RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 SUPT6HQ7KZ85 1726 aaKnown RBP9.64□□□□□ -0.87
FAM49B-228ENST00000523993 MBD5Q9P267 1494 aa9.63□□□□□ -0.87
FAM49B-228ENST00000523993 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
FAM49B-228ENST00000523993 ILDR1Q86SU0 546 aaPredicted RBP9.62□□□□□ -0.87
FAM49B-228ENST00000523993 CNTLNQ9NXG0 1405 aa9.62□□□□□ -0.87
FAM49B-228ENST00000523993 STRCQ7RTU9 1775 aa9.62□□□□□ -0.87
FAM49B-228ENST00000523993 MAP3K1Q13233 1512 aa9.61□□□□□ -0.87
FAM49B-228ENST00000523993 MLECQ14165 292 aa9.61□□□□□ -0.87
FAM49B-228ENST00000523993 CFDP1Q9UEE9 299 aaPredicted RBP9.61□□□□□ -0.87
FAM49B-228ENST00000523993 RTEL1-TNFRSF6BF6WH68 1400 aa9.61□□□□□ -0.87
FAM49B-228ENST00000523993 VPS8Q8N3P4 1428 aa9.6□□□□□ -0.87
FAM49B-228ENST00000523993 BCANQ96GW7 911 aa9.6□□□□□ -0.87
FAM49B-228ENST00000523993 NCOA2Q15596 1464 aa9.59□□□□□ -0.87
FAM49B-228ENST00000523993 SPAG9O60271 1321 aaKnown RBP9.59□□□□□ -0.87
FAM49B-228ENST00000523993 HNRNPMP52272 730 aaKnown RBP eCLIP9.59□□□□□ -0.87
FAM49B-228ENST00000523993 PROM2Q8N271 834 aa9.59□□□□□ -0.87
FAM49B-228ENST00000523993 A2MP01023 1474 aa9.59□□□□□ -0.87
FAM49B-228ENST00000523993 ARHGEF5Q12774 1597 aa9.58□□□□□ -0.88
FAM49B-228ENST00000523993 NPATQ14207 1427 aa9.58□□□□□ -0.88
FAM49B-228ENST00000523993 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
FAM49B-228ENST00000523993 CLTCQ00610 1675 aaKnown RBP9.58□□□□□ -0.88
FAM49B-228ENST00000523993 UHRF1BP1Q6BDS2 1440 aa9.57□□□□□ -0.88
FAM49B-228ENST00000523993 FAM135AQ9P2D6 1515 aa9.57□□□□□ -0.88
FAM49B-228ENST00000523993 CEBPAP49715 358 aaPredicted RBP9.57□□□□□ -0.88
FAM49B-228ENST00000523993 RSPH4AQ5TD94 716 aa9.57□□□□□ -0.88
FAM49B-228ENST00000523993 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
FAM49B-228ENST00000523993 ZNF777Q9ULD5 760 aaPredicted RBP9.57□□□□□ -0.88
FAM49B-228ENST00000523993 LRRC9Q6ZRR7 1453 aa9.57□□□□□ -0.88
FAM49B-228ENST00000523993 ZNF142P52746 1687 aaPredicted RBP9.57□□□□□ -0.88
FAM49B-228ENST00000523993 CAMSAP2Q08AD1 1489 aa9.56□□□□□ -0.88
FAM49B-228ENST00000523993 CCDC141Q6ZP82 1450 aa9.56□□□□□ -0.88
FAM49B-228ENST00000523993 HSPA2P54652 639 aa9.56□□□□□ -0.88
FAM49B-228ENST00000523993 MKRN4PQ13434 485 aaPredicted RBP9.56□□□□□ -0.88
FAM49B-228ENST00000523993 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
FAM49B-228ENST00000523993 ZNF644Q9H582 1327 aaPredicted RBP9.56□□□□□ -0.88
FAM49B-228ENST00000523993 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
FAM49B-228ENST00000523993 MAST1Q9Y2H9 1570 aa9.54□□□□□ -0.88
FAM49B-228ENST00000523993 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
FAM49B-228ENST00000523993 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
FAM49B-228ENST00000523993 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
FAM49B-228ENST00000523993 ESF1Q9H501 851 aaKnown RBP9.53□□□□□ -0.88
FAM49B-228ENST00000523993 PTPRTO14522 1441 aa9.53□□□□□ -0.88
FAM49B-228ENST00000523993 MYO3AQ8NEV4 1616 aa9.53□□□□□ -0.88
FAM49B-228ENST00000523993 PKD2Q13563 968 aa9.52□□□□□ -0.89
FAM49B-228ENST00000523993 MIA2Q96PC5 1412 aa9.52□□□□□ -0.89
FAM49B-228ENST00000523993 PTPRKQ15262 1439 aa9.51□□□□□ -0.89
FAM49B-228ENST00000523993 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
FAM49B-228ENST00000523993 POLA2Q14181 598 aa9.51□□□□□ -0.89
FAM49B-228ENST00000523993 SP7Q8TDD2 431 aaPredicted RBP9.51□□□□□ -0.89
FAM49B-228ENST00000523993 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
FAM49B-228ENST00000523993 RNF17Q9BXT8 1623 aaKnown RBP9.51□□□□□ -0.89
FAM49B-228ENST00000523993 EIF2AK4Q9P2K8 1649 aaKnown RBP9.51□□□□□ -0.89
FAM49B-228ENST00000523993 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
FAM49B-228ENST00000523993 PLA2R1Q13018 1463 aa9.5□□□□□ -0.89
FAM49B-228ENST00000523993 CROCC2H7BZ55 1655 aa9.5□□□□□ -0.89
FAM49B-228ENST00000523993 ZC3H13Q5T200 1668 aaKnown RBP9.5□□□□□ -0.89
FAM49B-228ENST00000523993 CEP170BQ9Y4F5 1589 aaPredicted RBP9.5□□□□□ -0.89
FAM49B-228ENST00000523993 MYOM3Q5VTT5 1437 aa9.49□□□□□ -0.89
FAM49B-228ENST00000523993 KDM5DQ9BY66 1539 aa9.49□□□□□ -0.89
FAM49B-228ENST00000523993 CAMSAP1Q5T5Y3 1602 aa9.49□□□□□ -0.89
FAM49B-228ENST00000523993 KANK4Q5T7N3 995 aaPredicted RBP9.48□□□□□ -0.89
FAM49B-228ENST00000523993 LTBP4Q8N2S1 1624 aa9.48□□□□□ -0.89
FAM49B-228ENST00000523993 PZPP20742 1482 aa9.47□□□□□ -0.89
FAM49B-228ENST00000523993 TCOF1Q13428 1488 aaKnown RBP9.47□□□□□ -0.89
FAM49B-228ENST00000523993 DNMT1P26358 1616 aaKnown RBP9.47□□□□□ -0.89
FAM49B-228ENST00000523993 GGT6Q6P531 493 aa9.47□□□□□ -0.89
FAM49B-228ENST00000523993 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
FAM49B-228ENST00000523993 POLR1AO95602 1720 aaPredicted RBP9.47□□□□□ -0.89
FAM49B-228ENST00000523993 IQSEC2Q5JU85 1478 aa9.47□□□□□ -0.89
FAM49B-228ENST00000523993 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
FAM49B-228ENST00000523993 MROH1Q8NDA8 1641 aa9.46□□□□□ -0.89
FAM49B-228ENST00000523993 TSPY4P0CV99 314 aa9.46□□□□□ -0.9
FAM49B-228ENST00000523993 TSPY10P0CW01 314 aa9.46□□□□□ -0.9
FAM49B-228ENST00000523993 A2ML1A8K2U0 1454 aa9.46□□□□□ -0.9
FAM49B-228ENST00000523993 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
FAM49B-228ENST00000523993 KIF3BO15066 747 aa9.44□□□□□ -0.9
FAM49B-228ENST00000523993 AKT1S1Q96B36 256 aa9.44□□□□□ -0.9
FAM49B-228ENST00000523993 DUOX2Q9NRD8 1548 aa9.44□□□□□ -0.9
FAM49B-228ENST00000523993 DEPDC5O75140 1603 aa9.44□□□□□ -0.9
FAM49B-228ENST00000523993 SPATA31D1Q6ZQQ2 1576 aa9.43□□□□□ -0.9
FAM49B-228ENST00000523993 ABCC3O15438 1527 aa9.43□□□□□ -0.9
FAM49B-228ENST00000523993 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
FAM49B-228ENST00000523993 CEP152O94986 1710 aa9.42□□□□□ -0.9
FAM49B-228ENST00000523993 PRDM15P57071 1507 aaPredicted RBP9.42□□□□□ -0.9
FAM49B-228ENST00000523993 NLRP1Q9C000 1473 aa9.42□□□□□ -0.9
FAM49B-228ENST00000523993 NEURL4Q96JN8 1562 aa9.41□□□□□ -0.9
FAM49B-228ENST00000523993 ABCC5O15440 1437 aa9.41□□□□□ -0.9
FAM49B-228ENST00000523993 FGD6Q6ZV73 1430 aa9.41□□□□□ -0.9
FAM49B-228ENST00000523993 ERBINQ96RT1 1412 aa9.41□□□□□ -0.9
FAM49B-228ENST00000523993 WASHC2CQ9Y4E1 1318 aa9.41□□□□□ -0.9
FAM49B-228ENST00000523993 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
FAM49B-228ENST00000523993 TNRQ92752 1358 aa9.4□□□□□ -0.9
FAM49B-228ENST00000523993 MED14O60244 1454 aa9.4□□□□□ -0.91
FAM49B-228ENST00000523993 DAPK1P53355 1430 aa9.39□□□□□ -0.91
FAM49B-228ENST00000523993 ARHGAP31Q2M1Z3 1444 aa9.39□□□□□ -0.91
FAM49B-228ENST00000523993 KDM5AP29375 1690 aaKnown RBP9.39□□□□□ -0.91
FAM49B-228ENST00000523993 VWDEQ8N2E2 1590 aa9.39□□□□□ -0.91
FAM49B-228ENST00000523993 TPRNQ4KMQ1 711 aa9.39□□□□□ -0.91
FAM49B-228ENST00000523993 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
FAM49B-228ENST00000523993 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms