RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 PKNOX2Q96KN3 472 aa14.68□□□□□ -0.06
ERGIC1-211ENST00000523215 CCDC141Q6ZP82 1450 aa14.68□□□□□ -0.06
ERGIC1-211ENST00000523215 ATP1B4Q9UN42 357 aaPredicted RBP14.67□□□□□ -0.06
ERGIC1-211ENST00000523215 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
ERGIC1-211ENST00000523215 FAM135AQ9P2D6 1515 aa14.66□□□□□ -0.06
ERGIC1-211ENST00000523215 ATP10BO94823 1461 aa14.65□□□□□ -0.06
ERGIC1-211ENST00000523215 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
ERGIC1-211ENST00000523215 TET3O43151 1660 aa14.64□□□□□ -0.07
ERGIC1-211ENST00000523215 ABCC1P33527 1531 aa14.64□□□□□ -0.07
ERGIC1-211ENST00000523215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.64□□□□□ -0.07
ERGIC1-211ENST00000523215 ZBED9Q6R2W3 1325 aa14.63□□□□□ -0.07
ERGIC1-211ENST00000523215 TRPM2O94759 1503 aa14.62□□□□□ -0.07
ERGIC1-211ENST00000523215 TAOK2Q9UL54 1235 aa14.61□□□□□ -0.07
ERGIC1-211ENST00000523215 PLA2R1Q13018 1463 aa14.61□□□□□ -0.07
ERGIC1-211ENST00000523215 COL17A1Q9UMD9 1497 aaPredicted RBP14.61□□□□□ -0.07
ERGIC1-211ENST00000523215 ANP32EQ9BTT0 268 aa14.61□□□□□ -0.07
ERGIC1-211ENST00000523215 BLMP54132 1417 aaPredicted RBP14.61□□□□□ -0.07
ERGIC1-211ENST00000523215 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
ERGIC1-211ENST00000523215 NRXN1Q9ULB1 1477 aa14.6□□□□□ -0.07
ERGIC1-211ENST00000523215 KCNA4P22459 653 aa14.6□□□□□ -0.07
ERGIC1-211ENST00000523215 ZCCHC11Q5TAX3 1644 aaKnown RBP14.59□□□□□ -0.07
ERGIC1-211ENST00000523215 ERBINQ96RT1 1412 aa14.59□□□□□ -0.07
ERGIC1-211ENST00000523215 LMTK2Q8IWU2 1503 aa14.59□□□□□ -0.07
ERGIC1-211ENST00000523215 PLB1Q6P1J6 1458 aa14.58□□□□□ -0.08
ERGIC1-211ENST00000523215 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
ERGIC1-211ENST00000523215 PRAG1Q86YV5 1406 aa14.56□□□□□ -0.08
ERGIC1-211ENST00000523215 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
ERGIC1-211ENST00000523215 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
ERGIC1-211ENST00000523215 SETBP1Q9Y6X0 1596 aa14.55□□□□□ -0.08
ERGIC1-211ENST00000523215 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
ERGIC1-211ENST00000523215 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
ERGIC1-211ENST00000523215 PTPRTO14522 1441 aa14.54□□□□□ -0.08
ERGIC1-211ENST00000523215 ZFYVE16Q7Z3T8 1539 aa14.54□□□□□ -0.08
ERGIC1-211ENST00000523215 PRG4Q92954 1404 aaPredicted RBP14.54□□□□□ -0.08
ERGIC1-211ENST00000523215 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
ERGIC1-211ENST00000523215 C9orf84Q5VXU9 1444 aa14.54□□□□□ -0.08
ERGIC1-211ENST00000523215 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
ERGIC1-211ENST00000523215 PARD3Q8TEW0 1356 aa14.53□□□□□ -0.08
ERGIC1-211ENST00000523215 SHPRHQ149N8 1683 aa14.52□□□□□ -0.08
ERGIC1-211ENST00000523215 PRKRIP1Q9H875 184 aaPredicted RBP14.51□□□□□ -0.09
ERGIC1-211ENST00000523215 C11orf95C9JLR9 678 aaPredicted RBP14.51□□□□□ -0.09
ERGIC1-211ENST00000523215 A2MP01023 1474 aa14.5□□□□□ -0.09
ERGIC1-211ENST00000523215 RTEL1-TNFRSF6BF6WH68 1400 aa14.5□□□□□ -0.09
ERGIC1-211ENST00000523215 PDE4CQ08493 712 aa14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 NBPF8Q3BBV2 869 aa14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 MYOM2P54296 1465 aa14.49□□□□□ -0.09
ERGIC1-211ENST00000523215 PPLO60437 1756 aa14.48□□□□□ -0.09
ERGIC1-211ENST00000523215 ZNF518AQ6AHZ1 1483 aa14.48□□□□□ -0.09
ERGIC1-211ENST00000523215 CLTCL1P53675 1640 aa14.47□□□□□ -0.09
ERGIC1-211ENST00000523215 ANKRD26Q9UPS8 1709 aa14.47□□□□□ -0.09
ERGIC1-211ENST00000523215 ZNF644Q9H582 1327 aaPredicted RBP14.47□□□□□ -0.09
ERGIC1-211ENST00000523215 CARMIL2Q6F5E8 1435 aa14.46□□□□□ -0.09
ERGIC1-211ENST00000523215 ANP32CO43423 234 aa14.46□□□□□ -0.1
ERGIC1-211ENST00000523215 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.1
ERGIC1-211ENST00000523215 BRD4O60885 1362 aaPredicted RBP14.45□□□□□ -0.1
ERGIC1-211ENST00000523215 ANKRD30AQ9BXX3 1397 aa14.45□□□□□ -0.1
ERGIC1-211ENST00000523215 CLTCQ00610 1675 aaKnown RBP14.45□□□□□ -0.1
ERGIC1-211ENST00000523215 SYCP2Q9BX26 1530 aa14.45□□□□□ -0.1
ERGIC1-211ENST00000523215 MAP3K4Q9Y6R4 1608 aa14.45□□□□□ -0.1
ERGIC1-211ENST00000523215 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
ERGIC1-211ENST00000523215 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
ERGIC1-211ENST00000523215 MROH2AA6NES4 1674 aa14.44□□□□□ -0.1
ERGIC1-211ENST00000523215 NPM2Q86SE8 214 aaKnown RBP14.43□□□□□ -0.1
ERGIC1-211ENST00000523215 CCDC144AA2RUR9 1427 aa14.43□□□□□ -0.1
ERGIC1-211ENST00000523215 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
ERGIC1-211ENST00000523215 L3MBTL2Q969R5 705 aa14.43□□□□□ -0.1
ERGIC1-211ENST00000523215 EIF4G2P78344 907 aaKnown RBP eCLIP14.41□□□□□ -0.1
ERGIC1-211ENST00000523215 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
ERGIC1-211ENST00000523215 RBM19Q9Y4C8 960 aaKnown RBP14.4□□□□□ -0.1
ERGIC1-211ENST00000523215 CFAP74Q9C0B2 1584 aa14.4□□□□□ -0.1
ERGIC1-211ENST00000523215 MSH5O43196 834 aa14.39□□□□□ -0.11
ERGIC1-211ENST00000523215 USP47Q96K76 1375 aa14.39□□□□□ -0.11
ERGIC1-211ENST00000523215 FOXD1Q16676 465 aa14.39□□□□□ -0.11
ERGIC1-211ENST00000523215 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
ERGIC1-211ENST00000523215 EFCAB6Q5THR3 1501 aa14.37□□□□□ -0.11
ERGIC1-211ENST00000523215 KIF1BO60333 1816 aa14.37□□□□□ -0.11
ERGIC1-211ENST00000523215 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
ERGIC1-211ENST00000523215 FGD1P98174 961 aa14.36□□□□□ -0.11
ERGIC1-211ENST00000523215 ADGRB2O60241 1585 aa14.36□□□□□ -0.11
ERGIC1-211ENST00000523215 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
ERGIC1-211ENST00000523215 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
ERGIC1-211ENST00000523215 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
ERGIC1-211ENST00000523215 FANCAO15360 1455 aa14.34□□□□□ -0.11
ERGIC1-211ENST00000523215 PLCH2O75038 1416 aa14.33□□□□□ -0.11
ERGIC1-211ENST00000523215 PPP4R2Q9NY27 417 aa14.33□□□□□ -0.11
ERGIC1-211ENST00000523215 NEFLP07196 543 aa14.33□□□□□ -0.12
ERGIC1-211ENST00000523215 PIK3C2GO75747 1445 aa14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 CCDC184Q52MB2 194 aa14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 CHMP7Q8WUX9 453 aaPredicted RBP14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 CHMP4AQ9BY43 222 aa14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 ERCC6L2Q5T890 1561 aa14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 PNISRQ8TF01 805 aaKnown RBP14.31□□□□□ -0.12
ERGIC1-211ENST00000523215 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
ERGIC1-211ENST00000523215 PER1O15534 1290 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms