RNA–Protein interactions for RNA: ENST00000524633.1

SORL1-202, Transcript of sortilin related receptor 1, humanhuman

TSL 5

Gene SORL1, Length 1,338 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-202ENST00000524633 CPS1P31327 1500 aa13.28□□□□□ -0.28
SORL1-202ENST00000524633 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
SORL1-202ENST00000524633 KIDINS220Q9ULH0 1771 aa13.28□□□□□ -0.28
SORL1-202ENST00000524633 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
SORL1-202ENST00000524633 CEP170BQ9Y4F5 1589 aaPredicted RBP13.27□□□□□ -0.28
SORL1-202ENST00000524633 A2ML1A8K2U0 1454 aa13.27□□□□□ -0.29
SORL1-202ENST00000524633 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
SORL1-202ENST00000524633 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
SORL1-202ENST00000524633 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
SORL1-202ENST00000524633 MROH2AA6NES4 1674 aa13.25□□□□□ -0.29
SORL1-202ENST00000524633 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
SORL1-202ENST00000524633 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
SORL1-202ENST00000524633 A2MP01023 1474 aa13.23□□□□□ -0.29
SORL1-202ENST00000524633 POTEAQ6S8J7 498 aa13.23□□□□□ -0.29
SORL1-202ENST00000524633 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
SORL1-202ENST00000524633 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
SORL1-202ENST00000524633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
SORL1-202ENST00000524633 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
SORL1-202ENST00000524633 ZNF142P52746 1687 aaPredicted RBP13.21□□□□□ -0.29
SORL1-202ENST00000524633 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
SORL1-202ENST00000524633 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.3
SORL1-202ENST00000524633 TNRQ92752 1358 aa13.21□□□□□ -0.3
SORL1-202ENST00000524633 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
SORL1-202ENST00000524633 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
SORL1-202ENST00000524633 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
SORL1-202ENST00000524633 ITSN2Q9NZM3 1697 aa13.19□□□□□ -0.3
SORL1-202ENST00000524633 PLXNC1O60486 1568 aa13.19□□□□□ -0.3
SORL1-202ENST00000524633 CFDP1Q9UEE9 299 aaPredicted RBP13.18□□□□□ -0.3
SORL1-202ENST00000524633 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
SORL1-202ENST00000524633 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
SORL1-202ENST00000524633 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
SORL1-202ENST00000524633 MED14O60244 1454 aa13.18□□□□□ -0.3
SORL1-202ENST00000524633 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
SORL1-202ENST00000524633 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
SORL1-202ENST00000524633 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
SORL1-202ENST00000524633 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
SORL1-202ENST00000524633 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
SORL1-202ENST00000524633 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
SORL1-202ENST00000524633 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
SORL1-202ENST00000524633 KIF3BO15066 747 aa13.14□□□□□ -0.31
SORL1-202ENST00000524633 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
SORL1-202ENST00000524633 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
SORL1-202ENST00000524633 WASHC2CQ9Y4E1 1318 aa13.13□□□□□ -0.31
SORL1-202ENST00000524633 PLEKHH2Q8IVE3 1493 aa13.13□□□□□ -0.31
SORL1-202ENST00000524633 PZPP20742 1482 aa13.12□□□□□ -0.31
SORL1-202ENST00000524633 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
SORL1-202ENST00000524633 INO80Q9ULG1 1556 aaPredicted RBP13.1□□□□□ -0.31
SORL1-202ENST00000524633 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
SORL1-202ENST00000524633 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
SORL1-202ENST00000524633 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
SORL1-202ENST00000524633 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
SORL1-202ENST00000524633 MBD5Q9P267 1494 aa13.09□□□□□ -0.31
SORL1-202ENST00000524633 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
SORL1-202ENST00000524633 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
SORL1-202ENST00000524633 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
SORL1-202ENST00000524633 UGGT1Q9NYU2 1555 aa13.07□□□□□ -0.32
SORL1-202ENST00000524633 LTKP29376 864 aa13.07□□□□□ -0.32
SORL1-202ENST00000524633 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
SORL1-202ENST00000524633 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
SORL1-202ENST00000524633 DEPDC5O75140 1603 aa13.05□□□□□ -0.32
SORL1-202ENST00000524633 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
SORL1-202ENST00000524633 STRCP1A6NGW2 1772 aa13.03□□□□□ -0.32
SORL1-202ENST00000524633 TXNDC2Q86VQ3 553 aa13.03□□□□□ -0.32
SORL1-202ENST00000524633 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
SORL1-202ENST00000524633 KDM5DQ9BY66 1539 aa13.02□□□□□ -0.33
SORL1-202ENST00000524633 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.33
SORL1-202ENST00000524633 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
SORL1-202ENST00000524633 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
SORL1-202ENST00000524633 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
SORL1-202ENST00000524633 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
SORL1-202ENST00000524633 ADGBQ8N7X0 1667 aa12.99□□□□□ -0.33
SORL1-202ENST00000524633 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
SORL1-202ENST00000524633 SCAF11Q99590 1463 aaKnown RBP12.98□□□□□ -0.33
SORL1-202ENST00000524633 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
SORL1-202ENST00000524633 KCNA6P17658 529 aa12.97□□□□□ -0.33
SORL1-202ENST00000524633 SYNMO15061 1565 aa12.97□□□□□ -0.33
SORL1-202ENST00000524633 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
SORL1-202ENST00000524633 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
SORL1-202ENST00000524633 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
SORL1-202ENST00000524633 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
SORL1-202ENST00000524633 ERVK-7P63135 1459 aa12.95□□□□□ -0.34
SORL1-202ENST00000524633 ARHGAP23Q9P227 1491 aa12.95□□□□□ -0.34
SORL1-202ENST00000524633 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
SORL1-202ENST00000524633 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
SORL1-202ENST00000524633 POLA2Q14181 598 aa12.94□□□□□ -0.34
SORL1-202ENST00000524633 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
SORL1-202ENST00000524633 JCADQ9P266 1359 aa12.94□□□□□ -0.34
SORL1-202ENST00000524633 CCDC141Q6ZP82 1450 aa12.93□□□□□ -0.34
SORL1-202ENST00000524633 ZC3H13Q5T200 1668 aaKnown RBP12.92□□□□□ -0.34
SORL1-202ENST00000524633 ZNF772Q68DY9 489 aaPredicted RBP12.91□□□□□ -0.34
SORL1-202ENST00000524633 SLC26A8Q96RN1 970 aa12.91□□□□□ -0.34
SORL1-202ENST00000524633 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
SORL1-202ENST00000524633 ABCC3O15438 1527 aa12.91□□□□□ -0.34
SORL1-202ENST00000524633 SLIT1O75093 1534 aa12.91□□□□□ -0.34
SORL1-202ENST00000524633 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
SORL1-202ENST00000524633 TMEM2Q9UHN6 1383 aa12.9□□□□□ -0.34
SORL1-202ENST00000524633 TIAM1Q13009 1591 aa12.9□□□□□ -0.34
SORL1-202ENST00000524633 RXRBP28702 533 aa12.88□□□□□ -0.35
SORL1-202ENST00000524633 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
SORL1-202ENST00000524633 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms