RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 KDM5DQ9BY66 1539 aa22.39■■□□□ 1.17
HMBOX1-209ENST00000522468 KIF3BO15066 747 aa22.37■■□□□ 1.17
HMBOX1-209ENST00000522468 DNMT1P26358 1616 aaKnown RBP22.37■■□□□ 1.17
HMBOX1-209ENST00000522468 A2ML1A8K2U0 1454 aa22.36■■□□□ 1.17
HMBOX1-209ENST00000522468 PZPP20742 1482 aa22.36■■□□□ 1.17
HMBOX1-209ENST00000522468 RNF17Q9BXT8 1623 aaKnown RBP22.35■■□□□ 1.17
HMBOX1-209ENST00000522468 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
HMBOX1-209ENST00000522468 MIA2Q96PC5 1412 aa22.35■■□□□ 1.17
HMBOX1-209ENST00000522468 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
HMBOX1-209ENST00000522468 NCKAP5LQ9HCH0 1330 aa22.34■■□□□ 1.17
HMBOX1-209ENST00000522468 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
HMBOX1-209ENST00000522468 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
HMBOX1-209ENST00000522468 EIF2AK4Q9P2K8 1649 aaKnown RBP22.31■■□□□ 1.16
HMBOX1-209ENST00000522468 PKD2Q13563 968 aa22.31■■□□□ 1.16
HMBOX1-209ENST00000522468 FBXO31Q5XUX0 539 aaPredicted RBP22.3■■□□□ 1.16
HMBOX1-209ENST00000522468 MROH1Q8NDA8 1641 aa22.3■■□□□ 1.16
HMBOX1-209ENST00000522468 TNRQ92752 1358 aa22.29■■□□□ 1.16
HMBOX1-209ENST00000522468 POLR1AO95602 1720 aaPredicted RBP22.28■■□□□ 1.16
HMBOX1-209ENST00000522468 ZC3H13Q5T200 1668 aaKnown RBP22.28■■□□□ 1.16
HMBOX1-209ENST00000522468 WASHC2CQ9Y4E1 1318 aa22.28■■□□□ 1.16
HMBOX1-209ENST00000522468 NEURL4Q96JN8 1562 aa22.27■■□□□ 1.16
HMBOX1-209ENST00000522468 ABCC3O15438 1527 aa22.26■■□□□ 1.15
HMBOX1-209ENST00000522468 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
HMBOX1-209ENST00000522468 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
HMBOX1-209ENST00000522468 NLRP1Q9C000 1473 aa22.23■■□□□ 1.15
HMBOX1-209ENST00000522468 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
HMBOX1-209ENST00000522468 DUOX2Q9NRD8 1548 aa22.22■■□□□ 1.15
HMBOX1-209ENST00000522468 SPATA31D1Q6ZQQ2 1576 aa22.22■■□□□ 1.15
HMBOX1-209ENST00000522468 PTPN23Q9H3S7 1636 aa22.22■■□□□ 1.15
HMBOX1-209ENST00000522468 CEP152O94986 1710 aa22.2■■□□□ 1.14
HMBOX1-209ENST00000522468 ABCC5O15440 1437 aa22.2■■□□□ 1.14
HMBOX1-209ENST00000522468 UGGT1Q9NYU2 1555 aa22.18■■□□□ 1.14
HMBOX1-209ENST00000522468 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
HMBOX1-209ENST00000522468 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
HMBOX1-209ENST00000522468 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
HMBOX1-209ENST00000522468 MED14O60244 1454 aa22.15■■□□□ 1.14
HMBOX1-209ENST00000522468 FGD6Q6ZV73 1430 aa22.15■■□□□ 1.14
HMBOX1-209ENST00000522468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.15■■□□□ 1.14
HMBOX1-209ENST00000522468 KIF15Q9NS87 1388 aa22.14■■□□□ 1.14
HMBOX1-209ENST00000522468 DAPK1P53355 1430 aa22.14■■□□□ 1.13
HMBOX1-209ENST00000522468 ERBINQ96RT1 1412 aa22.14■■□□□ 1.13
HMBOX1-209ENST00000522468 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
HMBOX1-209ENST00000522468 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
HMBOX1-209ENST00000522468 CFAP65Q6ZU64 1925 aaKnown RBP22.12■■□□□ 1.13
HMBOX1-209ENST00000522468 UBR1Q8IWV7 1749 aa22.11■■□□□ 1.13
HMBOX1-209ENST00000522468 ARHGAP31Q2M1Z3 1444 aa22.1■■□□□ 1.13
HMBOX1-209ENST00000522468 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
HMBOX1-209ENST00000522468 CPS1P31327 1500 aa22.1■■□□□ 1.13
HMBOX1-209ENST00000522468 APLP2Q06481 763 aa22.09■■□□□ 1.13
HMBOX1-209ENST00000522468 IQGAP1P46940 1657 aa22.09■■□□□ 1.13
HMBOX1-209ENST00000522468 NPHP4O75161 1426 aaPredicted RBP22.07■■□□□ 1.12
HMBOX1-209ENST00000522468 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
HMBOX1-209ENST00000522468 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
HMBOX1-209ENST00000522468 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
HMBOX1-209ENST00000522468 LMTK2Q8IWU2 1503 aa22.03■■□□□ 1.12
HMBOX1-209ENST00000522468 ADGRL2O95490 1459 aa22.02■■□□□ 1.12
HMBOX1-209ENST00000522468 ARHGAP23Q9P227 1491 aa22.02■■□□□ 1.12
HMBOX1-209ENST00000522468 SLIT1O75093 1534 aa22.01■■□□□ 1.11
HMBOX1-209ENST00000522468 DISP3Q9P2K9 1392 aa22.01■■□□□ 1.11
HMBOX1-209ENST00000522468 ANKRD30AQ9BXX3 1397 aa22■■□□□ 1.11
HMBOX1-209ENST00000522468 ALKQ9UM73 1620 aa21.99■■□□□ 1.11
HMBOX1-209ENST00000522468 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
HMBOX1-209ENST00000522468 KDM5AP29375 1690 aaKnown RBP21.98■■□□□ 1.11
HMBOX1-209ENST00000522468 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
HMBOX1-209ENST00000522468 ILDR2Q71H61 639 aa21.96■■□□□ 1.11
HMBOX1-209ENST00000522468 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
HMBOX1-209ENST00000522468 KANK1Q14678 1352 aa21.95■■□□□ 1.1
HMBOX1-209ENST00000522468 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
HMBOX1-209ENST00000522468 SYNMO15061 1565 aa21.95■■□□□ 1.1
HMBOX1-209ENST00000522468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.14e-11■□□□□ 10.9
HMBOX1-209ENST00000522468 LTKP29376 864 aa21.93■■□□□ 1.1
HMBOX1-209ENST00000522468 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
HMBOX1-209ENST00000522468 NOS1P29475 1434 aa21.91■■□□□ 1.1
HMBOX1-209ENST00000522468 TMEM2Q9UHN6 1383 aa21.89■■□□□ 1.1
HMBOX1-209ENST00000522468 TOM1O60784 492 aa21.89■■□□□ 1.09
HMBOX1-209ENST00000522468 ANKRD50Q9ULJ7 1429 aa21.88■■□□□ 1.09
HMBOX1-209ENST00000522468 XIRP1Q702N8 1843 aaKnown RBP21.87■■□□□ 1.09
HMBOX1-209ENST00000522468 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
HMBOX1-209ENST00000522468 HSPA1LP34931 641 aa21.86■■□□□ 1.09
HMBOX1-209ENST00000522468 IDI1Q13907 227 aa21.86■■□□□ 1.09
HMBOX1-209ENST00000522468 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
HMBOX1-209ENST00000522468 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
HMBOX1-209ENST00000522468 TET3O43151 1660 aa21.85■■□□□ 1.09
HMBOX1-209ENST00000522468 RPRD2Q5VT52 1461 aaKnown RBP21.84■■□□□ 1.09
HMBOX1-209ENST00000522468 UNC13BO14795 1591 aa21.84■■□□□ 1.09
HMBOX1-209ENST00000522468 PIP4K2BP78356 416 aa21.84■■□□□ 1.09
HMBOX1-209ENST00000522468 GCC2Q8IWJ2 1684 aa21.82■■□□□ 1.08
HMBOX1-209ENST00000522468 EID1Q9Y6B2 187 aa21.81■■□□□ 1.08
HMBOX1-209ENST00000522468 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
HMBOX1-209ENST00000522468 SOCS7O14512 581 aa21.8■■□□□ 1.08
HMBOX1-209ENST00000522468 MYO5BQ9ULV0 1848 aa21.79■■□□□ 1.08
HMBOX1-209ENST00000522468 ROCK1Q13464 1354 aa21.78■■□□□ 1.08
HMBOX1-209ENST00000522468 SLC52A1Q9NWF4 448 aa21.78■■□□□ 1.08
HMBOX1-209ENST00000522468 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
HMBOX1-209ENST00000522468 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
HMBOX1-209ENST00000522468 E9PCH4 1651 aa21.75■■□□□ 1.07
HMBOX1-209ENST00000522468 TMEM131LA2VDJ0 1609 aa21.75■■□□□ 1.07
HMBOX1-209ENST00000522468 IQGAP3Q86VI3 1631 aa21.75■■□□□ 1.07
HMBOX1-209ENST00000522468 ZFYVE9O95405 1425 aa21.74■■□□□ 1.07
HMBOX1-209ENST00000522468 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms