RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
PABPC1-222ENST00000523555 STRCQ7RTU9 1775 aa14.78□□□□□ -0.04
PABPC1-222ENST00000523555 KDM5DQ9BY66 1539 aa14.78□□□□□ -0.04
PABPC1-222ENST00000523555 CHIC2Q9UKJ5 165 aa14.78□□□□□ -0.04
PABPC1-222ENST00000523555 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.04
PABPC1-222ENST00000523555 KIF15Q9NS87 1388 aa14.77□□□□□ -0.04
PABPC1-222ENST00000523555 FAM50AQ14320 339 aaKnown RBP14.77□□□□□ -0.05
PABPC1-222ENST00000523555 RRP7BPQ9NSQ0 103 aa14.77□□□□□ -0.05
PABPC1-222ENST00000523555 PTPRKQ15262 1439 aa14.76□□□□□ -0.05
PABPC1-222ENST00000523555 UHRF1BP1Q6BDS2 1440 aa14.76□□□□□ -0.05
PABPC1-222ENST00000523555 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
PABPC1-222ENST00000523555 ZC3H13Q5T200 1668 aaKnown RBP14.75□□□□□ -0.05
PABPC1-222ENST00000523555 ABCC3O15438 1527 aa14.75□□□□□ -0.05
PABPC1-222ENST00000523555 NPATQ14207 1427 aa14.75□□□□□ -0.05
PABPC1-222ENST00000523555 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
PABPC1-222ENST00000523555 DEPDC5O75140 1603 aa14.74□□□□□ -0.05
PABPC1-222ENST00000523555 ADGRL2O95490 1459 aa14.74□□□□□ -0.05
PABPC1-222ENST00000523555 NCOA1Q15788 1441 aa14.74□□□□□ -0.05
PABPC1-222ENST00000523555 FAM135AQ9P2D6 1515 aa14.73□□□□□ -0.05
PABPC1-222ENST00000523555 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
PABPC1-222ENST00000523555 ERBINQ96RT1 1412 aa14.73□□□□□ -0.05
PABPC1-222ENST00000523555 CAMSAP1Q5T5Y3 1602 aa14.73□□□□□ -0.05
PABPC1-222ENST00000523555 PRDM15P57071 1507 aaPredicted RBP14.72□□□□□ -0.05
PABPC1-222ENST00000523555 WASHC2CQ9Y4E1 1318 aa14.71□□□□□ -0.05
PABPC1-222ENST00000523555 PZPP20742 1482 aa14.71□□□□□ -0.05
PABPC1-222ENST00000523555 FBXO31Q5XUX0 539 aaPredicted RBP14.71□□□□□ -0.05
PABPC1-222ENST00000523555 CEP170BQ9Y4F5 1589 aaPredicted RBP14.71□□□□□ -0.05
PABPC1-222ENST00000523555 ANKRD30AQ9BXX3 1397 aa14.71□□□□□ -0.06
PABPC1-222ENST00000523555 VWDEQ8N2E2 1590 aa14.67□□□□□ -0.06
PABPC1-222ENST00000523555 SPATA31D1Q6ZQQ2 1576 aa14.66□□□□□ -0.06
PABPC1-222ENST00000523555 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
PABPC1-222ENST00000523555 TNRQ92752 1358 aa14.65□□□□□ -0.06
PABPC1-222ENST00000523555 ITGAEP38570 1179 aa14.65□□□□□ -0.06
PABPC1-222ENST00000523555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
PABPC1-222ENST00000523555 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
PABPC1-222ENST00000523555 ANKRD50Q9ULJ7 1429 aa14.64□□□□□ -0.07
PABPC1-222ENST00000523555 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
PABPC1-222ENST00000523555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.63□□□□□ -0.079e-8■□□□□ 8.7
PABPC1-222ENST00000523555 UNC13BO14795 1591 aa14.62□□□□□ -0.07
PABPC1-222ENST00000523555 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
PABPC1-222ENST00000523555 POLR1AO95602 1720 aaPredicted RBP14.61□□□□□ -0.07
PABPC1-222ENST00000523555 ROCK1Q13464 1354 aa14.6□□□□□ -0.07
PABPC1-222ENST00000523555 UBR1Q8IWV7 1749 aa14.6□□□□□ -0.07
PABPC1-222ENST00000523555 EFCAB6Q5THR3 1501 aa14.6□□□□□ -0.07
PABPC1-222ENST00000523555 NCKAP5LQ9HCH0 1330 aa14.6□□□□□ -0.07
PABPC1-222ENST00000523555 ARHGAP31Q2M1Z3 1444 aa14.59□□□□□ -0.07
PABPC1-222ENST00000523555 PLA2R1Q13018 1463 aa14.59□□□□□ -0.07
PABPC1-222ENST00000523555 SYNMO15061 1565 aa14.58□□□□□ -0.08
PABPC1-222ENST00000523555 NEURL4Q96JN8 1562 aa14.58□□□□□ -0.08
PABPC1-222ENST00000523555 UGGT1Q9NYU2 1555 aa14.58□□□□□ -0.08
PABPC1-222ENST00000523555 TET3O43151 1660 aa14.58□□□□□ -0.08
PABPC1-222ENST00000523555 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
PABPC1-222ENST00000523555 NLRP1Q9C000 1473 aa14.57□□□□□ -0.08
PABPC1-222ENST00000523555 PIK3C2BO00750 1634 aa14.57□□□□□ -0.08
PABPC1-222ENST00000523555 KANK1Q14678 1352 aa14.57□□□□□ -0.08
PABPC1-222ENST00000523555 PTPRTO14522 1441 aa14.57□□□□□ -0.08
PABPC1-222ENST00000523555 E9PCH4 1651 aa14.56□□□□□ -0.08
PABPC1-222ENST00000523555 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
PABPC1-222ENST00000523555 ILDR1Q86SU0 546 aaPredicted RBP14.54□□□□□ -0.08
PABPC1-222ENST00000523555 MYO5BQ9ULV0 1848 aa14.54□□□□□ -0.08
PABPC1-222ENST00000523555 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.08
PABPC1-222ENST00000523555 NOS1P29475 1434 aa14.52□□□□□ -0.08
PABPC1-222ENST00000523555 NAIPQ13075 1403 aa14.51□□□□□ -0.09
PABPC1-222ENST00000523555 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
PABPC1-222ENST00000523555 PKD2Q13563 968 aa14.49□□□□□ -0.09
PABPC1-222ENST00000523555 IQGAP1P46940 1657 aa14.49□□□□□ -0.09
PABPC1-222ENST00000523555 RPRD2Q5VT52 1461 aaKnown RBP14.48□□□□□ -0.09
PABPC1-222ENST00000523555 KDM5AP29375 1690 aaKnown RBP14.48□□□□□ -0.09
PABPC1-222ENST00000523555 NUP155O75694 1391 aa14.47□□□□□ -0.09
PABPC1-222ENST00000523555 ZNF335Q9H4Z2 1342 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-222ENST00000523555 ARHGAP23Q9P227 1491 aa14.47□□□□□ -0.09
PABPC1-222ENST00000523555 IDI1Q13907 227 aa14.47□□□□□ -0.09
PABPC1-222ENST00000523555 THEMISQ8N1K5 641 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-222ENST00000523555 CERKQ8TCT0 537 aa14.47□□□□□ -0.09
PABPC1-222ENST00000523555 ADGRB3O60242 1522 aa14.46□□□□□ -0.09
PABPC1-222ENST00000523555 SLIT1O75093 1534 aa14.46□□□□□ -0.09
PABPC1-222ENST00000523555 MED14O60244 1454 aa14.46□□□□□ -0.09
PABPC1-222ENST00000523555 STRCP1A6NGW2 1772 aa14.46□□□□□ -0.09
PABPC1-222ENST00000523555 HFM1A2PYH4 1435 aa14.46□□□□□ -0.09
PABPC1-222ENST00000523555 SPHKAPQ2M3C7 1700 aa14.46□□□□□ -0.1
PABPC1-222ENST00000523555 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
PABPC1-222ENST00000523555 LTKP29376 864 aa14.44□□□□□ -0.1
PABPC1-222ENST00000523555 ANKLE2Q86XL3 938 aa14.44□□□□□ -0.1
PABPC1-222ENST00000523555 TMEM131LA2VDJ0 1609 aa14.44□□□□□ -0.1
PABPC1-222ENST00000523555 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
PABPC1-222ENST00000523555 FBXO41Q8TF61 875 aa14.42□□□□□ -0.1
PABPC1-222ENST00000523555 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
PABPC1-222ENST00000523555 CLTCL1P53675 1640 aa14.38□□□□□ -0.11
PABPC1-222ENST00000523555 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
PABPC1-222ENST00000523555 SLC52A1Q9NWF4 448 aa14.38□□□□□ -0.11
PABPC1-222ENST00000523555 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
PABPC1-222ENST00000523555 ZFYVE9O95405 1425 aa14.37□□□□□ -0.11
PABPC1-222ENST00000523555 XIRP1Q702N8 1843 aaKnown RBP14.36□□□□□ -0.11
PABPC1-222ENST00000523555 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
PABPC1-222ENST00000523555 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-222ENST00000523555 TRPM2O94759 1503 aa14.35□□□□□ -0.11
PABPC1-222ENST00000523555 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
PABPC1-222ENST00000523555 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
PABPC1-222ENST00000523555 CPS1P31327 1500 aa14.34□□□□□ -0.11
PABPC1-222ENST00000523555 KIF1BO60333 1816 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms