RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 FAM135AQ9P2D6 1515 aa33.12■■■□□ 2.89
ARFGEF1-206ENST00000519436 FBXO31Q5XUX0 539 aaPredicted RBP33.11■■■□□ 2.89
ARFGEF1-206ENST00000519436 NCOA1Q15788 1441 aa33.1■■■□□ 2.89
ARFGEF1-206ENST00000519436 KDM5DQ9BY66 1539 aa33.09■■■□□ 2.89
ARFGEF1-206ENST00000519436 PTPRTO14522 1441 aa33.08■■■□□ 2.89
ARFGEF1-206ENST00000519436 SHANK2Q9UPX8 1470 aa33.07■■■□□ 2.88
ARFGEF1-206ENST00000519436 DAPK1P53355 1430 aa33.06■■■□□ 2.88
ARFGEF1-206ENST00000519436 PZPP20742 1482 aa33.05■■■□□ 2.88
ARFGEF1-206ENST00000519436 CERKQ8TCT0 537 aa33.04■■■□□ 2.88
ARFGEF1-206ENST00000519436 RRP7BPQ9NSQ0 103 aa33.04■■■□□ 2.88
ARFGEF1-206ENST00000519436 DUOX2Q9NRD8 1548 aa33.03■■■□□ 2.88
ARFGEF1-206ENST00000519436 KIF15Q9NS87 1388 aa33.03■■■□□ 2.88
ARFGEF1-206ENST00000519436 RNF17Q9BXT8 1623 aaKnown RBP33.02■■■□□ 2.88
ARFGEF1-206ENST00000519436 CAMSAP1Q5T5Y3 1602 aa33.02■■■□□ 2.88
ARFGEF1-206ENST00000519436 MYO3AQ8NEV4 1616 aa33.01■■■□□ 2.87
ARFGEF1-206ENST00000519436 TNRQ92752 1358 aa33■■■□□ 2.87
ARFGEF1-206ENST00000519436 CEP170BQ9Y4F5 1589 aaPredicted RBP33■■■□□ 2.87
ARFGEF1-206ENST00000519436 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
ARFGEF1-206ENST00000519436 NCKAP5LQ9HCH0 1330 aa32.99■■■□□ 2.87
ARFGEF1-206ENST00000519436 EIF2AK4Q9P2K8 1649 aaKnown RBP32.99■■■□□ 2.87
ARFGEF1-206ENST00000519436 ZNF142P52746 1687 aaPredicted RBP32.97■■■□□ 2.87
ARFGEF1-206ENST00000519436 ABCC3O15438 1527 aa32.97■■■□□ 2.87
ARFGEF1-206ENST00000519436 A2ML1A8K2U0 1454 aa32.97■■■□□ 2.87
ARFGEF1-206ENST00000519436 MROH1Q8NDA8 1641 aa32.96■■■□□ 2.87
ARFGEF1-206ENST00000519436 CHIC2Q9UKJ5 165 aa32.96■■■□□ 2.87
ARFGEF1-206ENST00000519436 PLA2R1Q13018 1463 aa32.96■■■□□ 2.87
ARFGEF1-206ENST00000519436 CROCC2H7BZ55 1655 aa32.95■■■□□ 2.87
ARFGEF1-206ENST00000519436 ERBINQ96RT1 1412 aa32.94■■■□□ 2.86
ARFGEF1-206ENST00000519436 PKD2Q13563 968 aa32.94■■■□□ 2.86
ARFGEF1-206ENST00000519436 ANKRD30AQ9BXX3 1397 aa32.91■■■□□ 2.86
ARFGEF1-206ENST00000519436 FAM50AQ14320 339 aaKnown RBP32.9■■■□□ 2.86
ARFGEF1-206ENST00000519436 NLRP1Q9C000 1473 aa32.85■■■□□ 2.85
ARFGEF1-206ENST00000519436 ZC3H13Q5T200 1668 aaKnown RBP32.85■■■□□ 2.85
ARFGEF1-206ENST00000519436 ADGRL2O95490 1459 aa32.84■■■□□ 2.85
ARFGEF1-206ENST00000519436 PRDM15P57071 1507 aaPredicted RBP32.82■■■□□ 2.85
ARFGEF1-206ENST00000519436 LTBP4Q8N2S1 1624 aa32.82■■■□□ 2.84
ARFGEF1-206ENST00000519436 SPATA31D1Q6ZQQ2 1576 aa32.82■■■□□ 2.84
ARFGEF1-206ENST00000519436 ERVK-7P63135 1459 aa32.81■■■□□ 2.84
ARFGEF1-206ENST00000519436 THEMISQ8N1K5 641 aaPredicted RBP32.81■■■□□ 2.84
ARFGEF1-206ENST00000519436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.81■■■□□ 2.841e-6■■□□□ 12.7
ARFGEF1-206ENST00000519436 ARHGAP31Q2M1Z3 1444 aa32.8■■■□□ 2.84
ARFGEF1-206ENST00000519436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.77■■■□□ 2.841e-10■■■□□ 16.5
ARFGEF1-206ENST00000519436 DEPDC5O75140 1603 aa32.76■■■□□ 2.83
ARFGEF1-206ENST00000519436 PPARGC1BQ86YN6 1023 aaKnown RBP32.75■■■□□ 2.83
ARFGEF1-206ENST00000519436 CEP152O94986 1710 aa32.74■■■□□ 2.83
ARFGEF1-206ENST00000519436 UGGT1Q9NYU2 1555 aa32.74■■■□□ 2.83
ARFGEF1-206ENST00000519436 ZNF335Q9H4Z2 1342 aaPredicted RBP32.74■■■□□ 2.83
ARFGEF1-206ENST00000519436 ANKLE2Q86XL3 938 aa32.73■■■□□ 2.83
ARFGEF1-206ENST00000519436 KANK1Q14678 1352 aa32.72■■■□□ 2.83
ARFGEF1-206ENST00000519436 VWDEQ8N2E2 1590 aa32.7■■■□□ 2.83
ARFGEF1-206ENST00000519436 ANKRD50Q9ULJ7 1429 aa32.69■■■□□ 2.82
ARFGEF1-206ENST00000519436 LMTK2Q8IWU2 1503 aa32.69■■■□□ 2.82
ARFGEF1-206ENST00000519436 NEURL4Q96JN8 1562 aa32.67■■■□□ 2.82
ARFGEF1-206ENST00000519436 MED14O60244 1454 aa32.63■■■□□ 2.81
ARFGEF1-206ENST00000519436 ROCK1Q13464 1354 aa32.63■■■□□ 2.81
ARFGEF1-206ENST00000519436 IQSEC2Q5JU85 1478 aa32.62■■■□□ 2.81
ARFGEF1-206ENST00000519436 CFAP65Q6ZU64 1925 aaKnown RBP32.61■■■□□ 2.81
ARFGEF1-206ENST00000519436 NPHP4O75161 1426 aaPredicted RBP32.58■■■□□ 2.81
ARFGEF1-206ENST00000519436 POLR1AO95602 1720 aaPredicted RBP32.57■■■□□ 2.8
ARFGEF1-206ENST00000519436 IDI1Q13907 227 aa32.56■■■□□ 2.8
ARFGEF1-206ENST00000519436 NOS1P29475 1434 aa32.55■■■□□ 2.8
ARFGEF1-206ENST00000519436 LTKP29376 864 aa32.53■■■□□ 2.8
ARFGEF1-206ENST00000519436 UBR1Q8IWV7 1749 aa32.53■■■□□ 2.8
ARFGEF1-206ENST00000519436 EFCAB6Q5THR3 1501 aa32.52■■■□□ 2.8
ARFGEF1-206ENST00000519436 ITGAEP38570 1179 aa32.52■■■□□ 2.8
ARFGEF1-206ENST00000519436 ARHGAP23Q9P227 1491 aa32.52■■■□□ 2.8
ARFGEF1-206ENST00000519436 SLIT1O75093 1534 aa32.49■■■□□ 2.79
ARFGEF1-206ENST00000519436 TXNDC2Q86VQ3 553 aa32.48■■■□□ 2.79
ARFGEF1-206ENST00000519436 SYNMO15061 1565 aa32.46■■■□□ 2.79
ARFGEF1-206ENST00000519436 RRBP1Q9P2E9 1410 aaKnown RBP32.46■■■□□ 2.79
ARFGEF1-206ENST00000519436 SLC52A1Q9NWF4 448 aa32.46■■■□□ 2.79
ARFGEF1-206ENST00000519436 RPRD2Q5VT52 1461 aaKnown RBP32.46■■■□□ 2.79
ARFGEF1-206ENST00000519436 SCAF11Q99590 1463 aaKnown RBP32.45■■■□□ 2.79
ARFGEF1-206ENST00000519436 TMEM2Q9UHN6 1383 aa32.45■■■□□ 2.78
ARFGEF1-206ENST00000519436 PIK3C2BO00750 1634 aa32.44■■■□□ 2.78
ARFGEF1-206ENST00000519436 CPS1P31327 1500 aa32.42■■■□□ 2.78
ARFGEF1-206ENST00000519436 UNC13BO14795 1591 aa32.42■■■□□ 2.78
ARFGEF1-206ENST00000519436 STAG3Q9UJ98 1225 aa32.42■■■□□ 2.78
ARFGEF1-206ENST00000519436 IQGAP1P46940 1657 aa32.41■■■□□ 2.78
ARFGEF1-206ENST00000519436 EID1Q9Y6B2 187 aa32.41■■■□□ 2.78
ARFGEF1-206ENST00000519436 UBAP1LF5GYI3 381 aa32.4■■■□□ 2.78
ARFGEF1-206ENST00000519436 TET3O43151 1660 aa32.38■■■□□ 2.77
ARFGEF1-206ENST00000519436 NUP155O75694 1391 aa32.36■■■□□ 2.77
ARFGEF1-206ENST00000519436 KDM5AP29375 1690 aaKnown RBP32.36■■■□□ 2.77
ARFGEF1-206ENST00000519436 ADGRB3O60242 1522 aa32.3■■■□□ 2.76
ARFGEF1-206ENST00000519436 IQGAP3Q86VI3 1631 aa32.29■■■□□ 2.76
ARFGEF1-206ENST00000519436 GCC2Q8IWJ2 1684 aa32.27■■■□□ 2.76
ARFGEF1-206ENST00000519436 LRRC7Q96NW7 1537 aa32.26■■■□□ 2.75
ARFGEF1-206ENST00000519436 STRCP1A6NGW2 1772 aa32.25■■■□□ 2.75
ARFGEF1-206ENST00000519436 E9PCH4 1651 aa32.24■■■□□ 2.75
ARFGEF1-206ENST00000519436 TOM1O60784 492 aa32.24■■■□□ 2.75
ARFGEF1-206ENST00000519436 NAIPQ13075 1403 aa32.24■■■□□ 2.75
ARFGEF1-206ENST00000519436 ZFYVE9O95405 1425 aa32.21■■■□□ 2.75
ARFGEF1-206ENST00000519436 SLC26A8Q96RN1 970 aa32.19■■■□□ 2.74
ARFGEF1-206ENST00000519436 TMEM131LA2VDJ0 1609 aa32.18■■■□□ 2.74
ARFGEF1-206ENST00000519436 RIMS2Q9UQ26 1411 aa32.16■■■□□ 2.74
ARFGEF1-206ENST00000519436 KCNA6P17658 529 aa32.15■■■□□ 2.74
ARFGEF1-206ENST00000519436 HDGFP51858 240 aaKnown RBP32.15■■■□□ 2.74
ARFGEF1-206ENST00000519436 CHGAP10645 457 aaKnown RBP32.14■■■□□ 2.74
ARFGEF1-206ENST00000519436 PIP4K2BP78356 416 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms