000527739 STAG3Q9UJ98 1225 aa29.45■■■□□ 2.31
CAPN1-211ENST00000527739 LRRC7Q96NW7 1537 aa29.4■■■□□ 2.3
CAPN1-211ENST00000527739 MED1Q15648 1581 aaPredicted RBP29.38■■■□□ 2.29
CAPN1-211ENST00000527739 LTKP29376 864 aa29.37■■■□□ 2.29
CAPN1-211ENST00000527739 LMTK2Q8IWU2 1503 aa29.36■■■□□ 2.29
CAPN1-211ENST00000527739 IDI1Q13907 227 aa29.36■■■□□ 2.29
CAPN1-211ENST00000527739 TXNDC2Q86VQ3 553 aa29.36■■■□□ 2.29
CAPN1-211ENST00000527739 ROCK1Q13464 1354 aa29.36■■■□□ 2.29
CAPN1-211ENST00000527739 SCAF11Q99590 1463 aaKnown RBP29.36■■■□□ 2.29
CAPN1-211ENST00000527739 ARHGAP23Q9P227 1491 aa29.36■■■□□ 2.29
CAPN1-211ENST00000527739 EID1Q9Y6B2 187 aa29.34■■■□□ 2.29
CAPN1-211ENST00000527739 SLIT1O75093 1534 aa29.33■■■□□ 2.29
CAPN1-211ENST00000527739 SYNMO15061 1565 aa29.32■■■□□ 2.28
CAPN1-211ENST00000527739 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
CAPN1-211ENST00000527739 PIK3C2BO00750 1634 aa29.31■■■□□ 2.28
CAPN1-211ENST00000527739 EFCAB6Q5THR3 1501 aa29.27■■■□□ 2.28
CAPN1-211ENST00000527739 SLC52A1Q9NWF4 448 aa29.27■■■□□ 2.28
CAPN1-211ENST00000527739 NUP155O75694 1391 aa29.25■■■□□ 2.27
CAPN1-211ENST00000527739 NOS1P29475 1434 aa29.24■■■□□ 2.27
CAPN1-211ENST00000527739 TMEM2Q9UHN6 1383 aa29.24■■■□□ 2.27
CAPN1-211ENST00000527739 XIRP1Q702N8 1843 aaKnown RBP29.22■■■□□ 2.27
CAPN1-211ENST00000527739 CHGAP10645 457 aaKnown RBP29.21■■■□□ 2.27
CAPN1-211ENST00000527739 BCANQ96GW7 911 aa29.2■■■□□ 2.26
CAPN1-211ENST00000527739 RPRD2Q5VT52 1461 aaKnown RBP29.19■■■□□ 2.26
CAPN1-211ENST00000527739 RRBP1Q9P2E9 1410 aaKnown RBP29.19■■■□□ 2.26
CAPN1-211ENST00000527739 UNC13BO14795 1591 aa29.15■■■□□ 2.26
CAPN1-211ENST00000527739 TET3O43151 1660 aa29.14■■■□□ 2.26
CAPN1-211ENST00000527739 KDM5AP29375 1690 aaKnown RBP29.14■■■□□ 2.26
CAPN1-211ENST00000527739 SLC26A8Q96RN1 970 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms