RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 ZMYND10O75800 440 aa6.7□□□□□ -1.34
NPM1-207ENST00000521260 LETM1O95202 739 aaPredicted RBP6.7□□□□□ -1.34
NPM1-207ENST00000521260 IRX3P78415 501 aaPredicted RBP6.7□□□□□ -1.34
NPM1-207ENST00000521260 CAMK2BQ13554 666 aa6.7□□□□□ -1.34
NPM1-207ENST00000521260 MS4A4AQ96JQ5 239 aa6.7□□□□□ -1.34
NPM1-207ENST00000521260 GTPBP4Q9BZE4 634 aaKnown RBP6.7□□□□□ -1.34
NPM1-207ENST00000521260 CHMP4BQ9H444 224 aaKnown RBP6.7□□□□□ -1.34
NPM1-207ENST00000521260 CABP2Q9NPB3 220 aa6.7□□□□□ -1.34
NPM1-207ENST00000521260 TCERG1O14776 1098 aaKnown RBP6.69□□□□□ -1.34
NPM1-207ENST00000521260 CLSTN1O94985 981 aa6.69□□□□□ -1.34
NPM1-207ENST00000521260 MS4A1P11836 297 aa6.69□□□□□ -1.34
NPM1-207ENST00000521260 MCCP23508 829 aa6.68□□□□□ -1.34
NPM1-207ENST00000521260 RGS3P49796 1198 aa6.68□□□□□ -1.34
NPM1-207ENST00000521260 FRAT1Q92837 279 aaPredicted RBP6.68□□□□□ -1.34
NPM1-207ENST00000521260 SLC24A3Q9HC58 644 aa6.68□□□□□ -1.34
NPM1-207ENST00000521260 CCDC9Q9Y3X0 531 aaKnown RBP6.68□□□□□ -1.34
NPM1-207ENST00000521260 PDE4AP27815 886 aa6.67□□□□□ -1.34
NPM1-207ENST00000521260 TSPYL1Q9H0U9 437 aa6.67□□□□□ -1.34
NPM1-207ENST00000521260 SLC20A2Q08357 652 aa6.65□□□□□ -1.34
NPM1-207ENST00000521260 DMTNQ08495 405 aa6.65□□□□□ -1.34
NPM1-207ENST00000521260 NFKBIBQ15653 356 aa6.65□□□□□ -1.34
NPM1-207ENST00000521260 BARGINQ6ZT62 677 aa6.65□□□□□ -1.34
NPM1-207ENST00000521260 DNAJC2Q99543 621 aaKnown RBP6.65□□□□□ -1.34
NPM1-207ENST00000521260 LARP6Q9BRS8 491 aaKnown RBP6.65□□□□□ -1.34
NPM1-207ENST00000521260 PHF14O94880 888 aa6.64□□□□□ -1.35
NPM1-207ENST00000521260 APPP05067 770 aa6.64□□□□□ -1.35
NPM1-207ENST00000521260 SETQ01105 290 aaPredicted RBP6.64□□□□□ -1.35
NPM1-207ENST00000521260 NEUROD2Q15784 382 aa6.64□□□□□ -1.35
NPM1-207ENST00000521260 DNTTIP2Q5QJE6 756 aaKnown RBP6.64□□□□□ -1.35
NPM1-207ENST00000521260 SMYD5Q6GMV2 418 aa6.64□□□□□ -1.35
NPM1-207ENST00000521260 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.64□□□□□ -1.35
NPM1-207ENST00000521260 TICAM2Q86XR7 235 aa6.64□□□□□ -1.35
NPM1-207ENST00000521260 ILDR1Q86SU0 546 aaPredicted RBP6.63□□□□□ -1.35
NPM1-207ENST00000521260 CEP120Q8N960 986 aa6.63□□□□□ -1.35
NPM1-207ENST00000521260 SECISBP2LQ93073 1101 aaKnown RBP6.63□□□□□ -1.35
NPM1-207ENST00000521260 DDX27Q96GQ7 796 aaKnown RBP6.63□□□□□ -1.35
NPM1-207ENST00000521260 MMP14P50281 582 aa6.62□□□□□ -1.35
NPM1-207ENST00000521260 PPP4R3BQ5MIZ7 849 aa6.62□□□□□ -1.35
NPM1-207ENST00000521260 YY1AP1Q9H869 796 aa6.62□□□□□ -1.35
NPM1-207ENST00000521260 RRAGDQ9NQL2 400 aaPredicted RBP6.61□□□□□ -1.35
NPM1-207ENST00000521260 FAM193AP78312 1265 aa6.6□□□□□ -1.35
NPM1-207ENST00000521260 GRIPAP1Q4V328 841 aa6.6□□□□□ -1.35
NPM1-207ENST00000521260 CC2D1BQ5T0F9 858 aaKnown RBP6.6□□□□□ -1.35
NPM1-207ENST00000521260 RGS22Q8NE09 1264 aa6.6□□□□□ -1.35
NPM1-207ENST00000521260 PLCD4Q9BRC7 762 aa6.6□□□□□ -1.35
NPM1-207ENST00000521260 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.6□□□□□ -1.35
NPM1-207ENST00000521260 NCAPD3P42695 1498 aa6.6□□□□□ -1.35
NPM1-207ENST00000521260 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
NPM1-207ENST00000521260 MRE11P49959 708 aa6.59□□□□□ -1.35
NPM1-207ENST00000521260 PIP4P2Q8N4L2 257 aa6.59□□□□□ -1.35
NPM1-207ENST00000521260 CCDC66A2RUB6 948 aa6.58□□□□□ -1.36
NPM1-207ENST00000521260 ESPNB1AK53 854 aa6.58□□□□□ -1.36
NPM1-207ENST00000521260 DYNC1I1O14576 645 aa6.58□□□□□ -1.36
NPM1-207ENST00000521260 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
NPM1-207ENST00000521260 MYH16Q9H6N6 1097 aa6.58□□□□□ -1.36
NPM1-207ENST00000521260 TMEM51Q9NW97 253 aa6.58□□□□□ -1.36
NPM1-207ENST00000521260 CNPY4Q8N129 248 aa6.57□□□□□ -1.36
NPM1-207ENST00000521260 TRIM52Q96A61 297 aa6.57□□□□□ -1.36
NPM1-207ENST00000521260 GPHNQ9NQX3 736 aaPredicted RBP6.57□□□□□ -1.36
NPM1-207ENST00000521260 ZRANB1Q9UGI0 708 aa6.57□□□□□ -1.36
NPM1-207ENST00000521260 HDAC5Q9UQL6 1122 aa6.57□□□□□ -1.36
NPM1-207ENST00000521260 CALRP27797 417 aaKnown RBP6.56□□□□□ -1.36
NPM1-207ENST00000521260 MLLT3P42568 568 aaPredicted RBP6.56□□□□□ -1.36
NPM1-207ENST00000521260 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
NPM1-207ENST00000521260 B4GALNT3Q6L9W6 998 aa6.56□□□□□ -1.36
NPM1-207ENST00000521260 WWC1Q8IX03 1113 aa6.56□□□□□ -1.36
NPM1-207ENST00000521260 AK7Q96M32 723 aa6.56□□□□□ -1.36
NPM1-207ENST00000521260 PHF12Q96QT6 1004 aa6.56□□□□□ -1.36
NPM1-207ENST00000521260 CCDC94Q9BW85 323 aaPredicted RBP6.56□□□□□ -1.36
NPM1-207ENST00000521260 GEMIN8Q9NWZ8 242 aaKnown RBP6.56□□□□□ -1.36
NPM1-207ENST00000521260 MSNP26038 577 aaKnown RBP6.55□□□□□ -1.36
NPM1-207ENST00000521260 BECN1Q14457 450 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 RALBP1Q15311 655 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 PPP1R15BQ5SWA1 713 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 RBM26Q5T8P6 1007 aaKnown RBP6.55□□□□□ -1.36
NPM1-207ENST00000521260 CTR9Q6PD62 1173 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 CHRDL2Q6WN34 429 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 TMEM106CQ9BVX2 250 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 TRPC6Q9Y210 931 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 NACADO15069 1562 aa6.55□□□□□ -1.36
NPM1-207ENST00000521260 PATL2C9JE40 543 aaKnown RBP6.54□□□□□ -1.36
NPM1-207ENST00000521260 OFD1O75665 1012 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 CD44P16070 742 aaKnown RBP6.54□□□□□ -1.36
NPM1-207ENST00000521260 KIAA1211Q6ZU35 1233 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 DCAF11Q8TEB1 546 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 PSMD1Q99460 953 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 BACH2Q9BYV9 841 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 PHLDB1Q86UU1 1377 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 NINLQ9Y2I6 1382 aa6.54□□□□□ -1.36
NPM1-207ENST00000521260 ZBED9Q6R2W3 1325 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 GPR37O15354 613 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 TIE1P35590 1138 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 PDIA6Q15084 440 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 HS1BP3Q53T59 392 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 CREBRFQ8IUR6 639 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 GPIHBP1Q8IV16 184 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 EFCC1Q9HA90 598 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 EMILIN3Q9NT22 766 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 TNIKQ9UKE5 1360 aa6.53□□□□□ -1.36
NPM1-207ENST00000521260 SPDYE16A6NNV3 312 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms