RNA–Protein interactions for RNA: ENST00000524651.5

LMO7-214, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-214ENST00000524651 PTPRKQ15262 1439 aa21.12■□□□□ 0.97
LMO7-214ENST00000524651 NCOA1Q15788 1441 aa21.11■□□□□ 0.97
LMO7-214ENST00000524651 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
LMO7-214ENST00000524651 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
LMO7-214ENST00000524651 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
LMO7-214ENST00000524651 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
LMO7-214ENST00000524651 PREX1Q8TCU6 1659 aa21.09■□□□□ 0.97
LMO7-214ENST00000524651 ADGRL2O95490 1459 aa21.09■□□□□ 0.97
LMO7-214ENST00000524651 NPATQ14207 1427 aa21.09■□□□□ 0.97
LMO7-214ENST00000524651 ERBINQ96RT1 1412 aa21.09■□□□□ 0.97
LMO7-214ENST00000524651 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.97
LMO7-214ENST00000524651 MROH1Q8NDA8 1641 aa21.08■□□□□ 0.97
LMO7-214ENST00000524651 UHRF1BP1Q6BDS2 1440 aa21.08■□□□□ 0.97
LMO7-214ENST00000524651 FAM135AQ9P2D6 1515 aa21.08■□□□□ 0.96
LMO7-214ENST00000524651 ABCC3O15438 1527 aa21.04■□□□□ 0.96
LMO7-214ENST00000524651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.04■□□□□ 0.96
LMO7-214ENST00000524651 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
LMO7-214ENST00000524651 SETD1BQ9UPS6 1966 aaKnown RBP21.02■□□□□ 0.96
LMO7-214ENST00000524651 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.96
LMO7-214ENST00000524651 PZPP20742 1482 aa21.01■□□□□ 0.95
LMO7-214ENST00000524651 PRDM15P57071 1507 aaPredicted RBP21■□□□□ 0.95
LMO7-214ENST00000524651 ITGAEP38570 1179 aa21■□□□□ 0.95
LMO7-214ENST00000524651 DEPDC5O75140 1603 aa20.98■□□□□ 0.95
LMO7-214ENST00000524651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.953e-7■■□□□ 12.6
LMO7-214ENST00000524651 ZC3H13Q5T200 1668 aaKnown RBP20.98■□□□□ 0.95
LMO7-214ENST00000524651 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
LMO7-214ENST00000524651 ANKRD50Q9ULJ7 1429 aa20.97■□□□□ 0.95
LMO7-214ENST00000524651 MYO3AQ8NEV4 1616 aa20.96■□□□□ 0.95
LMO7-214ENST00000524651 TNRQ92752 1358 aa20.96■□□□□ 0.95
LMO7-214ENST00000524651 CEP152O94986 1710 aa20.95■□□□□ 0.94
LMO7-214ENST00000524651 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
LMO7-214ENST00000524651 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
LMO7-214ENST00000524651 CEP170BQ9Y4F5 1589 aaPredicted RBP20.92■□□□□ 0.94
LMO7-214ENST00000524651 ZNF142P52746 1687 aaPredicted RBP20.91■□□□□ 0.94
LMO7-214ENST00000524651 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 SPATA31D1Q6ZQQ2 1576 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 LMTK2Q8IWU2 1503 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 A2ML1A8K2U0 1454 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 ERVK-7P63135 1459 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 KANK1Q14678 1352 aa20.9■□□□□ 0.94
LMO7-214ENST00000524651 NLRP1Q9C000 1473 aa20.85■□□□□ 0.93
LMO7-214ENST00000524651 UNC13BO14795 1591 aa20.85■□□□□ 0.93
LMO7-214ENST00000524651 NCKAP5LQ9HCH0 1330 aa20.83■□□□□ 0.93
LMO7-214ENST00000524651 PLA2R1Q13018 1463 aa20.82■□□□□ 0.92
LMO7-214ENST00000524651 EFCAB6Q5THR3 1501 aa20.82■□□□□ 0.92
LMO7-214ENST00000524651 PTPRTO14522 1441 aa20.8■□□□□ 0.92
LMO7-214ENST00000524651 DMRT2Q9Y5R5 561 aa20.8■□□□□ 0.92
LMO7-214ENST00000524651 NAIPQ13075 1403 aa20.79■□□□□ 0.92
LMO7-214ENST00000524651 UGGT1Q9NYU2 1555 aa20.78■□□□□ 0.92
LMO7-214ENST00000524651 CFAP65Q6ZU64 1925 aaKnown RBP20.77■□□□□ 0.92
LMO7-214ENST00000524651 NOS1P29475 1434 aa20.77■□□□□ 0.91
LMO7-214ENST00000524651 NUP155O75694 1391 aa20.76■□□□□ 0.91
LMO7-214ENST00000524651 PKD2Q13563 968 aa20.76■□□□□ 0.91
LMO7-214ENST00000524651 TET3O43151 1660 aa20.76■□□□□ 0.91
LMO7-214ENST00000524651 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
LMO7-214ENST00000524651 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
LMO7-214ENST00000524651 SYNMO15061 1565 aa20.75■□□□□ 0.91
LMO7-214ENST00000524651 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
LMO7-214ENST00000524651 RPRD2Q5VT52 1461 aaKnown RBP20.74■□□□□ 0.91
LMO7-214ENST00000524651 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
LMO7-214ENST00000524651 IDI1Q13907 227 aa20.72■□□□□ 0.91
LMO7-214ENST00000524651 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
LMO7-214ENST00000524651 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
LMO7-214ENST00000524651 PIK3C2BO00750 1634 aa20.7■□□□□ 0.9
LMO7-214ENST00000524651 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
LMO7-214ENST00000524651 E9PCH4 1651 aa20.69■□□□□ 0.9
LMO7-214ENST00000524651 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
LMO7-214ENST00000524651 POLR1AO95602 1720 aaPredicted RBP20.66■□□□□ 0.9
LMO7-214ENST00000524651 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
LMO7-214ENST00000524651 SLIT1O75093 1534 aa20.64■□□□□ 0.9
LMO7-214ENST00000524651 MED14O60244 1454 aa20.64■□□□□ 0.89
LMO7-214ENST00000524651 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.89
LMO7-214ENST00000524651 CERKQ8TCT0 537 aa20.64■□□□□ 0.89
LMO7-214ENST00000524651 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.89
LMO7-214ENST00000524651 NPHP4O75161 1426 aaPredicted RBP20.63■□□□□ 0.89
LMO7-214ENST00000524651 ZNF335Q9H4Z2 1342 aaPredicted RBP20.63■□□□□ 0.89
LMO7-214ENST00000524651 LTKP29376 864 aa20.63■□□□□ 0.89
LMO7-214ENST00000524651 TMEM2Q9UHN6 1383 aa20.62■□□□□ 0.89
LMO7-214ENST00000524651 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
LMO7-214ENST00000524651 ADGRB3O60242 1522 aa20.62■□□□□ 0.89
LMO7-214ENST00000524651 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
LMO7-214ENST00000524651 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
LMO7-214ENST00000524651 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
LMO7-214ENST00000524651 SCAF11Q99590 1463 aaKnown RBP20.6■□□□□ 0.89
LMO7-214ENST00000524651 FBXO41Q8TF61 875 aa20.57■□□□□ 0.88
LMO7-214ENST00000524651 IQGAP1P46940 1657 aa20.57■□□□□ 0.88
LMO7-214ENST00000524651 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
LMO7-214ENST00000524651 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
LMO7-214ENST00000524651 CHGAP10645 457 aaKnown RBP20.53■□□□□ 0.88
LMO7-214ENST00000524651 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
LMO7-214ENST00000524651 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
LMO7-214ENST00000524651 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
LMO7-214ENST00000524651 SPHKAPQ2M3C7 1700 aa20.52■□□□□ 0.88
LMO7-214ENST00000524651 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
LMO7-214ENST00000524651 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
LMO7-214ENST00000524651 TRPM2O94759 1503 aa20.49■□□□□ 0.87
LMO7-214ENST00000524651 FOXD1Q16676 465 aa20.48■□□□□ 0.87
LMO7-214ENST00000524651 RAB3GAP2Q9H2M9 1393 aa20.47■□□□□ 0.87
LMO7-214ENST00000524651 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms