RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 KDM5DQ9BY66 1539 aa15.04■□□□□ -0
SDC2-207ENST00000522911 PZPP20742 1482 aa15.04■□□□□ -0
SDC2-207ENST00000522911 VPS8Q8N3P4 1428 aa15.02■□□□□ -0
SDC2-207ENST00000522911 DNMT1P26358 1616 aaKnown RBP15.02□□□□□ -0.01
SDC2-207ENST00000522911 LRRC9Q6ZRR7 1453 aa15.01□□□□□ -0.01
SDC2-207ENST00000522911 NCKAP5LQ9HCH0 1330 aa15.01□□□□□ -0.01
SDC2-207ENST00000522911 MAST1Q9Y2H9 1570 aa15□□□□□ -0.01
SDC2-207ENST00000522911 KIF3BO15066 747 aa15□□□□□ -0.01
SDC2-207ENST00000522911 NLRP1Q9C000 1473 aa15□□□□□ -0.01
SDC2-207ENST00000522911 TNRQ92752 1358 aa14.99□□□□□ -0.01
SDC2-207ENST00000522911 MIA2Q96PC5 1412 aa14.99□□□□□ -0.01
SDC2-207ENST00000522911 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
SDC2-207ENST00000522911 TSPY4P0CV99 314 aa14.98□□□□□ -0.01
SDC2-207ENST00000522911 TSPY10P0CW01 314 aa14.98□□□□□ -0.01
SDC2-207ENST00000522911 RNF17Q9BXT8 1623 aaKnown RBP14.98□□□□□ -0.01
SDC2-207ENST00000522911 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
SDC2-207ENST00000522911 MED14O60244 1454 aa14.95□□□□□ -0.02
SDC2-207ENST00000522911 NEURL4Q96JN8 1562 aa14.95□□□□□ -0.02
SDC2-207ENST00000522911 EIF2AK4Q9P2K8 1649 aaKnown RBP14.95□□□□□ -0.02
SDC2-207ENST00000522911 ZC3H13Q5T200 1668 aaKnown RBP14.94□□□□□ -0.02
SDC2-207ENST00000522911 CPS1P31327 1500 aa14.94□□□□□ -0.02
SDC2-207ENST00000522911 FBXO31Q5XUX0 539 aaPredicted RBP14.94□□□□□ -0.02
SDC2-207ENST00000522911 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
SDC2-207ENST00000522911 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
SDC2-207ENST00000522911 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
SDC2-207ENST00000522911 DEPDC5O75140 1603 aa14.93□□□□□ -0.02
SDC2-207ENST00000522911 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
SDC2-207ENST00000522911 SPATA31D1Q6ZQQ2 1576 aa14.92□□□□□ -0.02
SDC2-207ENST00000522911 ABCC3O15438 1527 aa14.92□□□□□ -0.02
SDC2-207ENST00000522911 UGGT1Q9NYU2 1555 aa14.91□□□□□ -0.02
SDC2-207ENST00000522911 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
SDC2-207ENST00000522911 SHANK2Q9UPX8 1470 aa14.9□□□□□ -0.02
SDC2-207ENST00000522911 FOXD1Q16676 465 aa14.9□□□□□ -0.02
SDC2-207ENST00000522911 MROH1Q8NDA8 1641 aa14.89□□□□□ -0.03
SDC2-207ENST00000522911 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
SDC2-207ENST00000522911 UBAP1LF5GYI3 381 aa14.89□□□□□ -0.03
SDC2-207ENST00000522911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.88□□□□□ -0.03
SDC2-207ENST00000522911 SOCS7O14512 581 aa14.88□□□□□ -0.03
SDC2-207ENST00000522911 KANK4Q5T7N3 995 aaPredicted RBP14.88□□□□□ -0.03
SDC2-207ENST00000522911 ARHGAP31Q2M1Z3 1444 aa14.88□□□□□ -0.03
SDC2-207ENST00000522911 ERVK-7P63135 1459 aa14.88□□□□□ -0.03
SDC2-207ENST00000522911 VWDEQ8N2E2 1590 aa14.87□□□□□ -0.03
SDC2-207ENST00000522911 ILDR2Q71H61 639 aa14.87□□□□□ -0.03
SDC2-207ENST00000522911 NPHP4O75161 1426 aaPredicted RBP14.86□□□□□ -0.03
SDC2-207ENST00000522911 ERBINQ96RT1 1412 aa14.86□□□□□ -0.03
SDC2-207ENST00000522911 PRDM15P57071 1507 aaPredicted RBP14.86□□□□□ -0.03
SDC2-207ENST00000522911 LOC105371045A0A1W2PR82 267 aa14.85□□□□□ -0.03
SDC2-207ENST00000522911 TOM1O60784 492 aa14.83□□□□□ -0.04
SDC2-207ENST00000522911 ABCC5O15440 1437 aa14.83□□□□□ -0.04
SDC2-207ENST00000522911 IQGAP1P46940 1657 aa14.82□□□□□ -0.04
SDC2-207ENST00000522911 KIF15Q9NS87 1388 aa14.82□□□□□ -0.04
SDC2-207ENST00000522911 ARHGAP23Q9P227 1491 aa14.82□□□□□ -0.04
SDC2-207ENST00000522911 SLIT1O75093 1534 aa14.82□□□□□ -0.04
SDC2-207ENST00000522911 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
SDC2-207ENST00000522911 SYNMO15061 1565 aa14.79□□□□□ -0.04
SDC2-207ENST00000522911 LMTK2Q8IWU2 1503 aa14.79□□□□□ -0.04
SDC2-207ENST00000522911 UBR1Q8IWV7 1749 aa14.79□□□□□ -0.04
SDC2-207ENST00000522911 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
SDC2-207ENST00000522911 ALKQ9UM73 1620 aa14.78□□□□□ -0.04
SDC2-207ENST00000522911 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
SDC2-207ENST00000522911 DAPK1P53355 1430 aa14.78□□□□□ -0.04
SDC2-207ENST00000522911 FGD6Q6ZV73 1430 aa14.78□□□□□ -0.04
SDC2-207ENST00000522911 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
SDC2-207ENST00000522911 CEP152O94986 1710 aa14.77□□□□□ -0.05
SDC2-207ENST00000522911 LRRC7Q96NW7 1537 aa14.76□□□□□ -0.05
SDC2-207ENST00000522911 HSPA1LP34931 641 aa14.75□□□□□ -0.05
SDC2-207ENST00000522911 APLP2Q06481 763 aa14.75□□□□□ -0.05
SDC2-207ENST00000522911 KANK1Q14678 1352 aa14.74□□□□□ -0.05
SDC2-207ENST00000522911 ANKRD30AQ9BXX3 1397 aa14.74□□□□□ -0.05
SDC2-207ENST00000522911 ADGRL2O95490 1459 aa14.74□□□□□ -0.05
SDC2-207ENST00000522911 RRP7BPQ9NSQ0 103 aa14.73□□□□□ -0.05
SDC2-207ENST00000522911 STRCP1A6NGW2 1772 aa14.73□□□□□ -0.05
SDC2-207ENST00000522911 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
SDC2-207ENST00000522911 LTKP29376 864 aa14.72□□□□□ -0.05
SDC2-207ENST00000522911 NOS1P29475 1434 aa14.71□□□□□ -0.05
SDC2-207ENST00000522911 MED1Q15648 1581 aaPredicted RBP14.71□□□□□ -0.05
SDC2-207ENST00000522911 PIP4K2BP78356 416 aa14.7□□□□□ -0.06
SDC2-207ENST00000522911 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
SDC2-207ENST00000522911 EID1Q9Y6B2 187 aa14.7□□□□□ -0.06
SDC2-207ENST00000522911 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
SDC2-207ENST00000522911 EFCAB6Q5THR3 1501 aa14.69□□□□□ -0.06
SDC2-207ENST00000522911 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
SDC2-207ENST00000522911 SLC52A1Q9NWF4 448 aa14.68□□□□□ -0.06
SDC2-207ENST00000522911 SCAF1Q9H7N4 1312 aaKnown RBP14.67□□□□□ -0.06
SDC2-207ENST00000522911 IDI1Q13907 227 aa14.67□□□□□ -0.06
SDC2-207ENST00000522911 TET3O43151 1660 aa14.66□□□□□ -0.06
SDC2-207ENST00000522911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.062e-7■□□□□ 10
SDC2-207ENST00000522911 CFAP65Q6ZU64 1925 aaKnown RBP14.64□□□□□ -0.07
SDC2-207ENST00000522911 ADGRB3O60242 1522 aa14.64□□□□□ -0.07
SDC2-207ENST00000522911 FAM135BQ49AJ0 1406 aa14.64□□□□□ -0.07
SDC2-207ENST00000522911 ANKRD50Q9ULJ7 1429 aa14.64□□□□□ -0.07
SDC2-207ENST00000522911 KCNA6P17658 529 aa14.62□□□□□ -0.07
SDC2-207ENST00000522911 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
SDC2-207ENST00000522911 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
SDC2-207ENST00000522911 XIRP1Q702N8 1843 aaKnown RBP14.62□□□□□ -0.07
SDC2-207ENST00000522911 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
SDC2-207ENST00000522911 NWD1Q149M9 1564 aa14.6□□□□□ -0.07
SDC2-207ENST00000522911 ZFYVE9O95405 1425 aa14.6□□□□□ -0.07
SDC2-207ENST00000522911 ROCK1Q13464 1354 aa14.6□□□□□ -0.07
SDC2-207ENST00000522911 TMEM94Q12767 1356 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms