RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
PABPC1-216ENST00000520868 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
PABPC1-216ENST00000520868 COL9A1P20849 921 aa12.93□□□□□ -0.34
PABPC1-216ENST00000520868 PTGER2P43116 358 aa12.93□□□□□ -0.34
PABPC1-216ENST00000520868 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
PABPC1-216ENST00000520868 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
PABPC1-216ENST00000520868 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
PABPC1-216ENST00000520868 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
PABPC1-216ENST00000520868 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
PABPC1-216ENST00000520868 NBR1Q14596 966 aa12.9□□□□□ -0.34
PABPC1-216ENST00000520868 EPAS1Q99814 870 aa12.9□□□□□ -0.34
PABPC1-216ENST00000520868 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
PABPC1-216ENST00000520868 PROX2Q3B8N5 592 aa12.88□□□□□ -0.35
PABPC1-216ENST00000520868 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
PABPC1-216ENST00000520868 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
PABPC1-216ENST00000520868 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
PABPC1-216ENST00000520868 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
PABPC1-216ENST00000520868 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
PABPC1-216ENST00000520868 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
PABPC1-216ENST00000520868 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-216ENST00000520868 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-216ENST00000520868 MAP3K7O43318 606 aa12.82□□□□□ -0.36
PABPC1-216ENST00000520868 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-216ENST00000520868 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
PABPC1-216ENST00000520868 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
PABPC1-216ENST00000520868 OSBPP22059 807 aa12.79□□□□□ -0.36
PABPC1-216ENST00000520868 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
PABPC1-216ENST00000520868 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
PABPC1-216ENST00000520868 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
PABPC1-216ENST00000520868 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
PABPC1-216ENST00000520868 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
PABPC1-216ENST00000520868 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
PABPC1-216ENST00000520868 TSKSQ9UJT2 592 aa12.71□□□□□ -0.37
PABPC1-216ENST00000520868 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
PABPC1-216ENST00000520868 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
PABPC1-216ENST00000520868 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-216ENST00000520868 SEMA3EO15041 775 aa12.69□□□□□ -0.38
PABPC1-216ENST00000520868 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
PABPC1-216ENST00000520868 PTPN5P54829 565 aa12.67□□□□□ -0.38
PABPC1-216ENST00000520868 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
PABPC1-216ENST00000520868 WNT2BQ93097 391 aa12.67□□□□□ -0.38
PABPC1-216ENST00000520868 HCSTQ9UBK5 93 aa12.67□□□□□ -0.38
PABPC1-216ENST00000520868 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
PABPC1-216ENST00000520868 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
PABPC1-216ENST00000520868 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
PABPC1-216ENST00000520868 NPDC1Q9NQX5 325 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-216ENST00000520868 ONECUT3O60422 494 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-216ENST00000520868 PRSS12P56730 875 aa12.64□□□□□ -0.39
PABPC1-216ENST00000520868 SMAPO00193 183 aa12.63□□□□□ -0.39
PABPC1-216ENST00000520868 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
PABPC1-216ENST00000520868 BCAMP50895 628 aa12.61□□□□□ -0.39
PABPC1-216ENST00000520868 ZFRQ96KR1 1074 aaKnown RBP12.61□□□□□ -0.39
PABPC1-216ENST00000520868 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-216ENST00000520868 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
PABPC1-216ENST00000520868 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
PABPC1-216ENST00000520868 PACS2Q86VP3 889 aa12.58□□□□□ -0.4
PABPC1-216ENST00000520868 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
PABPC1-216ENST00000520868 FAM98CQ17RN3 349 aaKnown RBP12.56□□□□□ -0.4
PABPC1-216ENST00000520868 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
PABPC1-216ENST00000520868 TATDN2Q93075 761 aa12.55□□□□□ -0.4
PABPC1-216ENST00000520868 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
PABPC1-216ENST00000520868 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
PABPC1-216ENST00000520868 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
PABPC1-216ENST00000520868 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
PABPC1-216ENST00000520868 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
PABPC1-216ENST00000520868 PTGDRQ13258 359 aa12.52□□□□□ -0.41
PABPC1-216ENST00000520868 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
PABPC1-216ENST00000520868 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
PABPC1-216ENST00000520868 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-216ENST00000520868 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
PABPC1-216ENST00000520868 WBP1LQ9NX94 342 aa12.49□□□□□ -0.41
PABPC1-216ENST00000520868 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
PABPC1-216ENST00000520868 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-216ENST00000520868 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
PABPC1-216ENST00000520868 FCHSD2O94868 740 aa12.46□□□□□ -0.41
PABPC1-216ENST00000520868 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
PABPC1-216ENST00000520868 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
PABPC1-216ENST00000520868 EYA1Q99502 592 aa12.42□□□□□ -0.42
PABPC1-216ENST00000520868 TSR3Q9UJK0 312 aaKnown RBP12.41□□□□□ -0.42
PABPC1-216ENST00000520868 GPR37O15354 613 aa12.4□□□□□ -0.42
PABPC1-216ENST00000520868 HIC1Q14526 733 aa12.4□□□□□ -0.42
PABPC1-216ENST00000520868 FECHP22830 423 aa12.39□□□□□ -0.43
PABPC1-216ENST00000520868 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
PABPC1-216ENST00000520868 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
PABPC1-216ENST00000520868 ADGRG1Q9Y653 693 aa12.38□□□□□ -0.43
PABPC1-216ENST00000520868 RNF40O75150 1001 aa12.37□□□□□ -0.43
PABPC1-216ENST00000520868 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
PABPC1-216ENST00000520868 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
PABPC1-216ENST00000520868 PPP4CP60510 307 aa12.36□□□□□ -0.43
PABPC1-216ENST00000520868 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
PABPC1-216ENST00000520868 GNPATO15228 680 aa12.33□□□□□ -0.44
PABPC1-216ENST00000520868 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
PABPC1-216ENST00000520868 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
PABPC1-216ENST00000520868 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
PABPC1-216ENST00000520868 ITGBL1O95965 494 aaPredicted RBP12.29□□□□□ -0.44
PABPC1-216ENST00000520868 OATP04181 439 aa12.29□□□□□ -0.44
PABPC1-216ENST00000520868 APLP1P51693 650 aa12.29□□□□□ -0.44
PABPC1-216ENST00000520868 SLC4A3P48751 1232 aa12.28□□□□□ -0.44
PABPC1-216ENST00000520868 DNAJB2P25686 324 aa12.27□□□□□ -0.45
PABPC1-216ENST00000520868 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms