RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
RPUSD4-202ENST00000525812 DNMT1P26358 1616 aaKnown RBP12□□□□□ -0.49
RPUSD4-202ENST00000525812 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
RPUSD4-202ENST00000525812 HSPA1LP34931 641 aa11.99□□□□□ -0.49
RPUSD4-202ENST00000525812 TNRQ92752 1358 aa11.99□□□□□ -0.49
RPUSD4-202ENST00000525812 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
RPUSD4-202ENST00000525812 ADGBQ8N7X0 1667 aa11.99□□□□□ -0.49
RPUSD4-202ENST00000525812 PZPP20742 1482 aa11.98□□□□□ -0.49
RPUSD4-202ENST00000525812 CEP162Q5TB80 1403 aa11.98□□□□□ -0.49
RPUSD4-202ENST00000525812 KIF3BO15066 747 aa11.98□□□□□ -0.49
RPUSD4-202ENST00000525812 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
RPUSD4-202ENST00000525812 NLRP1Q9C000 1473 aa11.97□□□□□ -0.49
RPUSD4-202ENST00000525812 WASHC2CQ9Y4E1 1318 aa11.96□□□□□ -0.49
RPUSD4-202ENST00000525812 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
RPUSD4-202ENST00000525812 DEPDC5O75140 1603 aa11.93□□□□□ -0.5
RPUSD4-202ENST00000525812 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
RPUSD4-202ENST00000525812 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
RPUSD4-202ENST00000525812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
RPUSD4-202ENST00000525812 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
RPUSD4-202ENST00000525812 VWDEQ8N2E2 1590 aa11.92□□□□□ -0.5
RPUSD4-202ENST00000525812 KDM5DQ9BY66 1539 aa11.92□□□□□ -0.5
RPUSD4-202ENST00000525812 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
RPUSD4-202ENST00000525812 NPHP4O75161 1426 aaPredicted RBP11.92□□□□□ -0.5
RPUSD4-202ENST00000525812 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
RPUSD4-202ENST00000525812 MED1Q15648 1581 aaPredicted RBP11.91□□□□□ -0.5
RPUSD4-202ENST00000525812 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
RPUSD4-202ENST00000525812 UGGT1Q9NYU2 1555 aa11.9□□□□□ -0.5
RPUSD4-202ENST00000525812 ALKQ9UM73 1620 aa11.89□□□□□ -0.51
RPUSD4-202ENST00000525812 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
RPUSD4-202ENST00000525812 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
RPUSD4-202ENST00000525812 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
RPUSD4-202ENST00000525812 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
RPUSD4-202ENST00000525812 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
RPUSD4-202ENST00000525812 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
RPUSD4-202ENST00000525812 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
RPUSD4-202ENST00000525812 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
RPUSD4-202ENST00000525812 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
RPUSD4-202ENST00000525812 PHF23Q9BUL5 403 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-202ENST00000525812 RGS17Q9UGC6 210 aaPredicted RBP11.83□□□□□ -0.52
RPUSD4-202ENST00000525812 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
RPUSD4-202ENST00000525812 ABCC3O15438 1527 aa11.82□□□□□ -0.52
RPUSD4-202ENST00000525812 LTKP29376 864 aa11.82□□□□□ -0.52
RPUSD4-202ENST00000525812 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
RPUSD4-202ENST00000525812 RNF17Q9BXT8 1623 aaKnown RBP11.82□□□□□ -0.52
RPUSD4-202ENST00000525812 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
RPUSD4-202ENST00000525812 SLIT1O75093 1534 aa11.81□□□□□ -0.52
RPUSD4-202ENST00000525812 TXNDC2Q86VQ3 553 aa11.81□□□□□ -0.52
RPUSD4-202ENST00000525812 SCAF11Q99590 1463 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-202ENST00000525812 SYNMO15061 1565 aa11.79□□□□□ -0.52
RPUSD4-202ENST00000525812 EIF2AK4Q9P2K8 1649 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-202ENST00000525812 ZC3H13Q5T200 1668 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-202ENST00000525812 EID1Q9Y6B2 187 aa11.79□□□□□ -0.52
RPUSD4-202ENST00000525812 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
RPUSD4-202ENST00000525812 KCNA6P17658 529 aa11.78□□□□□ -0.52
RPUSD4-202ENST00000525812 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.52
RPUSD4-202ENST00000525812 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.52
RPUSD4-202ENST00000525812 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
RPUSD4-202ENST00000525812 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
RPUSD4-202ENST00000525812 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
RPUSD4-202ENST00000525812 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
RPUSD4-202ENST00000525812 UBR1Q8IWV7 1749 aa11.74□□□□□ -0.53
RPUSD4-202ENST00000525812 IDI1Q13907 227 aa11.74□□□□□ -0.53
RPUSD4-202ENST00000525812 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
RPUSD4-202ENST00000525812 SLC52A1Q9NWF4 448 aa11.73□□□□□ -0.53
RPUSD4-202ENST00000525812 KDM5AP29375 1690 aaKnown RBP11.72□□□□□ -0.53
RPUSD4-202ENST00000525812 VPS8Q8N3P4 1428 aa11.72□□□□□ -0.53
RPUSD4-202ENST00000525812 TET3O43151 1660 aa11.71□□□□□ -0.53
RPUSD4-202ENST00000525812 PRDM15P57071 1507 aaPredicted RBP11.71□□□□□ -0.53
RPUSD4-202ENST00000525812 TMEM94Q12767 1356 aa11.71□□□□□ -0.53
RPUSD4-202ENST00000525812 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
RPUSD4-202ENST00000525812 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
RPUSD4-202ENST00000525812 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
RPUSD4-202ENST00000525812 LMTK2Q8IWU2 1503 aa11.7□□□□□ -0.54
RPUSD4-202ENST00000525812 ABCC5O15440 1437 aa11.7□□□□□ -0.54
RPUSD4-202ENST00000525812 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
RPUSD4-202ENST00000525812 NOS1P29475 1434 aa11.69□□□□□ -0.54
RPUSD4-202ENST00000525812 KANK1Q14678 1352 aa11.69□□□□□ -0.54
RPUSD4-202ENST00000525812 PROSER2Q86WR7 435 aaPredicted RBP11.69□□□□□ -0.54
RPUSD4-202ENST00000525812 XIRP1Q702N8 1843 aaKnown RBP11.68□□□□□ -0.54
RPUSD4-202ENST00000525812 HDGFP51858 240 aaKnown RBP11.68□□□□□ -0.54
RPUSD4-202ENST00000525812 RRP7BPQ9NSQ0 103 aa11.68□□□□□ -0.54
RPUSD4-202ENST00000525812 SLAIN2Q9P270 581 aa11.68□□□□□ -0.54
RPUSD4-202ENST00000525812 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
RPUSD4-202ENST00000525812 TBX22Q9Y458 520 aa11.67□□□□□ -0.54
RPUSD4-202ENST00000525812 NKTRP30414 1462 aaKnown RBP11.67□□□□□ -0.54
RPUSD4-202ENST00000525812 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
RPUSD4-202ENST00000525812 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
RPUSD4-202ENST00000525812 SLC26A8Q96RN1 970 aa11.65□□□□□ -0.54
RPUSD4-202ENST00000525812 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.55
RPUSD4-202ENST00000525812 JCADQ9P266 1359 aa11.65□□□□□ -0.55
RPUSD4-202ENST00000525812 CEP152O94986 1710 aa11.64□□□□□ -0.55
RPUSD4-202ENST00000525812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■■■□□ 15.3
RPUSD4-202ENST00000525812 MSH6P52701 1360 aa11.64□□□□□ -0.55
RPUSD4-202ENST00000525812 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
RPUSD4-202ENST00000525812 PLEKHG1Q9ULL1 1385 aa11.63□□□□□ -0.55
RPUSD4-202ENST00000525812 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
RPUSD4-202ENST00000525812 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
RPUSD4-202ENST00000525812 SPATA31A6Q5VVP1 1343 aa11.62□□□□□ -0.55
RPUSD4-202ENST00000525812 DAPK1P53355 1430 aa11.62□□□□□ -0.55
RPUSD4-202ENST00000525812 FGD6Q6ZV73 1430 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms