RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 NBPF8Q3BBV2 869 aa11.7□□□□□ -0.54
PPFIA1-206ENST00000526262 EID1Q9Y6B2 187 aa11.7□□□□□ -0.54
PPFIA1-206ENST00000526262 PLCH2O75038 1416 aa11.7□□□□□ -0.54
PPFIA1-206ENST00000526262 MORC1Q86VD1 984 aa11.7□□□□□ -0.54
PPFIA1-206ENST00000526262 ANKRD30BQ9BXX2 1392 aa11.7□□□□□ -0.54
PPFIA1-206ENST00000526262 FANCAO15360 1455 aa11.7□□□□□ -0.54
PPFIA1-206ENST00000526262 ASXL2Q76L83 1435 aa11.69□□□□□ -0.54
PPFIA1-206ENST00000526262 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
PPFIA1-206ENST00000526262 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
PPFIA1-206ENST00000526262 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
PPFIA1-206ENST00000526262 TCOF1Q13428 1488 aaKnown RBP11.68□□□□□ -0.54
PPFIA1-206ENST00000526262 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-206ENST00000526262 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
PPFIA1-206ENST00000526262 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
PPFIA1-206ENST00000526262 ABCC2Q92887 1545 aa11.67□□□□□ -0.54
PPFIA1-206ENST00000526262 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
PPFIA1-206ENST00000526262 KIF7Q2M1P5 1343 aa11.66□□□□□ -0.54
PPFIA1-206ENST00000526262 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
PPFIA1-206ENST00000526262 PANK3Q9H999 370 aa11.66□□□□□ -0.54
PPFIA1-206ENST00000526262 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 CCDC136Q96JN2 1154 aa11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 ITSN2Q9NZM3 1697 aa11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 NBPF1Q3BBV0 1214 aa11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
PPFIA1-206ENST00000526262 NLRP13Q86W25 1043 aa11.65□□□□□ -0.55
PPFIA1-206ENST00000526262 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
PPFIA1-206ENST00000526262 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
PPFIA1-206ENST00000526262 CFAP70Q5T0N1 1121 aa11.64□□□□□ -0.55
PPFIA1-206ENST00000526262 TERF2IPQ9NYB0 399 aa11.63□□□□□ -0.55
PPFIA1-206ENST00000526262 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
PPFIA1-206ENST00000526262 MAPK8IP3Q9UPT6 1336 aa11.63□□□□□ -0.55
PPFIA1-206ENST00000526262 MAGI3Q5TCQ9 1506 aa11.62□□□□□ -0.55
PPFIA1-206ENST00000526262 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
PPFIA1-206ENST00000526262 CENPJQ9HC77 1338 aaPredicted RBP11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 SYCP2Q9BX26 1530 aa11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 DENND4BO75064 1496 aaPredicted RBP11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 TMEM132EQ6IEE7 984 aa11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 DHX29Q7Z478 1369 aaKnown RBP11.61□□□□□ -0.55
PPFIA1-206ENST00000526262 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
PPFIA1-206ENST00000526262 TRAPPC8Q9Y2L5 1435 aa11.59□□□□□ -0.55
PPFIA1-206ENST00000526262 RPRD2Q5VT52 1461 aaKnown RBP11.59□□□□□ -0.55
PPFIA1-206ENST00000526262 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
PPFIA1-206ENST00000526262 BCL11AQ9H165 835 aa11.59□□□□□ -0.55
PPFIA1-206ENST00000526262 MAPKBP1O60336 1514 aa11.59□□□□□ -0.55
PPFIA1-206ENST00000526262 SOX12O15370 315 aa11.58□□□□□ -0.56
PPFIA1-206ENST00000526262 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
PPFIA1-206ENST00000526262 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
PPFIA1-206ENST00000526262 ABCA8O94911 1581 aa11.56□□□□□ -0.56
PPFIA1-206ENST00000526262 ERBINQ96RT1 1412 aa11.56□□□□□ -0.56
PPFIA1-206ENST00000526262 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
PPFIA1-206ENST00000526262 RPGRIP1LQ68CZ1 1315 aa11.56□□□□□ -0.56
PPFIA1-206ENST00000526262 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
PPFIA1-206ENST00000526262 U2AF1L5P0DN76 240 aaPredicted RBP11.55□□□□□ -0.56
PPFIA1-206ENST00000526262 U2AF1Q01081 240 aaKnown RBP eCLIP11.55□□□□□ -0.56
PPFIA1-206ENST00000526262 DUOX2Q9NRD8 1548 aa11.55□□□□□ -0.56
PPFIA1-206ENST00000526262 HAP1P54257 671 aaPredicted RBP11.54□□□□□ -0.56
PPFIA1-206ENST00000526262 DNMT1P26358 1616 aaKnown RBP11.54□□□□□ -0.56
PPFIA1-206ENST00000526262 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
PPFIA1-206ENST00000526262 CHD1O14646 1710 aa11.54□□□□□ -0.56
PPFIA1-206ENST00000526262 CGNL1Q0VF96 1302 aa11.54□□□□□ -0.56
PPFIA1-206ENST00000526262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.53□□□□□ -0.56
PPFIA1-206ENST00000526262 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
PPFIA1-206ENST00000526262 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
PPFIA1-206ENST00000526262 LAS1LQ9Y4W2 734 aaKnown RBP11.53□□□□□ -0.56
PPFIA1-206ENST00000526262 KDM5BQ9UGL1 1544 aa11.52□□□□□ -0.57
PPFIA1-206ENST00000526262 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
PPFIA1-206ENST00000526262 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
PPFIA1-206ENST00000526262 A2MP01023 1474 aa11.51□□□□□ -0.57
PPFIA1-206ENST00000526262 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
PPFIA1-206ENST00000526262 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
PPFIA1-206ENST00000526262 IDI1Q13907 227 aa11.5□□□□□ -0.57
PPFIA1-206ENST00000526262 POGZQ7Z3K3 1410 aa11.5□□□□□ -0.57
PPFIA1-206ENST00000526262 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
PPFIA1-206ENST00000526262 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
PPFIA1-206ENST00000526262 FBXO31Q5XUX0 539 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-206ENST00000526262 CABP2Q9NPB3 220 aa11.49□□□□□ -0.57
PPFIA1-206ENST00000526262 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
PPFIA1-206ENST00000526262 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 TEX14Q8IWB6 1497 aa11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 FRAT1Q92837 279 aaPredicted RBP11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 PRAM1Q96QH2 718 aa11.48□□□□□ -0.57
PPFIA1-206ENST00000526262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.47□□□□□ -0.57
PPFIA1-206ENST00000526262 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
PPFIA1-206ENST00000526262 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
PPFIA1-206ENST00000526262 ANP32AP39687 249 aaKnown RBP11.47□□□□□ -0.57
PPFIA1-206ENST00000526262 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
PPFIA1-206ENST00000526262 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.57
PPFIA1-206ENST00000526262 ERCC6L2Q5T890 1561 aa11.46□□□□□ -0.57
PPFIA1-206ENST00000526262 PZPP20742 1482 aa11.46□□□□□ -0.57
PPFIA1-206ENST00000526262 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
PPFIA1-206ENST00000526262 COG3Q96JB2 828 aa11.45□□□□□ -0.58
PPFIA1-206ENST00000526262 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
PPFIA1-206ENST00000526262 MBD5Q9P267 1494 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms