RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 SMARCA4P51532 1647 aa10.58□□□□□ -0.72
SF3B2-205ENST00000526653 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
SF3B2-205ENST00000526653 FOSBP53539 338 aa10.57□□□□□ -0.72
SF3B2-205ENST00000526653 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
SF3B2-205ENST00000526653 TK2O00142 265 aa10.56□□□□□ -0.72
SF3B2-205ENST00000526653 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
SF3B2-205ENST00000526653 BCL2L12Q9HB09 334 aa10.54□□□□□ -0.72
SF3B2-205ENST00000526653 HRO43593 1189 aa10.53□□□□□ -0.72
SF3B2-205ENST00000526653 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
SF3B2-205ENST00000526653 KCNH8Q96L42 1107 aa10.53□□□□□ -0.72
SF3B2-205ENST00000526653 WDR62O43379 1518 aa10.53□□□□□ -0.72
SF3B2-205ENST00000526653 RIMBP3CA6NJZ7 1639 aa10.52□□□□□ -0.73
SF3B2-205ENST00000526653 RIMBP3BA6NNM3 1639 aa10.52□□□□□ -0.73
SF3B2-205ENST00000526653 RIMBP3Q9UFD9 1639 aa10.52□□□□□ -0.73
SF3B2-205ENST00000526653 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-205ENST00000526653 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
SF3B2-205ENST00000526653 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
SF3B2-205ENST00000526653 PTPREP23469 700 aa10.49□□□□□ -0.73
SF3B2-205ENST00000526653 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
SF3B2-205ENST00000526653 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
SF3B2-205ENST00000526653 CEP164Q9UPV0 1460 aa10.48□□□□□ -0.73
SF3B2-205ENST00000526653 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
SF3B2-205ENST00000526653 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
SF3B2-205ENST00000526653 DPYSL4O14531 572 aa10.46□□□□□ -0.73
SF3B2-205ENST00000526653 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-205ENST00000526653 PCDHGA10Q9Y5H3 936 aa10.46□□□□□ -0.73
SF3B2-205ENST00000526653 FANCD2Q9BXW9 1451 aa10.46□□□□□ -0.74
SF3B2-205ENST00000526653 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
SF3B2-205ENST00000526653 CFAP44Q96MT7 982 aa10.45□□□□□ -0.74
SF3B2-205ENST00000526653 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
SF3B2-205ENST00000526653 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
SF3B2-205ENST00000526653 ZBED2Q9BTP6 218 aa10.44□□□□□ -0.74
SF3B2-205ENST00000526653 HCSTQ9UBK5 93 aa10.43□□□□□ -0.74
SF3B2-205ENST00000526653 PHF14O94880 888 aa10.42□□□□□ -0.74
SF3B2-205ENST00000526653 KCTD12Q96CX2 325 aaKnown RBP10.42□□□□□ -0.74
SF3B2-205ENST00000526653 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
SF3B2-205ENST00000526653 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
SF3B2-205ENST00000526653 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
SF3B2-205ENST00000526653 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
SF3B2-205ENST00000526653 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
SF3B2-205ENST00000526653 PPP1R3GB7ZBB8 358 aa10.37□□□□□ -0.75
SF3B2-205ENST00000526653 COL9A1P20849 921 aa10.37□□□□□ -0.75
SF3B2-205ENST00000526653 ARAP1Q96P48 1450 aa10.36□□□□□ -0.75
SF3B2-205ENST00000526653 DDX12PQ92771 950 aa10.35□□□□□ -0.75
SF3B2-205ENST00000526653 EPAS1Q99814 870 aa10.35□□□□□ -0.75
SF3B2-205ENST00000526653 PROX2Q3B8N5 592 aa10.34□□□□□ -0.75
SF3B2-205ENST00000526653 MRPL50Q8N5N7 158 aaKnown RBP10.34□□□□□ -0.75
SF3B2-205ENST00000526653 CFTRP13569 1480 aa10.34□□□□□ -0.75
SF3B2-205ENST00000526653 PDIA6Q15084 440 aa10.33□□□□□ -0.76
SF3B2-205ENST00000526653 E2F4Q16254 413 aa10.33□□□□□ -0.76
SF3B2-205ENST00000526653 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
SF3B2-205ENST00000526653 GOLGA8CPA6NN73 597 aa10.32□□□□□ -0.76
SF3B2-205ENST00000526653 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
SF3B2-205ENST00000526653 PTPN5P54829 565 aa10.31□□□□□ -0.76
SF3B2-205ENST00000526653 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
SF3B2-205ENST00000526653 NBPF3Q9H094 633 aa10.31□□□□□ -0.76
SF3B2-205ENST00000526653 WDR70Q9NW82 654 aa10.31□□□□□ -0.76
SF3B2-205ENST00000526653 THSD4Q6ZMP0 1018 aa10.3□□□□□ -0.76
SF3B2-205ENST00000526653 WNT2BQ93097 391 aa10.3□□□□□ -0.76
SF3B2-205ENST00000526653 RABGEF1Q9UJ41 708 aa10.3□□□□□ -0.76
SF3B2-205ENST00000526653 AQRO60306 1485 aaKnown RBP eCLIP10.3□□□□□ -0.769e-9■■■■□ 21.7
SF3B2-205ENST00000526653 IFT140Q96RY7 1462 aa10.3□□□□□ -0.76
SF3B2-205ENST00000526653 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-205ENST00000526653 NBR1Q14596 966 aa10.28□□□□□ -0.76
SF3B2-205ENST00000526653 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
SF3B2-205ENST00000526653 WIZO95785 1651 aa10.26□□□□□ -0.77
SF3B2-205ENST00000526653 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
SF3B2-205ENST00000526653 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
SF3B2-205ENST00000526653 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
SF3B2-205ENST00000526653 CHMP7Q8WUX9 453 aaPredicted RBP10.25□□□□□ -0.77
SF3B2-205ENST00000526653 RSF1Q96T23 1441 aaPredicted RBP10.24□□□□□ -0.77
SF3B2-205ENST00000526653 MAP3K7O43318 606 aa10.24□□□□□ -0.77
SF3B2-205ENST00000526653 TRIM6-TRIM34B2RNG4 842 aa10.23□□□□□ -0.77
SF3B2-205ENST00000526653 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
SF3B2-205ENST00000526653 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
SF3B2-205ENST00000526653 LAPTM4BQ86VI4 370 aa10.22□□□□□ -0.77
SF3B2-205ENST00000526653 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
SF3B2-205ENST00000526653 PRIM1P49642 420 aaKnown RBP10.21□□□□□ -0.77
SF3B2-205ENST00000526653 SEPT9Q9UHD8 586 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-205ENST00000526653 TDRD9Q8NDG6 1382 aaKnown RBP10.2□□□□□ -0.78
SF3B2-205ENST00000526653 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
SF3B2-205ENST00000526653 TOPBP1Q92547 1522 aa10.18□□□□□ -0.78
SF3B2-205ENST00000526653 BCAMP50895 628 aa10.18□□□□□ -0.78
SF3B2-205ENST00000526653 ZFRQ96KR1 1074 aaKnown RBP10.18□□□□□ -0.78
SF3B2-205ENST00000526653 TSKSQ9UJT2 592 aa10.17□□□□□ -0.78
SF3B2-205ENST00000526653 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
SF3B2-205ENST00000526653 OSBPP22059 807 aa10.16□□□□□ -0.78
SF3B2-205ENST00000526653 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
SF3B2-205ENST00000526653 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
SF3B2-205ENST00000526653 PACS2Q86VP3 889 aa10.14□□□□□ -0.79
SF3B2-205ENST00000526653 CDCA7LQ96GN5 454 aa10.14□□□□□ -0.79
SF3B2-205ENST00000526653 PRSS12P56730 875 aa10.13□□□□□ -0.79
SF3B2-205ENST00000526653 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
SF3B2-205ENST00000526653 CHD1O14646 1710 aa10.13□□□□□ -0.79
SF3B2-205ENST00000526653 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
SF3B2-205ENST00000526653 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
SF3B2-205ENST00000526653 RAD54L2Q9Y4B4 1467 aa10.11□□□□□ -0.79
SF3B2-205ENST00000526653 ABCC8Q09428 1581 aa10.11□□□□□ -0.79
SF3B2-205ENST00000526653 SOGA1O94964 1423 aa10.11□□□□□ -0.79
SF3B2-205ENST00000526653 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms