RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 KIF15Q9NS87 1388 aa19.86■□□□□ 0.77
CTSB-209ENST00000525315 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
CTSB-209ENST00000525315 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
CTSB-209ENST00000525315 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
CTSB-209ENST00000525315 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
CTSB-209ENST00000525315 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
CTSB-209ENST00000525315 RNF17Q9BXT8 1623 aaKnown RBP19.84■□□□□ 0.77
CTSB-209ENST00000525315 ERBINQ96RT1 1412 aa19.82■□□□□ 0.76
CTSB-209ENST00000525315 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
CTSB-209ENST00000525315 WASHC2CQ9Y4E1 1318 aa19.78■□□□□ 0.76
CTSB-209ENST00000525315 MROH1Q8NDA8 1641 aa19.78■□□□□ 0.76
CTSB-209ENST00000525315 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
CTSB-209ENST00000525315 PREX1Q8TCU6 1659 aa19.78■□□□□ 0.76
CTSB-209ENST00000525315 KDM5DQ9BY66 1539 aa19.77■□□□□ 0.76
CTSB-209ENST00000525315 ROCK1Q13464 1354 aa19.77■□□□□ 0.76
CTSB-209ENST00000525315 NPATQ14207 1427 aa19.76■□□□□ 0.75
CTSB-209ENST00000525315 DEPDC5O75140 1603 aa19.75■□□□□ 0.75
CTSB-209ENST00000525315 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
CTSB-209ENST00000525315 ITGAEP38570 1179 aa19.74■□□□□ 0.75
CTSB-209ENST00000525315 ABCC3O15438 1527 aa19.72■□□□□ 0.75
CTSB-209ENST00000525315 ANKRD50Q9ULJ7 1429 aa19.72■□□□□ 0.75
CTSB-209ENST00000525315 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
CTSB-209ENST00000525315 CEP152O94986 1710 aa19.71■□□□□ 0.75
CTSB-209ENST00000525315 UHRF1BP1Q6BDS2 1440 aa19.7■□□□□ 0.74
CTSB-209ENST00000525315 PZPP20742 1482 aa19.7■□□□□ 0.74
CTSB-209ENST00000525315 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
CTSB-209ENST00000525315 FBXO31Q5XUX0 539 aaPredicted RBP19.68■□□□□ 0.74
CTSB-209ENST00000525315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.74
CTSB-209ENST00000525315 VWDEQ8N2E2 1590 aa19.68■□□□□ 0.74
CTSB-209ENST00000525315 HSPA2P54652 639 aa19.67■□□□□ 0.74
CTSB-209ENST00000525315 CAMSAP1Q5T5Y3 1602 aa19.66■□□□□ 0.74
CTSB-209ENST00000525315 KANK1Q14678 1352 aa19.66■□□□□ 0.74
CTSB-209ENST00000525315 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
CTSB-209ENST00000525315 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.73
CTSB-209ENST00000525315 MYO3AQ8NEV4 1616 aa19.62■□□□□ 0.73
CTSB-209ENST00000525315 ZNF142P52746 1687 aaPredicted RBP19.62■□□□□ 0.73
CTSB-209ENST00000525315 UNC13BO14795 1591 aa19.61■□□□□ 0.73
CTSB-209ENST00000525315 TNRQ92752 1358 aa19.61■□□□□ 0.73
CTSB-209ENST00000525315 SPATA31D1Q6ZQQ2 1576 aa19.61■□□□□ 0.73
CTSB-209ENST00000525315 STRCQ7RTU9 1775 aa19.6■□□□□ 0.73
CTSB-209ENST00000525315 NAIPQ13075 1403 aa19.59■□□□□ 0.73
CTSB-209ENST00000525315 CEP170BQ9Y4F5 1589 aaPredicted RBP19.58■□□□□ 0.73
CTSB-209ENST00000525315 ERVK-7P63135 1459 aa19.58■□□□□ 0.72
CTSB-209ENST00000525315 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
CTSB-209ENST00000525315 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
CTSB-209ENST00000525315 TET3O43151 1660 aa19.56■□□□□ 0.72
CTSB-209ENST00000525315 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
CTSB-209ENST00000525315 EFCAB6Q5THR3 1501 aa19.55■□□□□ 0.72
CTSB-209ENST00000525315 IQGAP3Q86VI3 1631 aa19.54■□□□□ 0.72
CTSB-209ENST00000525315 NLRP1Q9C000 1473 aa19.54■□□□□ 0.72
CTSB-209ENST00000525315 NUP155O75694 1391 aa19.53■□□□□ 0.72
CTSB-209ENST00000525315 RPRD2Q5VT52 1461 aaKnown RBP19.51■□□□□ 0.71
CTSB-209ENST00000525315 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
CTSB-209ENST00000525315 NOS1P29475 1434 aa19.5■□□□□ 0.71
CTSB-209ENST00000525315 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
CTSB-209ENST00000525315 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
CTSB-209ENST00000525315 E9PCH4 1651 aa19.49■□□□□ 0.71
CTSB-209ENST00000525315 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
CTSB-209ENST00000525315 PKD2Q13563 968 aa19.47■□□□□ 0.71
CTSB-209ENST00000525315 UBR1Q8IWV7 1749 aa19.46■□□□□ 0.71
CTSB-209ENST00000525315 SYNMO15061 1565 aa19.46■□□□□ 0.71
CTSB-209ENST00000525315 NCKAP5LQ9HCH0 1330 aa19.46■□□□□ 0.71
CTSB-209ENST00000525315 PTPRTO14522 1441 aa19.45■□□□□ 0.7
CTSB-209ENST00000525315 IDI1Q13907 227 aa19.45■□□□□ 0.7
CTSB-209ENST00000525315 SLC52A1Q9NWF4 448 aa19.44■□□□□ 0.7
CTSB-209ENST00000525315 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
CTSB-209ENST00000525315 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
CTSB-209ENST00000525315 POLR1AO95602 1720 aaPredicted RBP19.41■□□□□ 0.7
CTSB-209ENST00000525315 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
CTSB-209ENST00000525315 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
CTSB-209ENST00000525315 SETD5Q9C0A6 1442 aa19.39■□□□□ 0.69
CTSB-209ENST00000525315 ACIN1Q9UKV3 1341 aaKnown RBP19.38■□□□□ 0.69
CTSB-209ENST00000525315 NEURL4Q96JN8 1562 aa19.36■□□□□ 0.69
CTSB-209ENST00000525315 SLIT1O75093 1534 aa19.36■□□□□ 0.69
CTSB-209ENST00000525315 ARHGAP23Q9P227 1491 aa19.36■□□□□ 0.69
CTSB-209ENST00000525315 MYO5BQ9ULV0 1848 aa19.36■□□□□ 0.69
CTSB-209ENST00000525315 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
CTSB-209ENST00000525315 MED14O60244 1454 aa19.35■□□□□ 0.69
CTSB-209ENST00000525315 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
CTSB-209ENST00000525315 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
CTSB-209ENST00000525315 ADGRB3O60242 1522 aa19.33■□□□□ 0.68
CTSB-209ENST00000525315 TMEM131LA2VDJ0 1609 aa19.33■□□□□ 0.68
CTSB-209ENST00000525315 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
CTSB-209ENST00000525315 LTKP29376 864 aa19.32■□□□□ 0.68
CTSB-209ENST00000525315 TXNDC2Q86VQ3 553 aa19.32■□□□□ 0.68
CTSB-209ENST00000525315 HRCP23327 699 aa19.31■□□□□ 0.68
CTSB-209ENST00000525315 NPHP4O75161 1426 aaPredicted RBP19.3■□□□□ 0.68
CTSB-209ENST00000525315 RAB3GAP2Q9H2M9 1393 aa19.3■□□□□ 0.68
CTSB-209ENST00000525315 SCAF11Q99590 1463 aaKnown RBP19.29■□□□□ 0.68
CTSB-209ENST00000525315 MPHOSPH9Q99550 1183 aa19.29■□□□□ 0.68
CTSB-209ENST00000525315 EID1Q9Y6B2 187 aa19.29■□□□□ 0.68
CTSB-209ENST00000525315 IQGAP1P46940 1657 aa19.29■□□□□ 0.68
CTSB-209ENST00000525315 TRPM2O94759 1503 aa19.27■□□□□ 0.68
CTSB-209ENST00000525315 LTBP4Q8N2S1 1624 aa19.27■□□□□ 0.68
CTSB-209ENST00000525315 CHGAP10645 457 aaKnown RBP19.25■□□□□ 0.67
CTSB-209ENST00000525315 CERKQ8TCT0 537 aa19.25■□□□□ 0.67
CTSB-209ENST00000525315 KIF1BO60333 1816 aa19.25■□□□□ 0.67
CTSB-209ENST00000525315 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
CTSB-209ENST00000525315 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
CTSB-209ENST00000525315 HDGFP51858 240 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms