RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 SKAP1Q86WV1 359 aa12.62□□□□□ -0.39
CTNNA1-230ENST00000521724 RPRD2Q5VT52 1461 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-230ENST00000521724 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-230ENST00000521724 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
CTNNA1-230ENST00000521724 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
CTNNA1-230ENST00000521724 TEX14Q8IWB6 1497 aa12.61□□□□□ -0.39
CTNNA1-230ENST00000521724 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
CTNNA1-230ENST00000521724 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
CTNNA1-230ENST00000521724 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-230ENST00000521724 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
CTNNA1-230ENST00000521724 PLIN1O60240 522 aa12.58□□□□□ -0.4
CTNNA1-230ENST00000521724 NUP153P49790 1475 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-230ENST00000521724 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
CTNNA1-230ENST00000521724 DISP1Q96F81 1524 aa12.58□□□□□ -0.4
CTNNA1-230ENST00000521724 USP47Q96K76 1375 aa12.57□□□□□ -0.4
CTNNA1-230ENST00000521724 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
CTNNA1-230ENST00000521724 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
CTNNA1-230ENST00000521724 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
CTNNA1-230ENST00000521724 PRG4Q92954 1404 aaPredicted RBP12.57□□□□□ -0.4
CTNNA1-230ENST00000521724 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
CTNNA1-230ENST00000521724 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-230ENST00000521724 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-230ENST00000521724 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
CTNNA1-230ENST00000521724 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
CTNNA1-230ENST00000521724 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-230ENST00000521724 PZPP20742 1482 aa12.55□□□□□ -0.4
CTNNA1-230ENST00000521724 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-230ENST00000521724 ROCK2O75116 1388 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-230ENST00000521724 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
CTNNA1-230ENST00000521724 FAM161AQ3B820 660 aa12.53□□□□□ -0.4
CTNNA1-230ENST00000521724 RALBP1Q15311 655 aa12.53□□□□□ -0.4
CTNNA1-230ENST00000521724 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-230ENST00000521724 KIAA0556O60303 1618 aa12.52□□□□□ -0.4
CTNNA1-230ENST00000521724 PKD2Q13563 968 aa12.52□□□□□ -0.41
CTNNA1-230ENST00000521724 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
CTNNA1-230ENST00000521724 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-230ENST00000521724 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-230ENST00000521724 C8orf34Q49A92 452 aa12.51□□□□□ -0.41
CTNNA1-230ENST00000521724 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
CTNNA1-230ENST00000521724 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
CTNNA1-230ENST00000521724 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-230ENST00000521724 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 POGKQ9P215 609 aa12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 CAMSAP2Q08AD1 1489 aa12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 RAPGEF6Q8TEU7 1601 aa12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 ZMYND15Q9H091 742 aa12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
CTNNA1-230ENST00000521724 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-230ENST00000521724 GPATCH8Q9UKJ3 1502 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-230ENST00000521724 KDM5CP41229 1560 aa12.48□□□□□ -0.41
CTNNA1-230ENST00000521724 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-230ENST00000521724 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
CTNNA1-230ENST00000521724 KIF14Q15058 1648 aa12.47□□□□□ -0.41
CTNNA1-230ENST00000521724 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
CTNNA1-230ENST00000521724 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
CTNNA1-230ENST00000521724 TROQ12816 1431 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-230ENST00000521724 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
CTNNA1-230ENST00000521724 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
CTNNA1-230ENST00000521724 NAP1L5Q96NT1 182 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-230ENST00000521724 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
CTNNA1-230ENST00000521724 RGS3P49796 1198 aa12.46□□□□□ -0.41
CTNNA1-230ENST00000521724 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-230ENST00000521724 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-230ENST00000521724 KIAA1107Q9UPP5 1409 aa12.46□□□□□ -0.42
CTNNA1-230ENST00000521724 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
CTNNA1-230ENST00000521724 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-230ENST00000521724 ST20-MTHFSA0A0A6YYL1 179 aa12.43□□□□□ -0.42
CTNNA1-230ENST00000521724 HSP90AA1P07900 732 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-230ENST00000521724 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
CTNNA1-230ENST00000521724 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
CTNNA1-230ENST00000521724 NUP155O75694 1391 aa12.42□□□□□ -0.42
CTNNA1-230ENST00000521724 ANKRD50Q9ULJ7 1429 aa12.42□□□□□ -0.42
CTNNA1-230ENST00000521724 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-230ENST00000521724 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
CTNNA1-230ENST00000521724 ANKRD30AQ9BXX3 1397 aa12.4□□□□□ -0.42
CTNNA1-230ENST00000521724 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■■■■■ 32.5
CTNNA1-230ENST00000521724 BECN1Q14457 450 aa12.4□□□□□ -0.42
CTNNA1-230ENST00000521724 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
CTNNA1-230ENST00000521724 PARD3Q8TEW0 1356 aa12.4□□□□□ -0.43
CTNNA1-230ENST00000521724 CLCN1P35523 988 aa12.39□□□□□ -0.43
CTNNA1-230ENST00000521724 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
CTNNA1-230ENST00000521724 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
CTNNA1-230ENST00000521724 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
CTNNA1-230ENST00000521724 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-230ENST00000521724 XRCC6P12956 609 aaKnown RBP eCLIP12.37□□□□□ -0.43
CTNNA1-230ENST00000521724 PLEKHD1A6NEE1 506 aa12.37□□□□□ -0.43
CTNNA1-230ENST00000521724 E9PCH4 1651 aa12.37□□□□□ -0.43
CTNNA1-230ENST00000521724 BLMP54132 1417 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-230ENST00000521724 CROCC2H7BZ55 1655 aa12.36□□□□□ -0.43
CTNNA1-230ENST00000521724 UHRF1BP1Q6BDS2 1440 aa12.36□□□□□ -0.43
CTNNA1-230ENST00000521724 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
CTNNA1-230ENST00000521724 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
CTNNA1-230ENST00000521724 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
CTNNA1-230ENST00000521724 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
CTNNA1-230ENST00000521724 C9orf84Q5VXU9 1444 aa12.35□□□□□ -0.43
CTNNA1-230ENST00000521724 USP19O94966 1318 aa12.35□□□□□ -0.43
CTNNA1-230ENST00000521724 ATP10BO94823 1461 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
CTNNA1-230ENST00000521724 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms