RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 DUOX2Q9NRD8 1548 aa27.03■■□□□ 1.92
NR1H3-228ENST00000525441 KIF15Q9NS87 1388 aa27.02■■□□□ 1.92
NR1H3-228ENST00000525441 WASHC2CQ9Y4E1 1318 aa27.01■■□□□ 1.91
NR1H3-228ENST00000525441 KDM5DQ9BY66 1539 aa27■■□□□ 1.91
NR1H3-228ENST00000525441 EIF2AK4Q9P2K8 1649 aaKnown RBP27■■□□□ 1.91
NR1H3-228ENST00000525441 RRP7BPQ9NSQ0 103 aa26.99■■□□□ 1.91
NR1H3-228ENST00000525441 ANKRD30AQ9BXX3 1397 aa26.98■■□□□ 1.91
NR1H3-228ENST00000525441 PTPRKQ15262 1439 aa26.98■■□□□ 1.91
NR1H3-228ENST00000525441 RNF17Q9BXT8 1623 aaKnown RBP26.97■■□□□ 1.91
NR1H3-228ENST00000525441 CHIC2Q9UKJ5 165 aa26.96■■□□□ 1.91
NR1H3-228ENST00000525441 ERBINQ96RT1 1412 aa26.95■■□□□ 1.9
NR1H3-228ENST00000525441 PPARGC1BQ86YN6 1023 aaKnown RBP26.92■■□□□ 1.9
NR1H3-228ENST00000525441 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
NR1H3-228ENST00000525441 PZPP20742 1482 aa26.9■■□□□ 1.9
NR1H3-228ENST00000525441 ADGRL2O95490 1459 aa26.89■■□□□ 1.9
NR1H3-228ENST00000525441 ABCC3O15438 1527 aa26.87■■□□□ 1.89
NR1H3-228ENST00000525441 ZC3H13Q5T200 1668 aaKnown RBP26.87■■□□□ 1.89
NR1H3-228ENST00000525441 DMRT2Q9Y5R5 561 aa26.86■■□□□ 1.89
NR1H3-228ENST00000525441 MROH1Q8NDA8 1641 aa26.85■■□□□ 1.89
NR1H3-228ENST00000525441 MYO3AQ8NEV4 1616 aa26.85■■□□□ 1.89
NR1H3-228ENST00000525441 TNRQ92752 1358 aa26.84■■□□□ 1.89
NR1H3-228ENST00000525441 FBXO31Q5XUX0 539 aaPredicted RBP26.84■■□□□ 1.89
NR1H3-228ENST00000525441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.83■■□□□ 1.88
NR1H3-228ENST00000525441 PRDM15P57071 1507 aaPredicted RBP26.82■■□□□ 1.88
NR1H3-228ENST00000525441 KANK1Q14678 1352 aa26.82■■□□□ 1.88
NR1H3-228ENST00000525441 CEP170BQ9Y4F5 1589 aaPredicted RBP26.81■■□□□ 1.88
NR1H3-228ENST00000525441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.81■■□□□ 1.882e-6■■□□□ 13
NR1H3-228ENST00000525441 ZNF142P52746 1687 aaPredicted RBP26.81■■□□□ 1.88
NR1H3-228ENST00000525441 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
NR1H3-228ENST00000525441 DEPDC5O75140 1603 aa26.78■■□□□ 1.88
NR1H3-228ENST00000525441 STRCQ7RTU9 1775 aa26.78■■□□□ 1.88
NR1H3-228ENST00000525441 CAMSAP1Q5T5Y3 1602 aa26.77■■□□□ 1.88
NR1H3-228ENST00000525441 ANKRD50Q9ULJ7 1429 aa26.77■■□□□ 1.88
NR1H3-228ENST00000525441 CEP152O94986 1710 aa26.76■■□□□ 1.88
NR1H3-228ENST00000525441 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
NR1H3-228ENST00000525441 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
NR1H3-228ENST00000525441 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
NR1H3-228ENST00000525441 PTPRTO14522 1441 aa26.73■■□□□ 1.87
NR1H3-228ENST00000525441 ITGAEP38570 1179 aa26.73■■□□□ 1.87
NR1H3-228ENST00000525441 ARHGAP31Q2M1Z3 1444 aa26.73■■□□□ 1.87
NR1H3-228ENST00000525441 ERVK-7P63135 1459 aa26.72■■□□□ 1.87
NR1H3-228ENST00000525441 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
NR1H3-228ENST00000525441 PKD2Q13563 968 aa26.71■■□□□ 1.87
NR1H3-228ENST00000525441 RRBP1Q9P2E9 1410 aaKnown RBP26.71■■□□□ 1.87
NR1H3-228ENST00000525441 LMTK2Q8IWU2 1503 aa26.68■■□□□ 1.86
NR1H3-228ENST00000525441 VWDEQ8N2E2 1590 aa26.67■■□□□ 1.86
NR1H3-228ENST00000525441 NCKAP5LQ9HCH0 1330 aa26.66■■□□□ 1.86
NR1H3-228ENST00000525441 THEMISQ8N1K5 641 aaPredicted RBP26.66■■□□□ 1.86
NR1H3-228ENST00000525441 UGGT1Q9NYU2 1555 aa26.63■■□□□ 1.85
NR1H3-228ENST00000525441 ILDR1Q86SU0 546 aaPredicted RBP26.63■■□□□ 1.85
NR1H3-228ENST00000525441 CFAP65Q6ZU64 1925 aaKnown RBP26.61■■□□□ 1.85
NR1H3-228ENST00000525441 EFCAB6Q5THR3 1501 aa26.59■■□□□ 1.85
NR1H3-228ENST00000525441 ANKLE2Q86XL3 938 aa26.58■■□□□ 1.85
NR1H3-228ENST00000525441 CERKQ8TCT0 537 aa26.58■■□□□ 1.85
NR1H3-228ENST00000525441 FBXO41Q8TF61 875 aa26.57■■□□□ 1.84
NR1H3-228ENST00000525441 UNC13BO14795 1591 aa26.57■■□□□ 1.84
NR1H3-228ENST00000525441 RPRD2Q5VT52 1461 aaKnown RBP26.54■■□□□ 1.84
NR1H3-228ENST00000525441 TET3O43151 1660 aa26.52■■□□□ 1.84
NR1H3-228ENST00000525441 POLR1AO95602 1720 aaPredicted RBP26.51■■□□□ 1.83
NR1H3-228ENST00000525441 NOS1P29475 1434 aa26.51■■□□□ 1.83
NR1H3-228ENST00000525441 NUP155O75694 1391 aa26.5■■□□□ 1.83
NR1H3-228ENST00000525441 STAG3Q9UJ98 1225 aa26.5■■□□□ 1.83
NR1H3-228ENST00000525441 UBR1Q8IWV7 1749 aa26.48■■□□□ 1.83
NR1H3-228ENST00000525441 NEURL4Q96JN8 1562 aa26.47■■□□□ 1.83
NR1H3-228ENST00000525441 SLC52A1Q9NWF4 448 aa26.47■■□□□ 1.83
NR1H3-228ENST00000525441 GCC2Q8IWJ2 1684 aa26.47■■□□□ 1.83
NR1H3-228ENST00000525441 IQGAP3Q86VI3 1631 aa26.47■■□□□ 1.83
NR1H3-228ENST00000525441 IDI1Q13907 227 aa26.46■■□□□ 1.83
NR1H3-228ENST00000525441 SYNMO15061 1565 aa26.46■■□□□ 1.83
NR1H3-228ENST00000525441 MED14O60244 1454 aa26.45■■□□□ 1.82
NR1H3-228ENST00000525441 LTBP4Q8N2S1 1624 aa26.45■■□□□ 1.82
NR1H3-228ENST00000525441 NPHP4O75161 1426 aaPredicted RBP26.45■■□□□ 1.82
NR1H3-228ENST00000525441 PIK3C2BO00750 1634 aa26.44■■□□□ 1.82
NR1H3-228ENST00000525441 NAIPQ13075 1403 aa26.44■■□□□ 1.82
NR1H3-228ENST00000525441 ZNF335Q9H4Z2 1342 aaPredicted RBP26.43■■□□□ 1.82
NR1H3-228ENST00000525441 EID1Q9Y6B2 187 aa26.42■■□□□ 1.82
NR1H3-228ENST00000525441 SLIT1O75093 1534 aa26.41■■□□□ 1.82
NR1H3-228ENST00000525441 ARHGAP23Q9P227 1491 aa26.41■■□□□ 1.82
NR1H3-228ENST00000525441 KDM5AP29375 1690 aaKnown RBP26.41■■□□□ 1.82
NR1H3-228ENST00000525441 HFM1A2PYH4 1435 aa26.4■■□□□ 1.82
NR1H3-228ENST00000525441 SCAF11Q99590 1463 aaKnown RBP26.4■■□□□ 1.82
NR1H3-228ENST00000525441 TMEM2Q9UHN6 1383 aa26.39■■□□□ 1.82
NR1H3-228ENST00000525441 TXNDC2Q86VQ3 553 aa26.39■■□□□ 1.82
NR1H3-228ENST00000525441 E9PCH4 1651 aa26.38■■□□□ 1.81
NR1H3-228ENST00000525441 ADGRB3O60242 1522 aa26.37■■□□□ 1.81
NR1H3-228ENST00000525441 IQGAP1P46940 1657 aa26.37■■□□□ 1.81
NR1H3-228ENST00000525441 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
NR1H3-228ENST00000525441 LTKP29376 864 aa26.35■■□□□ 1.81
NR1H3-228ENST00000525441 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
NR1H3-228ENST00000525441 CPS1P31327 1500 aa26.29■■□□□ 1.8
NR1H3-228ENST00000525441 HDGFP51858 240 aaKnown RBP26.28■■□□□ 1.8
NR1H3-228ENST00000525441 CHGAP10645 457 aaKnown RBP26.27■■□□□ 1.8
NR1H3-228ENST00000525441 TMEM131LA2VDJ0 1609 aa26.24■■□□□ 1.79
NR1H3-228ENST00000525441 RIMS2Q9UQ26 1411 aa26.22■■□□□ 1.79
NR1H3-228ENST00000525441 PPP1R15AO75807 674 aaPredicted RBP26.21■■□□□ 1.79
NR1H3-228ENST00000525441 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.21■■□□□ 1.79
NR1H3-228ENST00000525441 SPHKAPQ2M3C7 1700 aa26.21■■□□□ 1.79
NR1H3-228ENST00000525441 SLC4A1APQ9BWU0 796 aaKnown RBP26.2■■□□□ 1.78
NR1H3-228ENST00000525441 ZFYVE9O95405 1425 aa26.2■■□□□ 1.78
NR1H3-228ENST00000525441 BCANQ96GW7 911 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms