RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 EIF2AK4Q9P2K8 1649 aaKnown RBP17.26■□□□□ 0.35
CTSB-214ENST00000527243 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
CTSB-214ENST00000527243 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
CTSB-214ENST00000527243 RRBP1Q9P2E9 1410 aaKnown RBP17.26■□□□□ 0.35
CTSB-214ENST00000527243 C3P01024 1663 aa17.26■□□□□ 0.35
CTSB-214ENST00000527243 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
CTSB-214ENST00000527243 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
CTSB-214ENST00000527243 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
CTSB-214ENST00000527243 MROH1Q8NDA8 1641 aa17.24■□□□□ 0.35
CTSB-214ENST00000527243 NPATQ14207 1427 aa17.22■□□□□ 0.35
CTSB-214ENST00000527243 KDM5DQ9BY66 1539 aa17.22■□□□□ 0.35
CTSB-214ENST00000527243 CLTCQ00610 1675 aaKnown RBP17.22■□□□□ 0.35
CTSB-214ENST00000527243 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
CTSB-214ENST00000527243 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
CTSB-214ENST00000527243 ABCC3O15438 1527 aa17.19■□□□□ 0.34
CTSB-214ENST00000527243 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
CTSB-214ENST00000527243 PRDM15P57071 1507 aaPredicted RBP17.18■□□□□ 0.34
CTSB-214ENST00000527243 PZPP20742 1482 aa17.18■□□□□ 0.34
CTSB-214ENST00000527243 DEPDC5O75140 1603 aa17.17■□□□□ 0.34
CTSB-214ENST00000527243 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
CTSB-214ENST00000527243 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
CTSB-214ENST00000527243 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
CTSB-214ENST00000527243 HSPA2P54652 639 aa17.15■□□□□ 0.34
CTSB-214ENST00000527243 VWDEQ8N2E2 1590 aa17.15■□□□□ 0.34
CTSB-214ENST00000527243 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
CTSB-214ENST00000527243 FBXO31Q5XUX0 539 aaPredicted RBP17.13■□□□□ 0.33
CTSB-214ENST00000527243 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
CTSB-214ENST00000527243 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
CTSB-214ENST00000527243 ITGAEP38570 1179 aa17.1■□□□□ 0.33
CTSB-214ENST00000527243 TNRQ92752 1358 aa17.1■□□□□ 0.33
CTSB-214ENST00000527243 SPATA31D1Q6ZQQ2 1576 aa17.08■□□□□ 0.32
CTSB-214ENST00000527243 CEP152O94986 1710 aa17.07■□□□□ 0.32
CTSB-214ENST00000527243 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
CTSB-214ENST00000527243 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
CTSB-214ENST00000527243 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
CTSB-214ENST00000527243 KANK1Q14678 1352 aa17.07■□□□□ 0.32
CTSB-214ENST00000527243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
CTSB-214ENST00000527243 ZNF142P52746 1687 aaPredicted RBP17.06■□□□□ 0.32
CTSB-214ENST00000527243 UNC13BO14795 1591 aa17.06■□□□□ 0.32
CTSB-214ENST00000527243 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
CTSB-214ENST00000527243 CEP170BQ9Y4F5 1589 aaPredicted RBP17.05■□□□□ 0.32
CTSB-214ENST00000527243 NAIPQ13075 1403 aa17.04■□□□□ 0.32
CTSB-214ENST00000527243 NLRP1Q9C000 1473 aa17.03■□□□□ 0.32
CTSB-214ENST00000527243 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.32
CTSB-214ENST00000527243 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
CTSB-214ENST00000527243 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
CTSB-214ENST00000527243 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
CTSB-214ENST00000527243 NOS1P29475 1434 aa17■□□□□ 0.31
CTSB-214ENST00000527243 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
CTSB-214ENST00000527243 TET3O43151 1660 aa16.97■□□□□ 0.31
CTSB-214ENST00000527243 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
CTSB-214ENST00000527243 NUP155O75694 1391 aa16.97■□□□□ 0.31
CTSB-214ENST00000527243 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
CTSB-214ENST00000527243 PTPRTO14522 1441 aa16.96■□□□□ 0.31
CTSB-214ENST00000527243 SYNMO15061 1565 aa16.94■□□□□ 0.3
CTSB-214ENST00000527243 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
CTSB-214ENST00000527243 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
CTSB-214ENST00000527243 PKD2Q13563 968 aa16.93■□□□□ 0.3
CTSB-214ENST00000527243 NCKAP5LQ9HCH0 1330 aa16.93■□□□□ 0.3
CTSB-214ENST00000527243 IDI1Q13907 227 aa16.92■□□□□ 0.3
CTSB-214ENST00000527243 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
CTSB-214ENST00000527243 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
CTSB-214ENST00000527243 E9PCH4 1651 aa16.9■□□□□ 0.3
CTSB-214ENST00000527243 ARHGAP23Q9P227 1491 aa16.89■□□□□ 0.29
CTSB-214ENST00000527243 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
CTSB-214ENST00000527243 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
CTSB-214ENST00000527243 UBR1Q8IWV7 1749 aa16.88■□□□□ 0.29
CTSB-214ENST00000527243 MED14O60244 1454 aa16.87■□□□□ 0.29
CTSB-214ENST00000527243 SLIT1O75093 1534 aa16.87■□□□□ 0.29
CTSB-214ENST00000527243 PIK3C2BO00750 1634 aa16.87■□□□□ 0.29
CTSB-214ENST00000527243 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
CTSB-214ENST00000527243 KDM5AP29375 1690 aaKnown RBP16.85■□□□□ 0.29
CTSB-214ENST00000527243 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
CTSB-214ENST00000527243 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
CTSB-214ENST00000527243 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
CTSB-214ENST00000527243 LTKP29376 864 aa16.82■□□□□ 0.28
CTSB-214ENST00000527243 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
CTSB-214ENST00000527243 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
CTSB-214ENST00000527243 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
CTSB-214ENST00000527243 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
CTSB-214ENST00000527243 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
CTSB-214ENST00000527243 TMEM131LA2VDJ0 1609 aa16.79■□□□□ 0.28
CTSB-214ENST00000527243 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
CTSB-214ENST00000527243 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
CTSB-214ENST00000527243 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
CTSB-214ENST00000527243 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
CTSB-214ENST00000527243 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.28
CTSB-214ENST00000527243 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
CTSB-214ENST00000527243 TRPM2O94759 1503 aa16.77■□□□□ 0.28
CTSB-214ENST00000527243 CERKQ8TCT0 537 aa16.77■□□□□ 0.28
CTSB-214ENST00000527243 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
CTSB-214ENST00000527243 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
CTSB-214ENST00000527243 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
CTSB-214ENST00000527243 IQGAP1P46940 1657 aa16.75■□□□□ 0.27
CTSB-214ENST00000527243 HRCP23327 699 aa16.74■□□□□ 0.27
CTSB-214ENST00000527243 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
CTSB-214ENST00000527243 RIMS2Q9UQ26 1411 aa16.73■□□□□ 0.27
CTSB-214ENST00000527243 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
CTSB-214ENST00000527243 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
CTSB-214ENST00000527243 FOXD1Q16676 465 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms