RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 NYAP1Q6ZVC0 841 aa6.64□□□□□ -1.35
PABPC1-211ENST00000519596 ZFRQ96KR1 1074 aaKnown RBP6.64□□□□□ -1.35
PABPC1-211ENST00000519596 NCKAP5LQ9HCH0 1330 aa6.64□□□□□ -1.35
PABPC1-211ENST00000519596 LAPTM4BQ86VI4 370 aa6.63□□□□□ -1.35
PABPC1-211ENST00000519596 PCDHGA10Q9Y5H3 936 aa6.63□□□□□ -1.35
PABPC1-211ENST00000519596 NKX1-1Q15270 411 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-211ENST00000519596 KIAA1468Q9P260 1216 aa6.62□□□□□ -1.35
PABPC1-211ENST00000519596 SEPT9Q9UHD8 586 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-211ENST00000519596 PDE4AP27815 886 aa6.6□□□□□ -1.35
PABPC1-211ENST00000519596 MAP3K9P80192 1104 aa6.59□□□□□ -1.35
PABPC1-211ENST00000519596 NRG2O14511 850 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-211ENST00000519596 TSR3Q9UJK0 312 aaKnown RBP6.58□□□□□ -1.36
PABPC1-211ENST00000519596 HPS5Q9UPZ3 1129 aa6.58□□□□□ -1.36
PABPC1-211ENST00000519596 TYW1BQ6NUM6 668 aa6.57□□□□□ -1.36
PABPC1-211ENST00000519596 PRKD2Q9BZL6 878 aa6.57□□□□□ -1.36
PABPC1-211ENST00000519596 EMILIN3Q9NT22 766 aa6.57□□□□□ -1.36
PABPC1-211ENST00000519596 ZNF787Q6DD87 383 aa6.56□□□□□ -1.36
PABPC1-211ENST00000519596 FBXW7Q969H0 707 aa6.56□□□□□ -1.36
PABPC1-211ENST00000519596 LARP6Q9BRS8 491 aaKnown RBP6.56□□□□□ -1.36
PABPC1-211ENST00000519596 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-211ENST00000519596 GTPBP6O43824 516 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-211ENST00000519596 ONECUT3O60422 494 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-211ENST00000519596 PHF14O94880 888 aa6.55□□□□□ -1.36
PABPC1-211ENST00000519596 FAM98CQ17RN3 349 aaKnown RBP6.55□□□□□ -1.36
PABPC1-211ENST00000519596 ZNF775Q96BV0 537 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-211ENST00000519596 LRCH3Q96II8 777 aa6.55□□□□□ -1.36
PABPC1-211ENST00000519596 TRIM6-TRIM34B2RNG4 842 aa6.54□□□□□ -1.36
PABPC1-211ENST00000519596 TJAP1Q5JTD0 557 aa6.54□□□□□ -1.36
PABPC1-211ENST00000519596 DDX27Q96GQ7 796 aaKnown RBP6.54□□□□□ -1.36
PABPC1-211ENST00000519596 C6orf132Q5T0Z8 1188 aa6.53□□□□□ -1.36
PABPC1-211ENST00000519596 MFSD10Q14728 455 aa6.52□□□□□ -1.37
PABPC1-211ENST00000519596 PPP1R18Q6NYC8 613 aa6.51□□□□□ -1.37
PABPC1-211ENST00000519596 V9GY48 417 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-211ENST00000519596 PPP4CP60510 307 aa6.49□□□□□ -1.37
PABPC1-211ENST00000519596 AMER1Q5JTC6 1135 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-211ENST00000519596 PDZRN3Q9UPQ7 1066 aa6.49□□□□□ -1.37
PABPC1-211ENST00000519596 BBXQ8WY36 941 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-211ENST00000519596 RBM33Q96EV2 1170 aaKnown RBP6.48□□□□□ -1.37
PABPC1-211ENST00000519596 MTRQ99707 1265 aa6.48□□□□□ -1.37
PABPC1-211ENST00000519596 TSKSQ9UJT2 592 aa6.48□□□□□ -1.37
PABPC1-211ENST00000519596 ZNF516Q92618 1163 aa6.47□□□□□ -1.37
PABPC1-211ENST00000519596 EPAS1Q99814 870 aa6.47□□□□□ -1.37
PABPC1-211ENST00000519596 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.47□□□□□ -1.37
PABPC1-211ENST00000519596 SAMD7Q7Z3H4 446 aa6.46□□□□□ -1.38
PABPC1-211ENST00000519596 IL21Q9HBE4 155 aa6.46□□□□□ -1.38
PABPC1-211ENST00000519596 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.46□□□□□ -1.38
PABPC1-211ENST00000519596 SMAPO00193 183 aa6.44□□□□□ -1.38
PABPC1-211ENST00000519596 NKX2-3Q8TAU0 364 aa6.44□□□□□ -1.38
PABPC1-211ENST00000519596 RTN4Q9NQC3 1192 aaKnown RBP6.44□□□□□ -1.38
PABPC1-211ENST00000519596 PACS2Q86VP3 889 aa6.43□□□□□ -1.38
PABPC1-211ENST00000519596 SPRYD3Q8NCJ5 442 aa6.43□□□□□ -1.38
PABPC1-211ENST00000519596 DDX12PQ92771 950 aa6.43□□□□□ -1.38
PABPC1-211ENST00000519596 C3orf80F5H4A9 247 aa6.42□□□□□ -1.38
PABPC1-211ENST00000519596 DPYSL4O14531 572 aa6.42□□□□□ -1.38
PABPC1-211ENST00000519596 TSR1Q2NL82 804 aaKnown RBP6.42□□□□□ -1.38
PABPC1-211ENST00000519596 POTECB2RU33 542 aa6.41□□□□□ -1.38
PABPC1-211ENST00000519596 TRIM67Q6ZTA4 783 aa6.41□□□□□ -1.38
PABPC1-211ENST00000519596 CADPS2Q86UW7 1296 aa6.41□□□□□ -1.38
PABPC1-211ENST00000519596 FAM198AQ9UFP1 575 aa6.41□□□□□ -1.38
PABPC1-211ENST00000519596 APLP1P51693 650 aa6.4□□□□□ -1.38
PABPC1-211ENST00000519596 EN1Q05925 392 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-211ENST00000519596 CAMK2BQ13554 666 aa6.39□□□□□ -1.39
PABPC1-211ENST00000519596 MAP3K7O43318 606 aa6.38□□□□□ -1.39
PABPC1-211ENST00000519596 MYT1Q01538 1121 aa6.38□□□□□ -1.39
PABPC1-211ENST00000519596 NBR1Q14596 966 aa6.38□□□□□ -1.39
PABPC1-211ENST00000519596 CDCA7LQ96GN5 454 aa6.38□□□□□ -1.39
PABPC1-211ENST00000519596 EMID1Q96A84 441 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-211ENST00000519596 CFAP44Q96MT7 982 aa6.37□□□□□ -1.39
PABPC1-211ENST00000519596 WDR70Q9NW82 654 aa6.37□□□□□ -1.39
PABPC1-211ENST00000519596 RNF40O75150 1001 aa6.36□□□□□ -1.39
PABPC1-211ENST00000519596 PRSS12P56730 875 aa6.36□□□□□ -1.39
PABPC1-211ENST00000519596 COPS2P61201 443 aa6.36□□□□□ -1.39
PABPC1-211ENST00000519596 PAXIP1Q6ZW49 1069 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-211ENST00000519596 TATDN2Q93075 761 aa6.36□□□□□ -1.39
PABPC1-211ENST00000519596 GGCXP38435 758 aa6.35□□□□□ -1.39
PABPC1-211ENST00000519596 PKDCCQ504Y2 493 aa6.35□□□□□ -1.39
PABPC1-211ENST00000519596 LCE2AQ5TA79 106 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-211ENST00000519596 PNMA3Q9UL41 463 aa6.35□□□□□ -1.39
PABPC1-211ENST00000519596 PRIM1P49642 420 aaKnown RBP6.34□□□□□ -1.39
PABPC1-211ENST00000519596 TMUB1Q9BVT8 246 aa6.34□□□□□ -1.39
PABPC1-211ENST00000519596 NBPF26B4DH59 902 aa6.33□□□□□ -1.4
PABPC1-211ENST00000519596 DGAT1O75907 488 aa6.33□□□□□ -1.4
PABPC1-211ENST00000519596 SLC19A1P41440 591 aa6.33□□□□□ -1.4
PABPC1-211ENST00000519596 TREML4Q6UXN2 200 aa6.33□□□□□ -1.4
PABPC1-211ENST00000519596 SPDYE16A6NNV3 312 aaPredicted RBP6.31□□□□□ -1.4
PABPC1-211ENST00000519596 RNF223E7ERA6 249 aa6.31□□□□□ -1.4
PABPC1-211ENST00000519596 ZPR1O75312 459 aa6.31□□□□□ -1.4
PABPC1-211ENST00000519596 E2F4Q16254 413 aa6.31□□□□□ -1.4
PABPC1-211ENST00000519596 NUDT18Q6ZVK8 323 aa6.31□□□□□ -1.4
PABPC1-211ENST00000519596 SPRYD7Q5W111 196 aa6.3□□□□□ -1.4
PABPC1-211ENST00000519596 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 HDGFP51858 240 aaKnown RBP6.29□□□□□ -1.4
PABPC1-211ENST00000519596 PRR20EP86478 221 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 PRR20CP86479 221 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 PRR20DP86480 221 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 PRR20BP86481 221 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 PRR20AP86496 221 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 PDIA6Q15084 440 aa6.29□□□□□ -1.4
PABPC1-211ENST00000519596 SWT1Q5T5J6 900 aaKnown RBP6.29□□□□□ -1.4
PABPC1-211ENST00000519596 CERKQ8TCT0 537 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms