RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 MS4A3Q96HJ5 214 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 GDPD2Q9HCC8 539 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 UNCXA6NJT0 531 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 GNPATO15228 680 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 PDCD7Q8N8D1 485 aaKnown RBP2.42□□□□□ -2.02
KNL1-203ENST00000526913 A6NJR5 290 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 KIF3CO14782 793 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 MTMR14Q8NCE2 650 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 LIMD1Q9UGP4 676 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 SCNN1AP37088 669 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 MFAP1P55081 439 aaKnown RBP2.42□□□□□ -2.02
KNL1-203ENST00000526913 SMYD5Q6GMV2 418 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 PIP4P2Q8N4L2 257 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 DDRGK1Q96HY6 314 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 MINK1Q8N4C8 1332 aaPredicted RBP2.42□□□□□ -2.02
KNL1-203ENST00000526913 MICALL2Q8IY33 904 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.42□□□□□ -2.02
KNL1-203ENST00000526913 QPCTQ16769 361 aa2.42□□□□□ -2.02
KNL1-203ENST00000526913 PLPP6Q8IY26 295 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 NOM1Q5C9Z4 860 aaKnown RBP2.41□□□□□ -2.02
KNL1-203ENST00000526913 MYSM1Q5VVJ2 828 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 BEGAINQ9BUH8 593 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 TBC1D2BQ9UPU7 963 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 TTLL13PA6NNM8 815 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 FOXK1P85037 733 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 TRAIPQ9BWF2 469 aa2.41□□□□□ -2.02
KNL1-203ENST00000526913 RFX1P22670 979 aa2.4□□□□□ -2.02
KNL1-203ENST00000526913 FLIIQ13045 1269 aa2.4□□□□□ -2.03
KNL1-203ENST00000526913 HLA-CQ95604 372 aa2.4□□□□□ -2.03
KNL1-203ENST00000526913 EPS8L1Q8TE68 723 aa2.4□□□□□ -2.03
KNL1-203ENST00000526913 HMX1Q9NP08 348 aaPredicted RBP2.4□□□□□ -2.03
KNL1-203ENST00000526913 BMP2KQ9NSY1 1161 aaPredicted RBP2.4□□□□□ -2.03
KNL1-203ENST00000526913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.39□□□□□ -2.031e-6■■■■□ 23.8
KNL1-203ENST00000526913 GALR2O43603 387 aaPredicted RBP2.39□□□□□ -2.03
KNL1-203ENST00000526913 SSTR3P32745 418 aaPredicted RBP2.39□□□□□ -2.03
KNL1-203ENST00000526913 CSPP1Q1MSJ5 1256 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 GLMNQ92990 594 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 RBM33Q96EV2 1170 aaKnown RBP2.39□□□□□ -2.03
KNL1-203ENST00000526913 ZRANB1Q9UGI0 708 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 RFC5P40937 340 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 SRPK2P78362 688 aaKnown RBP2.39□□□□□ -2.03
KNL1-203ENST00000526913 SH3D19Q5HYK7 790 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 GOPCQ9HD26 462 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 HIC1Q14526 733 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 CDCA8Q53HL2 280 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 TRIM35Q9UPQ4 493 aa2.39□□□□□ -2.03
KNL1-203ENST00000526913 ZNF330Q9Y3S2 320 aaPredicted RBP2.39□□□□□ -2.03
KNL1-203ENST00000526913 PCDHB15Q9Y5E8 787 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 CFAP70Q5T0N1 1121 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 FAM217BQ9NTX9 383 aaPredicted RBP2.38□□□□□ -2.03
KNL1-203ENST00000526913 TBC1D12O60347 775 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 UCN2Q96RP3 112 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 SLAIN2Q9P270 581 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 NDUFV2P19404 249 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 TMCO4Q5TGY1 634 aa2.38□□□□□ -2.03
KNL1-203ENST00000526913 METTL3Q86U44 580 aaKnown RBP2.38□□□□□ -2.03
KNL1-203ENST00000526913 ABL2P42684 1182 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 PCMTD1Q96MG8 357 aaPredicted RBP2.37□□□□□ -2.03
KNL1-203ENST00000526913 FAM198AQ9UFP1 575 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 MAP3K9P80192 1104 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 TMEM121BQ9BXQ6 578 aaPredicted RBP2.37□□□□□ -2.03
KNL1-203ENST00000526913 CD44P16070 742 aaKnown RBP2.37□□□□□ -2.03
KNL1-203ENST00000526913 GUCA2AQ02747 115 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 RTL5Q5HYW3 569 aaPredicted RBP2.37□□□□□ -2.03
KNL1-203ENST00000526913 GJD4Q96KN9 370 aaPredicted RBP2.37□□□□□ -2.03
KNL1-203ENST00000526913 EVI5O60447 810 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 FCHSD2O94868 740 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 SKIV2LQ15477 1246 aaKnown RBP2.37□□□□□ -2.03
KNL1-203ENST00000526913 CABLES1Q8TDN4 633 aa2.37□□□□□ -2.03
KNL1-203ENST00000526913 ATN1P54259 1190 aaPredicted RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 TAGLNQ01995 201 aaKnown RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 KHSRPQ92945 711 aaKnown RBP eCLIP2.36□□□□□ -2.038e-7■■□□□ 12.2
KNL1-203ENST00000526913 TBC1D2Q9BYX2 928 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 GPCPD1Q9NPB8 672 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 PCDHGA10Q9Y5H3 936 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 TMEM88BA6NKF7 163 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 PADI6Q6TGC4 694 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 COLQQ9Y215 455 aaPredicted RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 PELP1Q8IZL8 1130 aaKnown RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 KIAA1522Q9P206 1035 aaPredicted RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 ATP1B4Q9UN42 357 aaPredicted RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 VAC14Q08AM6 782 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 ASTLQ6HA08 431 aaPredicted RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 FBXW7Q969H0 707 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 CCDC97Q96F63 343 aaPredicted RBP2.36□□□□□ -2.03
KNL1-203ENST00000526913 IVNS1ABPQ9Y6Y0 642 aa2.36□□□□□ -2.03
KNL1-203ENST00000526913 CLK2P49760 499 aaKnown RBP2.35□□□□□ -2.03
KNL1-203ENST00000526913 PHLDB3Q6NSJ2 640 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 IRX5P78411 483 aaPredicted RBP2.35□□□□□ -2.03
KNL1-203ENST00000526913 CALR3Q96L12 384 aaKnown RBP2.35□□□□□ -2.03
KNL1-203ENST00000526913 SERPINA10Q9UK55 444 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 MOXD2PA6NHM9 499 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 SPDYE16A6NNV3 312 aaPredicted RBP2.35□□□□□ -2.03
KNL1-203ENST00000526913 PTGER2P43116 358 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 EN1Q05925 392 aaPredicted RBP2.35□□□□□ -2.03
KNL1-203ENST00000526913 CHRDL2Q6WN34 429 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 GOLGA2Q08379 1002 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 HDGFL1Q5TGJ6 251 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 TMC2Q8TDI7 906 aa2.35□□□□□ -2.03
KNL1-203ENST00000526913 TRIM34Q9BYJ4 488 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms