RNA–Protein interactions for RNA: ENST00000519445.5

KCNQ3-202, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-202ENST00000519445 SAMD9LQ8IVG5 1584 aa31.62■■■□□ 2.65
KCNQ3-202ENST00000519445 SYCP2Q9BX26 1530 aa31.6■■■□□ 2.65
KCNQ3-202ENST00000519445 ARHGAP5Q13017 1502 aa31.6■■■□□ 2.65
KCNQ3-202ENST00000519445 TTC37Q6PGP7 1564 aa31.58■■■□□ 2.65
KCNQ3-202ENST00000519445 CDC42BPBQ9Y5S2 1711 aa31.58■■■□□ 2.65
KCNQ3-202ENST00000519445 BCORL1Q5H9F3 1711 aa31.56■■■□□ 2.64
KCNQ3-202ENST00000519445 NBPF1Q3BBV0 1214 aa31.56■■■□□ 2.64
KCNQ3-202ENST00000519445 CCDC141Q6ZP82 1450 aa31.54■■■□□ 2.64
KCNQ3-202ENST00000519445 EIF5BO60841 1220 aaKnown RBP31.52■■■□□ 2.64
KCNQ3-202ENST00000519445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.51■■■□□ 2.63
KCNQ3-202ENST00000519445 PPP4R2Q9NY27 417 aa31.51■■■□□ 2.63
KCNQ3-202ENST00000519445 SHANK2Q9UPX8 1470 aa31.49■■■□□ 2.63
KCNQ3-202ENST00000519445 PLEKHH2Q8IVE3 1493 aa31.49■■■□□ 2.63
KCNQ3-202ENST00000519445 AFAP1Q8N556 730 aa31.48■■■□□ 2.63
KCNQ3-202ENST00000519445 DHX29Q7Z478 1369 aaKnown RBP31.45■■■□□ 2.63
KCNQ3-202ENST00000519445 ARHGEF12Q9NZN5 1544 aa31.45■■■□□ 2.62
KCNQ3-202ENST00000519445 FAM135AQ9P2D6 1515 aa31.44■■■□□ 2.62
KCNQ3-202ENST00000519445 ROCK2O75116 1388 aaKnown RBP31.44■■■□□ 2.62
KCNQ3-202ENST00000519445 PREX2Q70Z35 1606 aa31.42■■■□□ 2.62
KCNQ3-202ENST00000519445 CCDC144AA2RUR9 1427 aa31.38■■■□□ 2.61
KCNQ3-202ENST00000519445 KDM5CP41229 1560 aa31.38■■■□□ 2.61
KCNQ3-202ENST00000519445 ARHGEF5Q12774 1597 aa31.37■■■□□ 2.61
KCNQ3-202ENST00000519445 ABCC2Q92887 1545 aa31.36■■■□□ 2.61
KCNQ3-202ENST00000519445 PLA2R1Q13018 1463 aa31.35■■■□□ 2.61
KCNQ3-202ENST00000519445 ZBTB47Q9UFB7 747 aaPredicted RBP31.34■■■□□ 2.61
KCNQ3-202ENST00000519445 TRAPPC8Q9Y2L5 1435 aa31.34■■■□□ 2.61
KCNQ3-202ENST00000519445 RSPH4AQ5TD94 716 aa31.32■■■□□ 2.6
KCNQ3-202ENST00000519445 EFCAB2Q5VUJ9 269 aa31.32■■■□□ 2.6
KCNQ3-202ENST00000519445 RALGAPBQ86X10 1494 aa31.32■■■□□ 2.6
KCNQ3-202ENST00000519445 ANP32AP39687 249 aaKnown RBP31.31■■■□□ 2.6
KCNQ3-202ENST00000519445 IPO9Q96P70 1041 aaKnown RBP31.3■■■□□ 2.6
KCNQ3-202ENST00000519445 SHROOM2Q13796 1616 aa31.3■■■□□ 2.6
KCNQ3-202ENST00000519445 TMC1Q8TDI8 760 aa31.3■■■□□ 2.6
KCNQ3-202ENST00000519445 UHRF1BP1Q6BDS2 1440 aa31.29■■■□□ 2.6
KCNQ3-202ENST00000519445 KDM5DQ9BY66 1539 aa31.26■■■□□ 2.6
KCNQ3-202ENST00000519445 ZBED9Q6R2W3 1325 aa31.25■■■□□ 2.59
KCNQ3-202ENST00000519445 CC2D1BQ5T0F9 858 aaKnown RBP31.23■■■□□ 2.59
KCNQ3-202ENST00000519445 LAS1LQ9Y4W2 734 aaKnown RBP31.23■■■□□ 2.59
KCNQ3-202ENST00000519445 ZCCHC11Q5TAX3 1644 aaKnown RBP31.22■■■□□ 2.59
KCNQ3-202ENST00000519445 SPAG9O60271 1321 aaKnown RBP31.22■■■□□ 2.59
KCNQ3-202ENST00000519445 PLCH2O75038 1416 aa31.21■■■□□ 2.59
KCNQ3-202ENST00000519445 MYO5CQ9NQX4 1742 aa31.21■■■□□ 2.59
KCNQ3-202ENST00000519445 PRAG1Q86YV5 1406 aa31.2■■■□□ 2.59
KCNQ3-202ENST00000519445 A2MP01023 1474 aa31.2■■■□□ 2.59
KCNQ3-202ENST00000519445 BRPF3Q9ULD4 1205 aa31.2■■■□□ 2.58
KCNQ3-202ENST00000519445 PNISRQ8TF01 805 aaKnown RBP31.18■■■□□ 2.58
KCNQ3-202ENST00000519445 POLR1AO95602 1720 aaPredicted RBP31.18■■■□□ 2.58
KCNQ3-202ENST00000519445 NEFMP07197 916 aa31.16■■■□□ 2.58
KCNQ3-202ENST00000519445 DISP3Q9P2K9 1392 aa31.15■■■□□ 2.58
KCNQ3-202ENST00000519445 NPM2Q86SE8 214 aaKnown RBP31.15■■■□□ 2.58
KCNQ3-202ENST00000519445 KIF3BO15066 747 aa31.12■■■□□ 2.57
KCNQ3-202ENST00000519445 SENP3Q9H4L4 574 aaPredicted RBP31.1■■■□□ 2.57
KCNQ3-202ENST00000519445 CLASP1Q7Z460 1538 aa31.09■■■□□ 2.57
KCNQ3-202ENST00000519445 PKNOX2Q96KN3 472 aa31.09■■■□□ 2.57
KCNQ3-202ENST00000519445 TESK2Q96S53 571 aa31.09■■■□□ 2.57
KCNQ3-202ENST00000519445 PANK3Q9H999 370 aa31.08■■■□□ 2.57
KCNQ3-202ENST00000519445 SCAPERQ9BY12 1400 aa31.05■■■□□ 2.56
KCNQ3-202ENST00000519445 DUOX2Q9NRD8 1548 aa31.04■■■□□ 2.56
KCNQ3-202ENST00000519445 ARID4BQ4LE39 1312 aaPredicted RBP31.04■■■□□ 2.56
KCNQ3-202ENST00000519445 UNC13BO14795 1591 aa31.04■■■□□ 2.56
KCNQ3-202ENST00000519445 ABCC1P33527 1531 aa31.02■■■□□ 2.56
KCNQ3-202ENST00000519445 MAST1Q9Y2H9 1570 aa31.01■■■□□ 2.56
KCNQ3-202ENST00000519445 TRPM1Q7Z4N2 1603 aa31.01■■■□□ 2.55
KCNQ3-202ENST00000519445 MYBBP1AQ9BQG0 1328 aaKnown RBP31.01■■■□□ 2.55
KCNQ3-202ENST00000519445 PER1O15534 1290 aaPredicted RBP31■■■□□ 2.55
KCNQ3-202ENST00000519445 NUDCQ9Y266 331 aa30.97■■■□□ 2.55
KCNQ3-202ENST00000519445 PLXNC1O60486 1568 aa30.97■■■□□ 2.55
KCNQ3-202ENST00000519445 IQGAP3Q86VI3 1631 aa30.97■■■□□ 2.55
KCNQ3-202ENST00000519445 ERBINQ96RT1 1412 aa30.96■■■□□ 2.55
KCNQ3-202ENST00000519445 CHGAP10645 457 aaKnown RBP30.95■■■□□ 2.54
KCNQ3-202ENST00000519445 FANCAO15360 1455 aa30.95■■■□□ 2.54
KCNQ3-202ENST00000519445 KTN1Q86UP2 1357 aaKnown RBP30.92■■■□□ 2.54
KCNQ3-202ENST00000519445 RALBP1Q15311 655 aa30.92■■■□□ 2.54
KCNQ3-202ENST00000519445 CDCA7LQ96GN5 454 aa30.92■■■□□ 2.54
KCNQ3-202ENST00000519445 TMF1P82094 1093 aa30.92■■■□□ 2.54
KCNQ3-202ENST00000519445 UHRF1BP1LA0JNW5 1464 aa30.91■■■□□ 2.54
KCNQ3-202ENST00000519445 WDR7Q9Y4E6 1490 aa30.9■■■□□ 2.54
KCNQ3-202ENST00000519445 WASHC2CQ9Y4E1 1318 aa30.9■■■□□ 2.54
KCNQ3-202ENST00000519445 UGGT1Q9NYU2 1555 aa30.89■■■□□ 2.54
KCNQ3-202ENST00000519445 CFAP70Q5T0N1 1121 aa30.88■■■□□ 2.53
KCNQ3-202ENST00000519445 GPRASP1Q5JY77 1395 aa30.87■■■□□ 2.53
KCNQ3-202ENST00000519445 NLRP13Q86W25 1043 aa30.87■■■□□ 2.53
KCNQ3-202ENST00000519445 GGT6Q6P531 493 aa30.87■■■□□ 2.53
KCNQ3-202ENST00000519445 ATP10AO60312 1499 aa30.86■■■□□ 2.53
KCNQ3-202ENST00000519445 ASXL2Q76L83 1435 aa30.86■■■□□ 2.53
KCNQ3-202ENST00000519445 ZFYVE16Q7Z3T8 1539 aa30.86■■■□□ 2.53
KCNQ3-202ENST00000519445 SMG6Q86US8 1419 aaKnown RBP30.86■■■□□ 2.53
KCNQ3-202ENST00000519445 ADGRL1O94910 1474 aa30.85■■■□□ 2.53
KCNQ3-202ENST00000519445 E9PCH4 1651 aa30.85■■■□□ 2.53
KCNQ3-202ENST00000519445 NUTM2DQ5VT03 806 aaPredicted RBP30.85■■■□□ 2.53
KCNQ3-202ENST00000519445 BRD4O60885 1362 aaPredicted RBP30.84■■■□□ 2.53
KCNQ3-202ENST00000519445 MAGI2Q86UL8 1455 aa30.84■■■□□ 2.53
KCNQ3-202ENST00000519445 COL17A1Q9UMD9 1497 aaPredicted RBP30.83■■■□□ 2.53
KCNQ3-202ENST00000519445 PARD3Q8TEW0 1356 aa30.81■■■□□ 2.52
KCNQ3-202ENST00000519445 ADGRF5Q8IZF2 1346 aa30.81■■■□□ 2.52
KCNQ3-202ENST00000519445 LRPPRCP42704 1394 aaKnown RBP30.8■■■□□ 2.52
KCNQ3-202ENST00000519445 PRDM15P57071 1507 aaPredicted RBP30.8■■■□□ 2.52
KCNQ3-202ENST00000519445 CFAP65Q6ZU64 1925 aaKnown RBP30.78■■■□□ 2.52
KCNQ3-202ENST00000519445 NPM1P06748 294 aaKnown RBP eCLIP30.78■■■□□ 2.52
KCNQ3-202ENST00000519445 USP35Q9P2H5 1018 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms