RNA–Protein interactions for RNA: ENST00000526193.5

RBBP4-217, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 4

Gene RBBP4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-217ENST00000526193 PZPP20742 1482 aa13.42□□□□□ -0.26
RBBP4-217ENST00000526193 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
RBBP4-217ENST00000526193 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
RBBP4-217ENST00000526193 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
RBBP4-217ENST00000526193 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
RBBP4-217ENST00000526193 APLP2Q06481 763 aa13.39□□□□□ -0.27
RBBP4-217ENST00000526193 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
RBBP4-217ENST00000526193 ZNF142P52746 1687 aaPredicted RBP13.39□□□□□ -0.27
RBBP4-217ENST00000526193 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
RBBP4-217ENST00000526193 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
RBBP4-217ENST00000526193 CAMSAP1Q5T5Y3 1602 aa13.37□□□□□ -0.27
RBBP4-217ENST00000526193 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
RBBP4-217ENST00000526193 LTBP4Q8N2S1 1624 aa13.36□□□□□ -0.27
RBBP4-217ENST00000526193 TNRQ92752 1358 aa13.36□□□□□ -0.27
RBBP4-217ENST00000526193 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
RBBP4-217ENST00000526193 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
RBBP4-217ENST00000526193 DUOX2Q9NRD8 1548 aa13.35□□□□□ -0.27
RBBP4-217ENST00000526193 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
RBBP4-217ENST00000526193 ARHGAP31Q2M1Z3 1444 aa13.35□□□□□ -0.27
RBBP4-217ENST00000526193 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
RBBP4-217ENST00000526193 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
RBBP4-217ENST00000526193 ABCC5O15440 1437 aa13.33□□□□□ -0.28
RBBP4-217ENST00000526193 FGD6Q6ZV73 1430 aa13.32□□□□□ -0.28
RBBP4-217ENST00000526193 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
RBBP4-217ENST00000526193 MED14O60244 1454 aa13.31□□□□□ -0.28
RBBP4-217ENST00000526193 ABCC3O15438 1527 aa13.31□□□□□ -0.28
RBBP4-217ENST00000526193 FBXO31Q5XUX0 539 aaPredicted RBP13.31□□□□□ -0.28
RBBP4-217ENST00000526193 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
RBBP4-217ENST00000526193 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
RBBP4-217ENST00000526193 SPATA31D1Q6ZQQ2 1576 aa13.3□□□□□ -0.28
RBBP4-217ENST00000526193 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
RBBP4-217ENST00000526193 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
RBBP4-217ENST00000526193 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
RBBP4-217ENST00000526193 DAPK1P53355 1430 aa13.29□□□□□ -0.28
RBBP4-217ENST00000526193 PRDM15P57071 1507 aaPredicted RBP13.28□□□□□ -0.28
RBBP4-217ENST00000526193 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
RBBP4-217ENST00000526193 ADGRL2O95490 1459 aa13.27□□□□□ -0.29
RBBP4-217ENST00000526193 LMTK2Q8IWU2 1503 aa13.27□□□□□ -0.29
RBBP4-217ENST00000526193 PTPN23Q9H3S7 1636 aa13.27□□□□□ -0.29
RBBP4-217ENST00000526193 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
RBBP4-217ENST00000526193 ERVK-7P63135 1459 aa13.26□□□□□ -0.29
RBBP4-217ENST00000526193 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
RBBP4-217ENST00000526193 CPS1P31327 1500 aa13.24□□□□□ -0.29
RBBP4-217ENST00000526193 KANK1Q14678 1352 aa13.24□□□□□ -0.29
RBBP4-217ENST00000526193 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
RBBP4-217ENST00000526193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.23□□□□□ -0.29
RBBP4-217ENST00000526193 RRP7BPQ9NSQ0 103 aa13.23□□□□□ -0.29
RBBP4-217ENST00000526193 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
RBBP4-217ENST00000526193 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
RBBP4-217ENST00000526193 ARHGAP23Q9P227 1491 aa13.22□□□□□ -0.29
RBBP4-217ENST00000526193 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
RBBP4-217ENST00000526193 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.29
RBBP4-217ENST00000526193 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
RBBP4-217ENST00000526193 SLIT1O75093 1534 aa13.21□□□□□ -0.29
RBBP4-217ENST00000526193 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
RBBP4-217ENST00000526193 RPRD2Q5VT52 1461 aaKnown RBP13.2□□□□□ -0.3
RBBP4-217ENST00000526193 NOS1P29475 1434 aa13.19□□□□□ -0.3
RBBP4-217ENST00000526193 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
RBBP4-217ENST00000526193 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
RBBP4-217ENST00000526193 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
RBBP4-217ENST00000526193 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
RBBP4-217ENST00000526193 TOM1O60784 492 aa13.16□□□□□ -0.3
RBBP4-217ENST00000526193 DISP3Q9P2K9 1392 aa13.16□□□□□ -0.3
RBBP4-217ENST00000526193 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
RBBP4-217ENST00000526193 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
RBBP4-217ENST00000526193 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
RBBP4-217ENST00000526193 IDI1Q13907 227 aa13.14□□□□□ -0.31
RBBP4-217ENST00000526193 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
RBBP4-217ENST00000526193 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
RBBP4-217ENST00000526193 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
RBBP4-217ENST00000526193 LTKP29376 864 aa13.12□□□□□ -0.31
RBBP4-217ENST00000526193 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
RBBP4-217ENST00000526193 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
RBBP4-217ENST00000526193 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
RBBP4-217ENST00000526193 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
RBBP4-217ENST00000526193 FAM50AQ14320 339 aaKnown RBP13.11□□□□□ -0.31
RBBP4-217ENST00000526193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.314e-8■■■□□ 17.9
RBBP4-217ENST00000526193 CEP152O94986 1710 aa13.1□□□□□ -0.31
RBBP4-217ENST00000526193 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.31
RBBP4-217ENST00000526193 SYNMO15061 1565 aa13.07□□□□□ -0.32
RBBP4-217ENST00000526193 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
RBBP4-217ENST00000526193 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
RBBP4-217ENST00000526193 TET3O43151 1660 aa13.06□□□□□ -0.32
RBBP4-217ENST00000526193 KCNA6P17658 529 aa13.06□□□□□ -0.32
RBBP4-217ENST00000526193 UNC13BO14795 1591 aa13.06□□□□□ -0.32
RBBP4-217ENST00000526193 SOCS7O14512 581 aa13.05□□□□□ -0.32
RBBP4-217ENST00000526193 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
RBBP4-217ENST00000526193 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
RBBP4-217ENST00000526193 ZFYVE9O95405 1425 aa13.05□□□□□ -0.32
RBBP4-217ENST00000526193 ADGRB3O60242 1522 aa13.04□□□□□ -0.32
RBBP4-217ENST00000526193 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
RBBP4-217ENST00000526193 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
RBBP4-217ENST00000526193 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
RBBP4-217ENST00000526193 PLEKHG1Q9ULL1 1385 aa13.03□□□□□ -0.32
RBBP4-217ENST00000526193 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
RBBP4-217ENST00000526193 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
RBBP4-217ENST00000526193 NKTRP30414 1462 aaKnown RBP13.02□□□□□ -0.33
RBBP4-217ENST00000526193 ALKQ9UM73 1620 aa13.02□□□□□ -0.33
RBBP4-217ENST00000526193 HSPA1LP34931 641 aa13.01□□□□□ -0.33
RBBP4-217ENST00000526193 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms