RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
HMBOX1-210ENST00000523613 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
HMBOX1-210ENST00000523613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.01■■□□□ 1.112e-10■□□□□ 10.7
HMBOX1-210ENST00000523613 YEATS2Q9ULM3 1422 aa22.01■■□□□ 1.11
HMBOX1-210ENST00000523613 KIF3BO15066 747 aa22■■□□□ 1.11
HMBOX1-210ENST00000523613 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
HMBOX1-210ENST00000523613 DEPDC5O75140 1603 aa21.98■■□□□ 1.11
HMBOX1-210ENST00000523613 IQGAP3Q86VI3 1631 aa21.97■■□□□ 1.11
HMBOX1-210ENST00000523613 ATP10AO60312 1499 aa21.95■■□□□ 1.1
HMBOX1-210ENST00000523613 KANK1Q14678 1352 aa21.95■■□□□ 1.1
HMBOX1-210ENST00000523613 PKD2Q13563 968 aa21.95■■□□□ 1.1
HMBOX1-210ENST00000523613 FOXD1Q16676 465 aa21.94■■□□□ 1.1
HMBOX1-210ENST00000523613 BCORL1Q5H9F3 1711 aa21.93■■□□□ 1.1
HMBOX1-210ENST00000523613 RNF17Q9BXT8 1623 aaKnown RBP21.93■■□□□ 1.1
HMBOX1-210ENST00000523613 PRDM15P57071 1507 aaPredicted RBP21.93■■□□□ 1.1
HMBOX1-210ENST00000523613 ARHGEF40Q8TER5 1519 aa21.92■■□□□ 1.1
HMBOX1-210ENST00000523613 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
HMBOX1-210ENST00000523613 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
HMBOX1-210ENST00000523613 REREQ9P2R6 1566 aa21.91■■□□□ 1.1
HMBOX1-210ENST00000523613 MROH1Q8NDA8 1641 aa21.9■■□□□ 1.1
HMBOX1-210ENST00000523613 ANKRD30BQ9BXX2 1392 aa21.9■■□□□ 1.1
HMBOX1-210ENST00000523613 VWDEQ8N2E2 1590 aa21.89■■□□□ 1.09
HMBOX1-210ENST00000523613 GGT6Q6P531 493 aa21.86■■□□□ 1.09
HMBOX1-210ENST00000523613 AGLP35573 1532 aa21.84■■□□□ 1.09
HMBOX1-210ENST00000523613 TET3O43151 1660 aa21.84■■□□□ 1.09
HMBOX1-210ENST00000523613 TIMELESSQ9UNS1 1208 aa21.83■■□□□ 1.09
HMBOX1-210ENST00000523613 LMTK2Q8IWU2 1503 aa21.81■■□□□ 1.08
HMBOX1-210ENST00000523613 TONSLQ96HA7 1378 aa21.81■■□□□ 1.08
HMBOX1-210ENST00000523613 CEP152O94986 1710 aa21.79■■□□□ 1.08
HMBOX1-210ENST00000523613 WASHC2CQ9Y4E1 1318 aa21.79■■□□□ 1.08
HMBOX1-210ENST00000523613 RPRD2Q5VT52 1461 aaKnown RBP21.79■■□□□ 1.08
HMBOX1-210ENST00000523613 E9PCH4 1651 aa21.78■■□□□ 1.08
HMBOX1-210ENST00000523613 ABCC3O15438 1527 aa21.78■■□□□ 1.08
HMBOX1-210ENST00000523613 EFCAB6Q5THR3 1501 aa21.77■■□□□ 1.08
HMBOX1-210ENST00000523613 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
HMBOX1-210ENST00000523613 SIGLEC1Q9BZZ2 1709 aa21.75■■□□□ 1.07
HMBOX1-210ENST00000523613 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
HMBOX1-210ENST00000523613 CCDC144AA2RUR9 1427 aa21.73■■□□□ 1.07
HMBOX1-210ENST00000523613 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
HMBOX1-210ENST00000523613 ARID4BQ4LE39 1312 aaPredicted RBP21.72■■□□□ 1.07
HMBOX1-210ENST00000523613 CAMSAP1Q5T5Y3 1602 aa21.72■■□□□ 1.07
HMBOX1-210ENST00000523613 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
HMBOX1-210ENST00000523613 PTPRTO14522 1441 aa21.7■■□□□ 1.06
HMBOX1-210ENST00000523613 MLECQ14165 292 aa21.69■■□□□ 1.06
HMBOX1-210ENST00000523613 TRPM2O94759 1503 aa21.69■■□□□ 1.06
HMBOX1-210ENST00000523613 NPATQ14207 1427 aa21.68■■□□□ 1.06
HMBOX1-210ENST00000523613 ARHGAP31Q2M1Z3 1444 aa21.67■■□□□ 1.06
HMBOX1-210ENST00000523613 PPP1R15AO75807 674 aaPredicted RBP21.66■■□□□ 1.06
HMBOX1-210ENST00000523613 L3MBTL2Q969R5 705 aa21.65■■□□□ 1.06
HMBOX1-210ENST00000523613 ESF1Q9H501 851 aaKnown RBP21.64■■□□□ 1.06
HMBOX1-210ENST00000523613 CLTCQ00610 1675 aaKnown RBP21.63■■□□□ 1.05
HMBOX1-210ENST00000523613 CNTLNQ9NXG0 1405 aa21.61■■□□□ 1.05
HMBOX1-210ENST00000523613 CLTCL1P53675 1640 aa21.6■■□□□ 1.05
HMBOX1-210ENST00000523613 NOS1P29475 1434 aa21.58■■□□□ 1.05
HMBOX1-210ENST00000523613 CFAP65Q6ZU64 1925 aaKnown RBP21.56■■□□□ 1.04
HMBOX1-210ENST00000523613 PREX1Q8TCU6 1659 aa21.55■■□□□ 1.04
HMBOX1-210ENST00000523613 UGGT1Q9NYU2 1555 aa21.55■■□□□ 1.04
HMBOX1-210ENST00000523613 RGL3Q3MIN7 710 aa21.54■■□□□ 1.04
HMBOX1-210ENST00000523613 SPATA31E1Q6ZUB1 1445 aa21.53■■□□□ 1.04
HMBOX1-210ENST00000523613 SYNMO15061 1565 aa21.52■■□□□ 1.04
HMBOX1-210ENST00000523613 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
HMBOX1-210ENST00000523613 ERVK-7P63135 1459 aa21.52■■□□□ 1.04
HMBOX1-210ENST00000523613 KIF1BO60333 1816 aa21.51■■□□□ 1.03
HMBOX1-210ENST00000523613 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
HMBOX1-210ENST00000523613 DCAF11Q8TEB1 546 aa21.51■■□□□ 1.03
HMBOX1-210ENST00000523613 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
HMBOX1-210ENST00000523613 FBXO31Q5XUX0 539 aaPredicted RBP21.5■■□□□ 1.03
HMBOX1-210ENST00000523613 PIK3C2BO00750 1634 aa21.49■■□□□ 1.03
HMBOX1-210ENST00000523613 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
HMBOX1-210ENST00000523613 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
HMBOX1-210ENST00000523613 FER1L4A9Z1Z3 1794 aa21.48■■□□□ 1.03
HMBOX1-210ENST00000523613 SPATA31D1Q6ZQQ2 1576 aa21.48■■□□□ 1.03
HMBOX1-210ENST00000523613 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
HMBOX1-210ENST00000523613 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
HMBOX1-210ENST00000523613 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
HMBOX1-210ENST00000523613 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
HMBOX1-210ENST00000523613 ADGRB3O60242 1522 aa21.46■■□□□ 1.03
HMBOX1-210ENST00000523613 IDI1Q13907 227 aa21.43■■□□□ 1.02
HMBOX1-210ENST00000523613 STAC3Q96MF2 364 aa21.43■■□□□ 1.02
HMBOX1-210ENST00000523613 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
HMBOX1-210ENST00000523613 PRAG1Q86YV5 1406 aa21.4■■□□□ 1.02
HMBOX1-210ENST00000523613 TNRQ92752 1358 aa21.39■■□□□ 1.01
HMBOX1-210ENST00000523613 MADDQ8WXG6 1647 aa21.39■■□□□ 1.01
HMBOX1-210ENST00000523613 C3P01024 1663 aa21.39■■□□□ 1.01
HMBOX1-210ENST00000523613 RPGRIP1LQ68CZ1 1315 aa21.38■■□□□ 1.01
HMBOX1-210ENST00000523613 ADAMTSL3P82987 1691 aa21.37■■□□□ 1.01
HMBOX1-210ENST00000523613 RALGAPBQ86X10 1494 aa21.37■■□□□ 1.01
HMBOX1-210ENST00000523613 CEBPAP49715 358 aaPredicted RBP21.36■■□□□ 1.01
HMBOX1-210ENST00000523613 STAG3Q9UJ98 1225 aa21.36■■□□□ 1.01
HMBOX1-210ENST00000523613 TMEM131LA2VDJ0 1609 aa21.36■■□□□ 1.01
HMBOX1-210ENST00000523613 MYOM2P54296 1465 aa21.36■■□□□ 1.01
HMBOX1-210ENST00000523613 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
HMBOX1-210ENST00000523613 IFT172Q9UG01 1749 aa21.35■■□□□ 1.01
HMBOX1-210ENST00000523613 PPLO60437 1756 aa21.33■■□□□ 1
HMBOX1-210ENST00000523613 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
HMBOX1-210ENST00000523613 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
HMBOX1-210ENST00000523613 MYO5BQ9ULV0 1848 aa21.31■■□□□ 1
HMBOX1-210ENST00000523613 EIF4G2P78344 907 aaKnown RBP eCLIP21.3■■□□□ 11e-6■■■□□ 15.8
HMBOX1-210ENST00000523613 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
HMBOX1-210ENST00000523613 NLRP1Q9C000 1473 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms