RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-207ENST00000526480 HAP1P54257 671 aaPredicted RBP11.14□□□□□ -0.63
CSTF3-207ENST00000526480 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
CSTF3-207ENST00000526480 NEO1Q92859 1461 aa11.13□□□□□ -0.63
CSTF3-207ENST00000526480 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
CSTF3-207ENST00000526480 C3P01024 1663 aa11.13□□□□□ -0.63
CSTF3-207ENST00000526480 UHRF1BP1Q6BDS2 1440 aa11.12□□□□□ -0.63
CSTF3-207ENST00000526480 CEBPAP49715 358 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-207ENST00000526480 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
CSTF3-207ENST00000526480 ZMYM4Q5VZL5 1548 aa11.12□□□□□ -0.63
CSTF3-207ENST00000526480 POGZQ7Z3K3 1410 aa11.11□□□□□ -0.63
CSTF3-207ENST00000526480 ZFYVE16Q7Z3T8 1539 aa11.11□□□□□ -0.63
CSTF3-207ENST00000526480 MLECQ14165 292 aa11.11□□□□□ -0.63
CSTF3-207ENST00000526480 PHLDB1Q86UU1 1377 aa11.11□□□□□ -0.63
CSTF3-207ENST00000526480 PYGBP11216 843 aa11.1□□□□□ -0.63
CSTF3-207ENST00000526480 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
CSTF3-207ENST00000526480 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
CSTF3-207ENST00000526480 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-207ENST00000526480 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-207ENST00000526480 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
CSTF3-207ENST00000526480 ALKQ9UM73 1620 aa11.07□□□□□ -0.64
CSTF3-207ENST00000526480 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
CSTF3-207ENST00000526480 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
CSTF3-207ENST00000526480 EFCAB5A4FU69 1503 aa11.07□□□□□ -0.64
CSTF3-207ENST00000526480 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-207ENST00000526480 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
CSTF3-207ENST00000526480 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
CSTF3-207ENST00000526480 SUPT6HQ7KZ85 1726 aaKnown RBP11.06□□□□□ -0.64
CSTF3-207ENST00000526480 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
CSTF3-207ENST00000526480 MAP3K13O43283 966 aa11.05□□□□□ -0.64
CSTF3-207ENST00000526480 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
CSTF3-207ENST00000526480 DENND4BO75064 1496 aaPredicted RBP11.05□□□□□ -0.64
CSTF3-207ENST00000526480 FHOD3Q2V2M9 1422 aa11.04□□□□□ -0.64
CSTF3-207ENST00000526480 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
CSTF3-207ENST00000526480 LCE2DQ5TA82 110 aaPredicted RBP11.04□□□□□ -0.64
CSTF3-207ENST00000526480 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
CSTF3-207ENST00000526480 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
CSTF3-207ENST00000526480 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
CSTF3-207ENST00000526480 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
CSTF3-207ENST00000526480 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
CSTF3-207ENST00000526480 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
CSTF3-207ENST00000526480 CFAP74Q9C0B2 1584 aa11.01□□□□□ -0.65
CSTF3-207ENST00000526480 KIF27Q86VH2 1401 aa11.01□□□□□ -0.65
CSTF3-207ENST00000526480 ARID3CA6NKF2 412 aa11□□□□□ -0.65
CSTF3-207ENST00000526480 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
CSTF3-207ENST00000526480 ATP10BO94823 1461 aa11□□□□□ -0.65
CSTF3-207ENST00000526480 STK25O00506 426 aa10.99□□□□□ -0.65
CSTF3-207ENST00000526480 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
CSTF3-207ENST00000526480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-207ENST00000526480 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-207ENST00000526480 ZNF142P52746 1687 aaPredicted RBP10.97□□□□□ -0.65
CSTF3-207ENST00000526480 MAGI2Q86UL8 1455 aa10.95□□□□□ -0.66
CSTF3-207ENST00000526480 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
CSTF3-207ENST00000526480 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
CSTF3-207ENST00000526480 POTEAQ6S8J7 498 aa10.95□□□□□ -0.66
CSTF3-207ENST00000526480 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
CSTF3-207ENST00000526480 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
CSTF3-207ENST00000526480 C9orf84Q5VXU9 1444 aa10.94□□□□□ -0.66
CSTF3-207ENST00000526480 BCL11BQ9C0K0 894 aaPredicted RBP10.94□□□□□ -0.66
CSTF3-207ENST00000526480 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
CSTF3-207ENST00000526480 STK24Q9Y6E0 443 aa10.93□□□□□ -0.66
CSTF3-207ENST00000526480 MYO3AQ8NEV4 1616 aa10.93□□□□□ -0.66
CSTF3-207ENST00000526480 ATP10AO60312 1499 aa10.93□□□□□ -0.66
CSTF3-207ENST00000526480 POLR1AO95602 1720 aaPredicted RBP10.92□□□□□ -0.66
CSTF3-207ENST00000526480 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
CSTF3-207ENST00000526480 CDAN1Q8IWY9 1227 aa10.91□□□□□ -0.66
CSTF3-207ENST00000526480 TRAPPC8Q9Y2L5 1435 aa10.91□□□□□ -0.66
CSTF3-207ENST00000526480 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
CSTF3-207ENST00000526480 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
CSTF3-207ENST00000526480 MAMSTRQ6ZN01 415 aa10.9□□□□□ -0.66
CSTF3-207ENST00000526480 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
CSTF3-207ENST00000526480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
CSTF3-207ENST00000526480 STRCP1A6NGW2 1772 aa10.89□□□□□ -0.67
CSTF3-207ENST00000526480 DIP2CQ9Y2E4 1556 aa10.89□□□□□ -0.67
CSTF3-207ENST00000526480 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 RAPGEF6Q8TEU7 1601 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 TOM1O60784 492 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
CSTF3-207ENST00000526480 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 MROH2AA6NES4 1674 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 CPS1P31327 1500 aa10.88□□□□□ -0.67
CSTF3-207ENST00000526480 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
CSTF3-207ENST00000526480 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
CSTF3-207ENST00000526480 PLA2R1Q13018 1463 aa10.87□□□□□ -0.67
CSTF3-207ENST00000526480 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
CSTF3-207ENST00000526480 TIE1P35590 1138 aa10.86□□□□□ -0.67
CSTF3-207ENST00000526480 RAPGEF2Q9Y4G8 1499 aa10.86□□□□□ -0.67
CSTF3-207ENST00000526480 CEP170BQ9Y4F5 1589 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-207ENST00000526480 METRNQ9UJH8 293 aa10.85□□□□□ -0.67
CSTF3-207ENST00000526480 REREQ9P2R6 1566 aa10.85□□□□□ -0.67
CSTF3-207ENST00000526480 PSEN1P49768 467 aa10.84□□□□□ -0.67
CSTF3-207ENST00000526480 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
CSTF3-207ENST00000526480 VWDEQ8N2E2 1590 aa10.84□□□□□ -0.67
CSTF3-207ENST00000526480 RNF17Q9BXT8 1623 aaKnown RBP10.84□□□□□ -0.67
CSTF3-207ENST00000526480 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
CSTF3-207ENST00000526480 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
CSTF3-207ENST00000526480 SCAPERQ9BY12 1400 aa10.83□□□□□ -0.68
CSTF3-207ENST00000526480 SHANK2Q9UPX8 1470 aa10.82□□□□□ -0.68
CSTF3-207ENST00000526480 XIRP1Q702N8 1843 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms