RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 KDM5DQ9BY66 1539 aa17.02■□□□□ 0.32
CTSB-207ENST00000524654 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
CTSB-207ENST00000524654 CROCC2H7BZ55 1655 aa17.01■□□□□ 0.31
CTSB-207ENST00000524654 RRP7BPQ9NSQ0 103 aa17■□□□□ 0.31
CTSB-207ENST00000524654 RNF17Q9BXT8 1623 aaKnown RBP16.99■□□□□ 0.31
CTSB-207ENST00000524654 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
CTSB-207ENST00000524654 SETD1BQ9UPS6 1966 aaKnown RBP16.98■□□□□ 0.31
CTSB-207ENST00000524654 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
CTSB-207ENST00000524654 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
CTSB-207ENST00000524654 PZPP20742 1482 aa16.98■□□□□ 0.31
CTSB-207ENST00000524654 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
CTSB-207ENST00000524654 FBXO31Q5XUX0 539 aaPredicted RBP16.97■□□□□ 0.31
CTSB-207ENST00000524654 CHIC2Q9UKJ5 165 aa16.97■□□□□ 0.31
CTSB-207ENST00000524654 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
CTSB-207ENST00000524654 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.31
CTSB-207ENST00000524654 ABCC3O15438 1527 aa16.96■□□□□ 0.3
CTSB-207ENST00000524654 ADGRL2O95490 1459 aa16.95■□□□□ 0.3
CTSB-207ENST00000524654 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
CTSB-207ENST00000524654 MYO3AQ8NEV4 1616 aa16.94■□□□□ 0.3
CTSB-207ENST00000524654 TNRQ92752 1358 aa16.93■□□□□ 0.3
CTSB-207ENST00000524654 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
CTSB-207ENST00000524654 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
CTSB-207ENST00000524654 STRCQ7RTU9 1775 aa16.92■□□□□ 0.3
CTSB-207ENST00000524654 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
CTSB-207ENST00000524654 A2ML1A8K2U0 1454 aa16.92■□□□□ 0.3
CTSB-207ENST00000524654 ZNF142P52746 1687 aaPredicted RBP16.91■□□□□ 0.3
CTSB-207ENST00000524654 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
CTSB-207ENST00000524654 PTPRTO14522 1441 aa16.91■□□□□ 0.3
CTSB-207ENST00000524654 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
CTSB-207ENST00000524654 CAMSAP1Q5T5Y3 1602 aa16.9■□□□□ 0.3
CTSB-207ENST00000524654 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
CTSB-207ENST00000524654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.295e-11■□□□□ 10.7
CTSB-207ENST00000524654 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
CTSB-207ENST00000524654 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
CTSB-207ENST00000524654 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
CTSB-207ENST00000524654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTSB-207ENST00000524654 SPATA31D1Q6ZQQ2 1576 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 PKD2Q13563 968 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 KANK1Q14678 1352 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 ANKRD50Q9ULJ7 1429 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
CTSB-207ENST00000524654 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
CTSB-207ENST00000524654 LMTK2Q8IWU2 1503 aa16.84■□□□□ 0.29
CTSB-207ENST00000524654 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
CTSB-207ENST00000524654 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
CTSB-207ENST00000524654 CEP152O94986 1710 aa16.82■□□□□ 0.28
CTSB-207ENST00000524654 THEMISQ8N1K5 641 aaPredicted RBP16.82■□□□□ 0.28
CTSB-207ENST00000524654 RRBP1Q9P2E9 1410 aaKnown RBP16.81■□□□□ 0.28
CTSB-207ENST00000524654 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
CTSB-207ENST00000524654 ITGAEP38570 1179 aa16.79■□□□□ 0.28
CTSB-207ENST00000524654 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
CTSB-207ENST00000524654 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
CTSB-207ENST00000524654 LTBP4Q8N2S1 1624 aa16.76■□□□□ 0.27
CTSB-207ENST00000524654 NEURL4Q96JN8 1562 aa16.74■□□□□ 0.27
CTSB-207ENST00000524654 NOS1P29475 1434 aa16.74■□□□□ 0.27
CTSB-207ENST00000524654 UNC13BO14795 1591 aa16.73■□□□□ 0.27
CTSB-207ENST00000524654 MED14O60244 1454 aa16.73■□□□□ 0.27
CTSB-207ENST00000524654 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
CTSB-207ENST00000524654 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
CTSB-207ENST00000524654 IDI1Q13907 227 aa16.71■□□□□ 0.27
CTSB-207ENST00000524654 SYNMO15061 1565 aa16.7■□□□□ 0.26
CTSB-207ENST00000524654 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
CTSB-207ENST00000524654 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
CTSB-207ENST00000524654 NPHP4O75161 1426 aaPredicted RBP16.7■□□□□ 0.26
CTSB-207ENST00000524654 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
CTSB-207ENST00000524654 SLIT1O75093 1534 aa16.69■□□□□ 0.26
CTSB-207ENST00000524654 POLR1AO95602 1720 aaPredicted RBP16.68■□□□□ 0.26
CTSB-207ENST00000524654 NUP155O75694 1391 aa16.68■□□□□ 0.26
CTSB-207ENST00000524654 TET3O43151 1660 aa16.68■□□□□ 0.26
CTSB-207ENST00000524654 LTKP29376 864 aa16.67■□□□□ 0.26
CTSB-207ENST00000524654 NAIPQ13075 1403 aa16.67■□□□□ 0.26
CTSB-207ENST00000524654 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
CTSB-207ENST00000524654 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
CTSB-207ENST00000524654 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
CTSB-207ENST00000524654 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
CTSB-207ENST00000524654 SCAF11Q99590 1463 aaKnown RBP16.66■□□□□ 0.26
CTSB-207ENST00000524654 TXNDC2Q86VQ3 553 aa16.65■□□□□ 0.26
CTSB-207ENST00000524654 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
CTSB-207ENST00000524654 KDM5AP29375 1690 aaKnown RBP16.64■□□□□ 0.25
CTSB-207ENST00000524654 HFM1A2PYH4 1435 aa16.63■□□□□ 0.25
CTSB-207ENST00000524654 EID1Q9Y6B2 187 aa16.63■□□□□ 0.25
CTSB-207ENST00000524654 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
CTSB-207ENST00000524654 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
CTSB-207ENST00000524654 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
CTSB-207ENST00000524654 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
CTSB-207ENST00000524654 CPS1P31327 1500 aa16.6■□□□□ 0.25
CTSB-207ENST00000524654 E9PCH4 1651 aa16.6■□□□□ 0.25
CTSB-207ENST00000524654 ZFYVE9O95405 1425 aa16.56■□□□□ 0.24
CTSB-207ENST00000524654 TMEM131LA2VDJ0 1609 aa16.55■□□□□ 0.24
CTSB-207ENST00000524654 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
CTSB-207ENST00000524654 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
CTSB-207ENST00000524654 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
CTSB-207ENST00000524654 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
CTSB-207ENST00000524654 HDGFP51858 240 aaKnown RBP16.51■□□□□ 0.23
CTSB-207ENST00000524654 SLC26A8Q96RN1 970 aa16.51■□□□□ 0.23
CTSB-207ENST00000524654 PLEKHG1Q9ULL1 1385 aa16.51■□□□□ 0.23
CTSB-207ENST00000524654 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
CTSB-207ENST00000524654 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms