RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 FAM135AQ9P2D6 1515 aa12.76□□□□□ -0.37
PABPC4-220ENST00000525669 EIF2AK4Q9P2K8 1649 aaKnown RBP12.76□□□□□ -0.37
PABPC4-220ENST00000525669 DEPDC5O75140 1603 aa12.75□□□□□ -0.37
PABPC4-220ENST00000525669 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
PABPC4-220ENST00000525669 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
PABPC4-220ENST00000525669 MLH3Q9UHC1 1453 aa12.73□□□□□ -0.37
PABPC4-220ENST00000525669 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
PABPC4-220ENST00000525669 CEP152O94986 1710 aa12.73□□□□□ -0.37
PABPC4-220ENST00000525669 MAGI2Q86UL8 1455 aa12.72□□□□□ -0.37
PABPC4-220ENST00000525669 PKD2Q13563 968 aa12.72□□□□□ -0.37
PABPC4-220ENST00000525669 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
PABPC4-220ENST00000525669 A2MP01023 1474 aa12.72□□□□□ -0.37
PABPC4-220ENST00000525669 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.38
PABPC4-220ENST00000525669 E9PCH4 1651 aa12.7□□□□□ -0.38
PABPC4-220ENST00000525669 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
PABPC4-220ENST00000525669 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
PABPC4-220ENST00000525669 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
PABPC4-220ENST00000525669 KIF3BO15066 747 aa12.69□□□□□ -0.38
PABPC4-220ENST00000525669 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
PABPC4-220ENST00000525669 BCORL1Q5H9F3 1711 aa12.68□□□□□ -0.38
PABPC4-220ENST00000525669 COL17A1Q9UMD9 1497 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-220ENST00000525669 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
PABPC4-220ENST00000525669 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
PABPC4-220ENST00000525669 TONSLQ96HA7 1378 aa12.68□□□□□ -0.38
PABPC4-220ENST00000525669 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
PABPC4-220ENST00000525669 TET3O43151 1660 aa12.67□□□□□ -0.38
PABPC4-220ENST00000525669 VWDEQ8N2E2 1590 aa12.66□□□□□ -0.38
PABPC4-220ENST00000525669 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
PABPC4-220ENST00000525669 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
PABPC4-220ENST00000525669 KANK1Q14678 1352 aa12.63□□□□□ -0.39
PABPC4-220ENST00000525669 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
PABPC4-220ENST00000525669 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
PABPC4-220ENST00000525669 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
PABPC4-220ENST00000525669 ATP10AO60312 1499 aa12.61□□□□□ -0.39
PABPC4-220ENST00000525669 PPP1R15AO75807 674 aaPredicted RBP12.61□□□□□ -0.39
PABPC4-220ENST00000525669 GGT6Q6P531 493 aa12.61□□□□□ -0.39
PABPC4-220ENST00000525669 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
PABPC4-220ENST00000525669 PLA2R1Q13018 1463 aa12.6□□□□□ -0.39
PABPC4-220ENST00000525669 EFCAB6Q5THR3 1501 aa12.6□□□□□ -0.39
PABPC4-220ENST00000525669 L3MBTL2Q969R5 705 aa12.59□□□□□ -0.39
PABPC4-220ENST00000525669 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
PABPC4-220ENST00000525669 ABCC3O15438 1527 aa12.58□□□□□ -0.4
PABPC4-220ENST00000525669 ZC3H13Q5T200 1668 aaKnown RBP12.58□□□□□ -0.4
PABPC4-220ENST00000525669 REREQ9P2R6 1566 aa12.58□□□□□ -0.4
PABPC4-220ENST00000525669 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
PABPC4-220ENST00000525669 LMTK2Q8IWU2 1503 aa12.57□□□□□ -0.4
PABPC4-220ENST00000525669 CCDC144AA2RUR9 1427 aa12.56□□□□□ -0.4
PABPC4-220ENST00000525669 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
PABPC4-220ENST00000525669 TRPM2O94759 1503 aa12.56□□□□□ -0.4
PABPC4-220ENST00000525669 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
PABPC4-220ENST00000525669 KIF1BO60333 1816 aa12.55□□□□□ -0.4
PABPC4-220ENST00000525669 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
PABPC4-220ENST00000525669 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
PABPC4-220ENST00000525669 AGLP35573 1532 aa12.53□□□□□ -0.4
PABPC4-220ENST00000525669 MLECQ14165 292 aa12.52□□□□□ -0.41
PABPC4-220ENST00000525669 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
PABPC4-220ENST00000525669 PTPRTO14522 1441 aa12.52□□□□□ -0.41
PABPC4-220ENST00000525669 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
PABPC4-220ENST00000525669 ADRA2BP18089 450 aa12.51□□□□□ -0.41
PABPC4-220ENST00000525669 RGL3Q3MIN7 710 aa12.51□□□□□ -0.41
PABPC4-220ENST00000525669 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
PABPC4-220ENST00000525669 NPATQ14207 1427 aa12.51□□□□□ -0.41
PABPC4-220ENST00000525669 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
PABPC4-220ENST00000525669 PPP6R1Q9UPN7 881 aa12.5□□□□□ -0.41
PABPC4-220ENST00000525669 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
PABPC4-220ENST00000525669 SYNMO15061 1565 aa12.49□□□□□ -0.41
PABPC4-220ENST00000525669 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
PABPC4-220ENST00000525669 MYO5BQ9ULV0 1848 aa12.48□□□□□ -0.41
PABPC4-220ENST00000525669 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
PABPC4-220ENST00000525669 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
PABPC4-220ENST00000525669 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
PABPC4-220ENST00000525669 PIK3C2BO00750 1634 aa12.47□□□□□ -0.41
PABPC4-220ENST00000525669 SPATA31E1Q6ZUB1 1445 aa12.46□□□□□ -0.41
PABPC4-220ENST00000525669 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 PPLO60437 1756 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 NOS1P29475 1434 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 ARHGAP31Q2M1Z3 1444 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 UHRF1BP1Q6BDS2 1440 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 MADDQ8WXG6 1647 aa12.44□□□□□ -0.42
PABPC4-220ENST00000525669 ADGRB3O60242 1522 aa12.43□□□□□ -0.42
PABPC4-220ENST00000525669 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
PABPC4-220ENST00000525669 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
PABPC4-220ENST00000525669 RALGAPBQ86X10 1494 aa12.41□□□□□ -0.42
PABPC4-220ENST00000525669 HSPA5P11021 654 aaKnown RBP12.41□□□□□ -0.42
PABPC4-220ENST00000525669 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
PABPC4-220ENST00000525669 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
PABPC4-220ENST00000525669 NEURL4Q96JN8 1562 aa12.41□□□□□ -0.42
PABPC4-220ENST00000525669 ERVK-7P63135 1459 aa12.4□□□□□ -0.42
PABPC4-220ENST00000525669 C3P01024 1663 aa12.39□□□□□ -0.43
PABPC4-220ENST00000525669 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
PABPC4-220ENST00000525669 TMEM131LA2VDJ0 1609 aa12.39□□□□□ -0.43
PABPC4-220ENST00000525669 POLR1AO95602 1720 aaPredicted RBP12.39□□□□□ -0.43
PABPC4-220ENST00000525669 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
PABPC4-220ENST00000525669 EIF4G2P78344 907 aaKnown RBP eCLIP12.37□□□□□ -0.43
PABPC4-220ENST00000525669 RIMS1Q86UR5 1692 aaKnown RBP12.37□□□□□ -0.43
PABPC4-220ENST00000525669 ZMYM3Q14202 1370 aa12.36□□□□□ -0.43
PABPC4-220ENST00000525669 IDI1Q13907 227 aa12.36□□□□□ -0.43
PABPC4-220ENST00000525669 LAMC1P11047 1609 aa12.36□□□□□ -0.43
PABPC4-220ENST00000525669 ROCK2O75116 1388 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms