RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 KDM5DQ9BY66 1539 aa17.7■□□□□ 0.42
CTSB-212ENST00000526645 RTEL1-TNFRSF6BF6WH68 1400 aa17.7■□□□□ 0.42
CTSB-212ENST00000526645 PZPP20742 1482 aa17.69■□□□□ 0.42
CTSB-212ENST00000526645 TNRQ92752 1358 aa17.69■□□□□ 0.42
CTSB-212ENST00000526645 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
CTSB-212ENST00000526645 VWDEQ8N2E2 1590 aa17.69■□□□□ 0.42
CTSB-212ENST00000526645 DEPDC5O75140 1603 aa17.69■□□□□ 0.42
CTSB-212ENST00000526645 MED14O60244 1454 aa17.67■□□□□ 0.42
CTSB-212ENST00000526645 NLRP1Q9C000 1473 aa17.67■□□□□ 0.42
CTSB-212ENST00000526645 SYNMO15061 1565 aa17.66■□□□□ 0.42
CTSB-212ENST00000526645 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
CTSB-212ENST00000526645 ALKQ9UM73 1620 aa17.65■□□□□ 0.42
CTSB-212ENST00000526645 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
CTSB-212ENST00000526645 ANKLE2Q86XL3 938 aa17.64■□□□□ 0.41
CTSB-212ENST00000526645 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
CTSB-212ENST00000526645 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
CTSB-212ENST00000526645 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
CTSB-212ENST00000526645 MTUS2Q5JR59 1369 aa17.63■□□□□ 0.41
CTSB-212ENST00000526645 NPHP4O75161 1426 aaPredicted RBP17.63■□□□□ 0.41
CTSB-212ENST00000526645 IQGAP1P46940 1657 aa17.62■□□□□ 0.41
CTSB-212ENST00000526645 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
CTSB-212ENST00000526645 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
CTSB-212ENST00000526645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■□□□ 11.9
CTSB-212ENST00000526645 MIA2Q96PC5 1412 aa17.6■□□□□ 0.41
CTSB-212ENST00000526645 CCDC141Q6ZP82 1450 aa17.58■□□□□ 0.41
CTSB-212ENST00000526645 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
CTSB-212ENST00000526645 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
CTSB-212ENST00000526645 WASHC2CQ9Y4E1 1318 aa17.56■□□□□ 0.4
CTSB-212ENST00000526645 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
CTSB-212ENST00000526645 KIF3BO15066 747 aa17.56■□□□□ 0.4
CTSB-212ENST00000526645 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
CTSB-212ENST00000526645 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
CTSB-212ENST00000526645 STRCP1A6NGW2 1772 aa17.54■□□□□ 0.4
CTSB-212ENST00000526645 RSPH4AQ5TD94 716 aa17.52■□□□□ 0.4
CTSB-212ENST00000526645 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
CTSB-212ENST00000526645 ARHGEF5Q12774 1597 aa17.49■□□□□ 0.39
CTSB-212ENST00000526645 CHIC1Q5VXU3 224 aa17.49■□□□□ 0.39
CTSB-212ENST00000526645 ABCC3O15438 1527 aa17.48■□□□□ 0.39
CTSB-212ENST00000526645 EIF2AK4Q9P2K8 1649 aaKnown RBP17.47■□□□□ 0.39
CTSB-212ENST00000526645 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
CTSB-212ENST00000526645 UBR1Q8IWV7 1749 aa17.47■□□□□ 0.39
CTSB-212ENST00000526645 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
CTSB-212ENST00000526645 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
CTSB-212ENST00000526645 MAST1Q9Y2H9 1570 aa17.43■□□□□ 0.38
CTSB-212ENST00000526645 SLIT1O75093 1534 aa17.42■□□□□ 0.38
CTSB-212ENST00000526645 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CTSB-212ENST00000526645 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
CTSB-212ENST00000526645 ARHGAP23Q9P227 1491 aa17.42■□□□□ 0.38
CTSB-212ENST00000526645 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
CTSB-212ENST00000526645 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
CTSB-212ENST00000526645 XIRP1Q702N8 1843 aaKnown RBP17.41■□□□□ 0.38
CTSB-212ENST00000526645 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
CTSB-212ENST00000526645 MROH1Q8NDA8 1641 aa17.39■□□□□ 0.38
CTSB-212ENST00000526645 CEP152O94986 1710 aa17.38■□□□□ 0.37
CTSB-212ENST00000526645 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
CTSB-212ENST00000526645 ARHGAP31Q2M1Z3 1444 aa17.35■□□□□ 0.37
CTSB-212ENST00000526645 KDM5AP29375 1690 aaKnown RBP17.34■□□□□ 0.37
CTSB-212ENST00000526645 PRDM15P57071 1507 aaPredicted RBP17.34■□□□□ 0.37
CTSB-212ENST00000526645 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
CTSB-212ENST00000526645 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
CTSB-212ENST00000526645 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
CTSB-212ENST00000526645 DUOX2Q9NRD8 1548 aa17.32■□□□□ 0.36
CTSB-212ENST00000526645 LTKP29376 864 aa17.31■□□□□ 0.36
CTSB-212ENST00000526645 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
CTSB-212ENST00000526645 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
CTSB-212ENST00000526645 PIK3C2BO00750 1634 aa17.3■□□□□ 0.36
CTSB-212ENST00000526645 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
CTSB-212ENST00000526645 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
CTSB-212ENST00000526645 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
CTSB-212ENST00000526645 NWD1Q149M9 1564 aa17.28■□□□□ 0.36
CTSB-212ENST00000526645 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
CTSB-212ENST00000526645 EFCAB6Q5THR3 1501 aa17.27■□□□□ 0.36
CTSB-212ENST00000526645 CFAP65Q6ZU64 1925 aaKnown RBP17.27■□□□□ 0.35
CTSB-212ENST00000526645 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
CTSB-212ENST00000526645 MYOM3Q5VTT5 1437 aa17.24■□□□□ 0.35
CTSB-212ENST00000526645 KCNA6P17658 529 aa17.24■□□□□ 0.35
CTSB-212ENST00000526645 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
CTSB-212ENST00000526645 TET3O43151 1660 aa17.23■□□□□ 0.35
CTSB-212ENST00000526645 JCADQ9P266 1359 aa17.23■□□□□ 0.35
CTSB-212ENST00000526645 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
CTSB-212ENST00000526645 MSH6P52701 1360 aa17.22■□□□□ 0.35
CTSB-212ENST00000526645 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
CTSB-212ENST00000526645 KIF15Q9NS87 1388 aa17.21■□□□□ 0.35
CTSB-212ENST00000526645 LMTK2Q8IWU2 1503 aa17.21■□□□□ 0.34
CTSB-212ENST00000526645 KANK1Q14678 1352 aa17.2■□□□□ 0.34
CTSB-212ENST00000526645 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
CTSB-212ENST00000526645 ADGRB3O60242 1522 aa17.2■□□□□ 0.34
CTSB-212ENST00000526645 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
CTSB-212ENST00000526645 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
CTSB-212ENST00000526645 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
CTSB-212ENST00000526645 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
CTSB-212ENST00000526645 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
CTSB-212ENST00000526645 SLAIN2Q9P270 581 aa17.14■□□□□ 0.33
CTSB-212ENST00000526645 NOS1P29475 1434 aa17.13■□□□□ 0.33
CTSB-212ENST00000526645 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
CTSB-212ENST00000526645 IDI1Q13907 227 aa17.13■□□□□ 0.33
CTSB-212ENST00000526645 ZNF772Q68DY9 489 aaPredicted RBP17.13■□□□□ 0.33
CTSB-212ENST00000526645 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
CTSB-212ENST00000526645 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
CTSB-212ENST00000526645 LRP6O75581 1613 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms