RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 TYW1BQ6NUM6 668 aa9.54□□□□□ -0.88
PCM1-217ENST00000522998 PHF14O94880 888 aa9.52□□□□□ -0.89
PCM1-217ENST00000522998 BCAMP50895 628 aa9.52□□□□□ -0.89
PCM1-217ENST00000522998 LAPTM4BQ86VI4 370 aa9.52□□□□□ -0.89
PCM1-217ENST00000522998 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
PCM1-217ENST00000522998 SOWAHBA6NEL2 793 aa9.5□□□□□ -0.89
PCM1-217ENST00000522998 KIAA1468Q9P260 1216 aa9.49□□□□□ -0.89
PCM1-217ENST00000522998 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
PCM1-217ENST00000522998 ZFRQ96KR1 1074 aaKnown RBP9.48□□□□□ -0.89
PCM1-217ENST00000522998 DCAF8L2P0C7V8 631 aa9.47□□□□□ -0.89
PCM1-217ENST00000522998 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
PCM1-217ENST00000522998 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
PCM1-217ENST00000522998 EPAS1Q99814 870 aa9.46□□□□□ -0.9
PCM1-217ENST00000522998 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
PCM1-217ENST00000522998 WBP1LQ9NX94 342 aa9.45□□□□□ -0.9
PCM1-217ENST00000522998 SEPT9Q9UHD8 586 aaPredicted RBP9.45□□□□□ -0.9
PCM1-217ENST00000522998 KCNC4Q03721 635 aa9.43□□□□□ -0.9
PCM1-217ENST00000522998 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
PCM1-217ENST00000522998 DPYSL4O14531 572 aa9.42□□□□□ -0.9
PCM1-217ENST00000522998 CAMK2BQ13554 666 aa9.42□□□□□ -0.9
PCM1-217ENST00000522998 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
PCM1-217ENST00000522998 RBM33Q96EV2 1170 aaKnown RBP9.41□□□□□ -0.9
PCM1-217ENST00000522998 Q6ZNB5 142 aa9.4□□□□□ -0.9
PCM1-217ENST00000522998 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
PCM1-217ENST00000522998 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
PCM1-217ENST00000522998 TSR3Q9UJK0 312 aaKnown RBP9.39□□□□□ -0.91
PCM1-217ENST00000522998 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
PCM1-217ENST00000522998 DDX12PQ92771 950 aa9.38□□□□□ -0.91
PCM1-217ENST00000522998 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
PCM1-217ENST00000522998 MAP3K7O43318 606 aa9.33□□□□□ -0.92
PCM1-217ENST00000522998 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
PCM1-217ENST00000522998 NBR1Q14596 966 aa9.33□□□□□ -0.92
PCM1-217ENST00000522998 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
PCM1-217ENST00000522998 PPP4CP60510 307 aa9.31□□□□□ -0.92
PCM1-217ENST00000522998 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
PCM1-217ENST00000522998 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
PCM1-217ENST00000522998 PDIA6Q15084 440 aa9.28□□□□□ -0.92
PCM1-217ENST00000522998 SPDYE16A6NNV3 312 aaPredicted RBP9.26□□□□□ -0.93
PCM1-217ENST00000522998 GFRA3O60609 400 aa9.26□□□□□ -0.93
PCM1-217ENST00000522998 SAMD7Q7Z3H4 446 aa9.26□□□□□ -0.93
PCM1-217ENST00000522998 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
PCM1-217ENST00000522998 SMAPO00193 183 aa9.25□□□□□ -0.93
PCM1-217ENST00000522998 PRSS12P56730 875 aa9.25□□□□□ -0.93
PCM1-217ENST00000522998 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
PCM1-217ENST00000522998 CERKQ8TCT0 537 aa9.24□□□□□ -0.93
PCM1-217ENST00000522998 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
PCM1-217ENST00000522998 NBPF26B4DH59 902 aa9.22□□□□□ -0.93
PCM1-217ENST00000522998 MTRQ99707 1265 aa9.22□□□□□ -0.93
PCM1-217ENST00000522998 IL21Q9HBE4 155 aa9.22□□□□□ -0.93
PCM1-217ENST00000522998 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
PCM1-217ENST00000522998 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
PCM1-217ENST00000522998 TATDN2Q93075 761 aa9.21□□□□□ -0.94
PCM1-217ENST00000522998 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
PCM1-217ENST00000522998 LCE2BO14633 110 aa9.2□□□□□ -0.94
PCM1-217ENST00000522998 BBXQ8WY36 941 aaPredicted RBP9.2□□□□□ -0.94
PCM1-217ENST00000522998 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
PCM1-217ENST00000522998 RNF40O75150 1001 aa9.19□□□□□ -0.94
PCM1-217ENST00000522998 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
PCM1-217ENST00000522998 PPP1R18Q6NYC8 613 aa9.19□□□□□ -0.94
PCM1-217ENST00000522998 C3orf80F5H4A9 247 aa9.18□□□□□ -0.94
PCM1-217ENST00000522998 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
PCM1-217ENST00000522998 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
PCM1-217ENST00000522998 V9GY48 417 aaPredicted RBP9.18□□□□□ -0.94
PCM1-217ENST00000522998 E2F4Q16254 413 aa9.17□□□□□ -0.94
PCM1-217ENST00000522998 ZNF516Q92618 1163 aa9.16□□□□□ -0.94
PCM1-217ENST00000522998 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
PCM1-217ENST00000522998 NUDT18Q6ZVK8 323 aa9.15□□□□□ -0.94
PCM1-217ENST00000522998 APLP1P51693 650 aa9.14□□□□□ -0.95
PCM1-217ENST00000522998 CDHR5Q9HBB8 845 aa9.14□□□□□ -0.95
PCM1-217ENST00000522998 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
PCM1-217ENST00000522998 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
PCM1-217ENST00000522998 ARIH1Q9Y4X5 557 aaPredicted RBP9.13□□□□□ -0.95
PCM1-217ENST00000522998 OSBPP22059 807 aa9.12□□□□□ -0.95
PCM1-217ENST00000522998 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
PCM1-217ENST00000522998 GGCXP38435 758 aa9.11□□□□□ -0.95
PCM1-217ENST00000522998 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
PCM1-217ENST00000522998 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
PCM1-217ENST00000522998 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
PCM1-217ENST00000522998 COPS2P61201 443 aa9.09□□□□□ -0.95
PCM1-217ENST00000522998 SLF2Q8IX21 1173 aa9.09□□□□□ -0.95
PCM1-217ENST00000522998 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
PCM1-217ENST00000522998 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.08□□□□□ -0.96
PCM1-217ENST00000522998 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
PCM1-217ENST00000522998 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
PCM1-217ENST00000522998 TTC13Q8NBP0 860 aa9.06□□□□□ -0.96
PCM1-217ENST00000522998 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
PCM1-217ENST00000522998 TMUB1Q9BVT8 246 aa9.05□□□□□ -0.96
PCM1-217ENST00000522998 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
PCM1-217ENST00000522998 ZPR1O75312 459 aa9.03□□□□□ -0.96
PCM1-217ENST00000522998 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
PCM1-217ENST00000522998 EYA1Q99502 592 aa9.01□□□□□ -0.97
PCM1-217ENST00000522998 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
PCM1-217ENST00000522998 CFAP44Q96MT7 982 aa9□□□□□ -0.97
PCM1-217ENST00000522998 PAXIP1Q6ZW49 1069 aaPredicted RBP8.99□□□□□ -0.97
PCM1-217ENST00000522998 SLC19A1P41440 591 aa8.98□□□□□ -0.97
PCM1-217ENST00000522998 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
PCM1-217ENST00000522998 BLOC1S3Q6QNY0 202 aa8.97□□□□□ -0.97
PCM1-217ENST00000522998 TRIM67Q6ZTA4 783 aa8.95□□□□□ -0.98
PCM1-217ENST00000522998 ZNF775Q96BV0 537 aaPredicted RBP8.95□□□□□ -0.98
PCM1-217ENST00000522998 DNAJB2P25686 324 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1711.2 ms