RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 KNSTRNQ9Y448 316 aa5.25□□□□□ -1.57
HDAC2-215ENST00000523334 TRAPPC8Q9Y2L5 1435 aa5.25□□□□□ -1.57
HDAC2-215ENST00000523334 ARID4BQ4LE39 1312 aaPredicted RBP5.25□□□□□ -1.57
HDAC2-215ENST00000523334 CNTLNQ9NXG0 1405 aa5.25□□□□□ -1.57
HDAC2-215ENST00000523334 ADCY10Q96PN6 1610 aa5.25□□□□□ -1.57
HDAC2-215ENST00000523334 KDM6BO15054 1643 aa5.24□□□□□ -1.57
HDAC2-215ENST00000523334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC2-215ENST00000523334 ARHGEF5Q12774 1597 aa5.24□□□□□ -1.57
HDAC2-215ENST00000523334 DUOX2Q9NRD8 1548 aa5.24□□□□□ -1.57
HDAC2-215ENST00000523334 RAPGEF3O95398 923 aa5.24□□□□□ -1.57
HDAC2-215ENST00000523334 MLECQ14165 292 aa5.24□□□□□ -1.57
HDAC2-215ENST00000523334 SENP3Q9H4L4 574 aaPredicted RBP5.23□□□□□ -1.57
HDAC2-215ENST00000523334 ADGBQ8N7X0 1667 aa5.23□□□□□ -1.57
HDAC2-215ENST00000523334 ERBINQ96RT1 1412 aa5.23□□□□□ -1.57
HDAC2-215ENST00000523334 RALBP1Q15311 655 aa5.23□□□□□ -1.57
HDAC2-215ENST00000523334 NBPF1Q3BBV0 1214 aa5.23□□□□□ -1.57
HDAC2-215ENST00000523334 CDC42BPAQ5VT25 1732 aa5.23□□□□□ -1.57
HDAC2-215ENST00000523334 EIF3AQ14152 1382 aaKnown RBP5.23□□□□□ -1.57
HDAC2-215ENST00000523334 FAM135AQ9P2D6 1515 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 C11orf95C9JLR9 678 aaPredicted RBP5.22□□□□□ -1.57
HDAC2-215ENST00000523334 CC2D1BQ5T0F9 858 aaKnown RBP5.22□□□□□ -1.57
HDAC2-215ENST00000523334 SALL2Q9Y467 1007 aaPredicted RBP5.22□□□□□ -1.57
HDAC2-215ENST00000523334 DHX29Q7Z478 1369 aaKnown RBP5.22□□□□□ -1.57
HDAC2-215ENST00000523334 KTN1Q86UP2 1357 aaKnown RBP5.22□□□□□ -1.57
HDAC2-215ENST00000523334 WDR43Q15061 677 aaKnown RBP eCLIP5.22□□□□□ -1.57
HDAC2-215ENST00000523334 CLASP1Q7Z460 1538 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 RTEL1-TNFRSF6BF6WH68 1400 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 SAMD9LQ8IVG5 1584 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 PREX2Q70Z35 1606 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 TTC37Q6PGP7 1564 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 MYO5CQ9NQX4 1742 aa5.22□□□□□ -1.57
HDAC2-215ENST00000523334 SHROOM2Q13796 1616 aa5.21□□□□□ -1.57
HDAC2-215ENST00000523334 TEX14Q8IWB6 1497 aa5.21□□□□□ -1.57
HDAC2-215ENST00000523334 PLPPR3Q6T4P5 718 aa5.21□□□□□ -1.58
HDAC2-215ENST00000523334 SUPT16HQ9Y5B9 1047 aaKnown RBP5.21□□□□□ -1.58
HDAC2-215ENST00000523334 ZCCHC11Q5TAX3 1644 aaKnown RBP5.21□□□□□ -1.58
HDAC2-215ENST00000523334 VGFO15240 615 aaPredicted RBP5.21□□□□□ -1.58
HDAC2-215ENST00000523334 NLRP13Q86W25 1043 aa5.21□□□□□ -1.58
HDAC2-215ENST00000523334 PANK3Q9H999 370 aa5.2□□□□□ -1.58
HDAC2-215ENST00000523334 POGKQ9P215 609 aa5.2□□□□□ -1.58
HDAC2-215ENST00000523334 DENND4BO75064 1496 aaPredicted RBP5.2□□□□□ -1.58
HDAC2-215ENST00000523334 ZNF518AQ6AHZ1 1483 aa5.2□□□□□ -1.58
HDAC2-215ENST00000523334 SENP3-EIF4A1A0A087X0R7 540 aa5.2□□□□□ -1.58
HDAC2-215ENST00000523334 CFAP70Q5T0N1 1121 aa5.2□□□□□ -1.58
HDAC2-215ENST00000523334 TRAK1Q9UPV9 953 aa5.2□□□□□ -1.58
HDAC2-215ENST00000523334 ARHGEF12Q9NZN5 1544 aa5.19□□□□□ -1.58
HDAC2-215ENST00000523334 NUTM2DQ5VT03 806 aaPredicted RBP5.19□□□□□ -1.58
HDAC2-215ENST00000523334 MYBBP1AQ9BQG0 1328 aaKnown RBP5.19□□□□□ -1.58
HDAC2-215ENST00000523334 IRX6P78412 446 aaPredicted RBP5.19□□□□□ -1.58
HDAC2-215ENST00000523334 RALGAPBQ86X10 1494 aa5.19□□□□□ -1.58
HDAC2-215ENST00000523334 TRHP20396 242 aaPredicted RBP5.19□□□□□ -1.58
HDAC2-215ENST00000523334 STK26Q9P289 416 aa5.19□□□□□ -1.58
HDAC2-215ENST00000523334 A2MP01023 1474 aa5.19□□□□□ -1.58
HDAC2-215ENST00000523334 ABCC1P33527 1531 aa5.18□□□□□ -1.58
HDAC2-215ENST00000523334 HDGFP51858 240 aaKnown RBP5.18□□□□□ -1.58
HDAC2-215ENST00000523334 SAFB2Q14151 953 aaKnown RBP eCLIP5.18□□□□□ -1.58
HDAC2-215ENST00000523334 CDC42BPBQ9Y5S2 1711 aa5.18□□□□□ -1.58
HDAC2-215ENST00000523334 ATP7AQ04656 1500 aa5.18□□□□□ -1.58
HDAC2-215ENST00000523334 UHRF1BP1Q6BDS2 1440 aa5.18□□□□□ -1.58
HDAC2-215ENST00000523334 SLC52A1Q9NWF4 448 aa5.18□□□□□ -1.58
HDAC2-215ENST00000523334 PRAG1Q86YV5 1406 aa5.18□□□□□ -1.58
HDAC2-215ENST00000523334 CENPJQ9HC77 1338 aaPredicted RBP5.17□□□□□ -1.58
HDAC2-215ENST00000523334 ARAP3Q8WWN8 1544 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 CROCC2H7BZ55 1655 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 SRPK2P78362 688 aaKnown RBP5.17□□□□□ -1.58
HDAC2-215ENST00000523334 NEFMP07197 916 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 KDM5DQ9BY66 1539 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 ZBED9Q6R2W3 1325 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 CCDC184Q52MB2 194 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 CFAP53Q96M91 514 aa5.17□□□□□ -1.58
HDAC2-215ENST00000523334 RPGRIP1LQ68CZ1 1315 aa5.16□□□□□ -1.58
HDAC2-215ENST00000523334 MAST1Q9Y2H9 1570 aa5.16□□□□□ -1.58
HDAC2-215ENST00000523334 TMEM132EQ6IEE7 984 aa5.16□□□□□ -1.58
HDAC2-215ENST00000523334 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
HDAC2-215ENST00000523334 TNNT2P45379 298 aaPredicted RBP5.16□□□□□ -1.58
HDAC2-215ENST00000523334 PLXNC1O60486 1568 aa5.16□□□□□ -1.58
HDAC2-215ENST00000523334 SPATA31E1Q6ZUB1 1445 aa5.15□□□□□ -1.58
HDAC2-215ENST00000523334 BRD4O60885 1362 aaPredicted RBP5.15□□□□□ -1.58
HDAC2-215ENST00000523334 ADGRF5Q8IZF2 1346 aa5.15□□□□□ -1.58
HDAC2-215ENST00000523334 POGZQ7Z3K3 1410 aa5.15□□□□□ -1.59
HDAC2-215ENST00000523334 NEO1Q92859 1461 aa5.15□□□□□ -1.59
HDAC2-215ENST00000523334 ERICH6Q7L0X2 663 aa5.15□□□□□ -1.59
HDAC2-215ENST00000523334 CCDC136Q96JN2 1154 aa5.15□□□□□ -1.59
HDAC2-215ENST00000523334 EVC2Q86UK5 1308 aa5.15□□□□□ -1.59
HDAC2-215ENST00000523334 IDI1Q13907 227 aa5.14□□□□□ -1.59
HDAC2-215ENST00000523334 NUDCQ9Y266 331 aa5.14□□□□□ -1.59
HDAC2-215ENST00000523334 PPP4R2Q9NY27 417 aa5.14□□□□□ -1.59
HDAC2-215ENST00000523334 PLA2R1Q13018 1463 aa5.14□□□□□ -1.59
HDAC2-215ENST00000523334 CANXP27824 592 aaKnown RBP5.14□□□□□ -1.59
HDAC2-215ENST00000523334 ERICH6BQ5W0A0 696 aa5.14□□□□□ -1.59
HDAC2-215ENST00000523334 PNISRQ8TF01 805 aaKnown RBP5.14□□□□□ -1.59
HDAC2-215ENST00000523334 ZFYVE16Q7Z3T8 1539 aa5.14□□□□□ -1.59
HDAC2-215ENST00000523334 SCAF11Q99590 1463 aaKnown RBP5.13□□□□□ -1.59
HDAC2-215ENST00000523334 TESK2Q96S53 571 aa5.13□□□□□ -1.59
HDAC2-215ENST00000523334 PDE3BQ13370 1112 aa5.13□□□□□ -1.59
HDAC2-215ENST00000523334 HDGFL2Q7Z4V5 671 aaPredicted RBP5.13□□□□□ -1.59
HDAC2-215ENST00000523334 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.13□□□□□ -1.59
HDAC2-215ENST00000523334 TERF2IPQ9NYB0 399 aa5.13□□□□□ -1.59
HDAC2-215ENST00000523334 GPRASP1Q5JY77 1395 aa5.13□□□□□ -1.59
HDAC2-215ENST00000523334 ABCA9Q8IUA7 1624 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms