RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 CAMSAP1Q5T5Y3 1602 aa19.94■□□□□ 0.78
TOP1MT-217ENST00000523417 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
TOP1MT-217ENST00000523417 FBXO31Q5XUX0 539 aaPredicted RBP19.92■□□□□ 0.78
TOP1MT-217ENST00000523417 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
TOP1MT-217ENST00000523417 LTBP4Q8N2S1 1624 aa19.91■□□□□ 0.78
TOP1MT-217ENST00000523417 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
TOP1MT-217ENST00000523417 PZPP20742 1482 aa19.9■□□□□ 0.78
TOP1MT-217ENST00000523417 IQSEC2Q5JU85 1478 aa19.9■□□□□ 0.78
TOP1MT-217ENST00000523417 TNRQ92752 1358 aa19.89■□□□□ 0.77
TOP1MT-217ENST00000523417 MAST1Q9Y2H9 1570 aa19.89■□□□□ 0.77
TOP1MT-217ENST00000523417 ZNF142P52746 1687 aaPredicted RBP19.88■□□□□ 0.77
TOP1MT-217ENST00000523417 CEP170BQ9Y4F5 1589 aaPredicted RBP19.88■□□□□ 0.77
TOP1MT-217ENST00000523417 KDM5DQ9BY66 1539 aa19.88■□□□□ 0.77
TOP1MT-217ENST00000523417 APLP2Q06481 763 aa19.88■□□□□ 0.77
TOP1MT-217ENST00000523417 MYO3AQ8NEV4 1616 aa19.86■□□□□ 0.77
TOP1MT-217ENST00000523417 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
TOP1MT-217ENST00000523417 DNMT1P26358 1616 aaKnown RBP19.83■□□□□ 0.76
TOP1MT-217ENST00000523417 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
TOP1MT-217ENST00000523417 NLRP1Q9C000 1473 aa19.82■□□□□ 0.76
TOP1MT-217ENST00000523417 ANKLE2Q86XL3 938 aa19.81■□□□□ 0.76
TOP1MT-217ENST00000523417 ABCC5O15440 1437 aa19.8■□□□□ 0.76
TOP1MT-217ENST00000523417 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
TOP1MT-217ENST00000523417 RNF17Q9BXT8 1623 aaKnown RBP19.79■□□□□ 0.76
TOP1MT-217ENST00000523417 DUOX2Q9NRD8 1548 aa19.78■□□□□ 0.76
TOP1MT-217ENST00000523417 SHANK2Q9UPX8 1470 aa19.78■□□□□ 0.76
TOP1MT-217ENST00000523417 ABCC3O15438 1527 aa19.77■□□□□ 0.76
TOP1MT-217ENST00000523417 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.76
TOP1MT-217ENST00000523417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
TOP1MT-217ENST00000523417 KIF15Q9NS87 1388 aa19.75■□□□□ 0.75
TOP1MT-217ENST00000523417 RRP7BPQ9NSQ0 103 aa19.75■□□□□ 0.75
TOP1MT-217ENST00000523417 ARHGAP31Q2M1Z3 1444 aa19.75■□□□□ 0.75
TOP1MT-217ENST00000523417 FGD6Q6ZV73 1430 aa19.75■□□□□ 0.75
TOP1MT-217ENST00000523417 ERBINQ96RT1 1412 aa19.74■□□□□ 0.75
TOP1MT-217ENST00000523417 MED14O60244 1454 aa19.73■□□□□ 0.75
TOP1MT-217ENST00000523417 DAPK1P53355 1430 aa19.73■□□□□ 0.75
TOP1MT-217ENST00000523417 SPATA31D1Q6ZQQ2 1576 aa19.73■□□□□ 0.75
TOP1MT-217ENST00000523417 UGGT1Q9NYU2 1555 aa19.72■□□□□ 0.75
TOP1MT-217ENST00000523417 MROH1Q8NDA8 1641 aa19.72■□□□□ 0.75
TOP1MT-217ENST00000523417 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
TOP1MT-217ENST00000523417 ERVK-7P63135 1459 aa19.71■□□□□ 0.75
TOP1MT-217ENST00000523417 ZC3H13Q5T200 1668 aaKnown RBP19.71■□□□□ 0.75
TOP1MT-217ENST00000523417 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
TOP1MT-217ENST00000523417 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
TOP1MT-217ENST00000523417 NEURL4Q96JN8 1562 aa19.69■□□□□ 0.74
TOP1MT-217ENST00000523417 NPHP4O75161 1426 aaPredicted RBP19.68■□□□□ 0.74
TOP1MT-217ENST00000523417 DEPDC5O75140 1603 aa19.66■□□□□ 0.74
TOP1MT-217ENST00000523417 CPS1P31327 1500 aa19.66■□□□□ 0.74
TOP1MT-217ENST00000523417 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
TOP1MT-217ENST00000523417 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
TOP1MT-217ENST00000523417 KANK1Q14678 1352 aa19.64■□□□□ 0.73
TOP1MT-217ENST00000523417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.731e-7■■■■□ 21.9
TOP1MT-217ENST00000523417 TOM1O60784 492 aa19.62■□□□□ 0.73
TOP1MT-217ENST00000523417 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
TOP1MT-217ENST00000523417 ADGRL2O95490 1459 aa19.61■□□□□ 0.73
TOP1MT-217ENST00000523417 POLR1AO95602 1720 aaPredicted RBP19.61■□□□□ 0.73
TOP1MT-217ENST00000523417 CROCC2H7BZ55 1655 aa19.61■□□□□ 0.73
TOP1MT-217ENST00000523417 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
TOP1MT-217ENST00000523417 LTKP29376 864 aa19.6■□□□□ 0.73
TOP1MT-217ENST00000523417 VWDEQ8N2E2 1590 aa19.6■□□□□ 0.73
TOP1MT-217ENST00000523417 DISP3Q9P2K9 1392 aa19.58■□□□□ 0.73
TOP1MT-217ENST00000523417 SLIT1O75093 1534 aa19.58■□□□□ 0.73
TOP1MT-217ENST00000523417 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
TOP1MT-217ENST00000523417 IDI1Q13907 227 aa19.57■□□□□ 0.72
TOP1MT-217ENST00000523417 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
TOP1MT-217ENST00000523417 SLC52A1Q9NWF4 448 aa19.56■□□□□ 0.72
TOP1MT-217ENST00000523417 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
TOP1MT-217ENST00000523417 CEP152O94986 1710 aa19.56■□□□□ 0.72
TOP1MT-217ENST00000523417 TMEM2Q9UHN6 1383 aa19.55■□□□□ 0.72
TOP1MT-217ENST00000523417 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
TOP1MT-217ENST00000523417 NOS1P29475 1434 aa19.54■□□□□ 0.72
TOP1MT-217ENST00000523417 UBR1Q8IWV7 1749 aa19.54■□□□□ 0.72
TOP1MT-217ENST00000523417 ANKRD50Q9ULJ7 1429 aa19.53■□□□□ 0.72
TOP1MT-217ENST00000523417 IQGAP1P46940 1657 aa19.52■□□□□ 0.72
TOP1MT-217ENST00000523417 ILDR2Q71H61 639 aa19.51■□□□□ 0.71
TOP1MT-217ENST00000523417 STAG3Q9UJ98 1225 aa19.51■□□□□ 0.71
TOP1MT-217ENST00000523417 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
TOP1MT-217ENST00000523417 CFAP65Q6ZU64 1925 aaKnown RBP19.49■□□□□ 0.71
TOP1MT-217ENST00000523417 ROCK1Q13464 1354 aa19.49■□□□□ 0.71
TOP1MT-217ENST00000523417 HSPA1LP34931 641 aa19.49■□□□□ 0.71
TOP1MT-217ENST00000523417 RPRD2Q5VT52 1461 aaKnown RBP19.48■□□□□ 0.71
TOP1MT-217ENST00000523417 PIP4K2BP78356 416 aa19.48■□□□□ 0.71
TOP1MT-217ENST00000523417 KDM5AP29375 1690 aaKnown RBP19.47■□□□□ 0.71
TOP1MT-217ENST00000523417 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
TOP1MT-217ENST00000523417 PIK3C2BO00750 1634 aa19.44■□□□□ 0.7
TOP1MT-217ENST00000523417 SOCS7O14512 581 aa19.44■□□□□ 0.7
TOP1MT-217ENST00000523417 KCNA6P17658 529 aa19.44■□□□□ 0.7
TOP1MT-217ENST00000523417 ALKQ9UM73 1620 aa19.43■□□□□ 0.7
TOP1MT-217ENST00000523417 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
TOP1MT-217ENST00000523417 SYNMO15061 1565 aa19.43■□□□□ 0.7
TOP1MT-217ENST00000523417 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
TOP1MT-217ENST00000523417 STRCP1A6NGW2 1772 aa19.42■□□□□ 0.7
TOP1MT-217ENST00000523417 TET3O43151 1660 aa19.41■□□□□ 0.7
TOP1MT-217ENST00000523417 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
TOP1MT-217ENST00000523417 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
TOP1MT-217ENST00000523417 ZFYVE9O95405 1425 aa19.35■□□□□ 0.69
TOP1MT-217ENST00000523417 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.69
TOP1MT-217ENST00000523417 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
TOP1MT-217ENST00000523417 PLEKHG1Q9ULL1 1385 aa19.34■□□□□ 0.69
TOP1MT-217ENST00000523417 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
TOP1MT-217ENST00000523417 NUP155O75694 1391 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms