RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TRAK2O60296 914 aa17.38■□□□□ 0.37
PABPC1-208ENST00000519004 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
PABPC1-208ENST00000519004 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-208ENST00000519004 SMAP1Q8IYB5 467 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-208ENST00000519004 TRIM44Q96DX7 344 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-208ENST00000519004 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
PABPC1-208ENST00000519004 MAP7D2Q96T17 732 aa17.36■□□□□ 0.37
PABPC1-208ENST00000519004 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
PABPC1-208ENST00000519004 ISY1Q9ULR0 285 aaKnown RBP17.36■□□□□ 0.37
PABPC1-208ENST00000519004 E9PCH4 1651 aa17.35■□□□□ 0.37
PABPC1-208ENST00000519004 TCOF1Q13428 1488 aaKnown RBP17.35■□□□□ 0.37
PABPC1-208ENST00000519004 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
PABPC1-208ENST00000519004 INSRP06213 1382 aa17.34■□□□□ 0.37
PABPC1-208ENST00000519004 LRRIQ1Q96JM4 1722 aa17.34■□□□□ 0.37
PABPC1-208ENST00000519004 KIF14Q15058 1648 aa17.33■□□□□ 0.37
PABPC1-208ENST00000519004 CFTRP13569 1480 aa17.33■□□□□ 0.37
PABPC1-208ENST00000519004 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.37
PABPC1-208ENST00000519004 ZMYM4Q5VZL5 1548 aa17.33■□□□□ 0.37
PABPC1-208ENST00000519004 OFD1O75665 1012 aa17.33■□□□□ 0.36
PABPC1-208ENST00000519004 TERF1P54274 439 aa17.33■□□□□ 0.36
PABPC1-208ENST00000519004 PARD3Q8TEW0 1356 aa17.33■□□□□ 0.36
PABPC1-208ENST00000519004 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
PABPC1-208ENST00000519004 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
PABPC1-208ENST00000519004 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
PABPC1-208ENST00000519004 EHBP1L1Q8N3D4 1523 aa17.29■□□□□ 0.36
PABPC1-208ENST00000519004 FAM13BQ9NYF5 915 aa17.29■□□□□ 0.36
PABPC1-208ENST00000519004 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
PABPC1-208ENST00000519004 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
PABPC1-208ENST00000519004 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
PABPC1-208ENST00000519004 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
PABPC1-208ENST00000519004 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
PABPC1-208ENST00000519004 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.36
PABPC1-208ENST00000519004 CHMP5Q9NZZ3 219 aa17.26■□□□□ 0.35
PABPC1-208ENST00000519004 IGHDP01880 384 aa17.26■□□□□ 0.35
PABPC1-208ENST00000519004 ZSCAN30Q86W11 494 aa17.26■□□□□ 0.35
PABPC1-208ENST00000519004 SPRYD3Q8NCJ5 442 aa17.26■□□□□ 0.35
PABPC1-208ENST00000519004 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
PABPC1-208ENST00000519004 DDX11L8A8MPP1 907 aa17.25■□□□□ 0.35
PABPC1-208ENST00000519004 UTP14CQ5TAP6 766 aaKnown RBP17.25■□□□□ 0.35
PABPC1-208ENST00000519004 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
PABPC1-208ENST00000519004 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-208ENST00000519004 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-208ENST00000519004 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
PABPC1-208ENST00000519004 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
PABPC1-208ENST00000519004 BBXQ8WY36 941 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-208ENST00000519004 PDIA4P13667 645 aaKnown RBP17.23■□□□□ 0.35
PABPC1-208ENST00000519004 PPP1R9BQ96SB3 815 aa17.23■□□□□ 0.35
PABPC1-208ENST00000519004 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
PABPC1-208ENST00000519004 DMTNQ08495 405 aa17.22■□□□□ 0.35
PABPC1-208ENST00000519004 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
PABPC1-208ENST00000519004 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-208ENST00000519004 CCDC173Q0VFZ6 552 aa17.22■□□□□ 0.35
PABPC1-208ENST00000519004 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
PABPC1-208ENST00000519004 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
PABPC1-208ENST00000519004 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
PABPC1-208ENST00000519004 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
PABPC1-208ENST00000519004 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
PABPC1-208ENST00000519004 MTERF4Q7Z6M4 381 aaKnown RBP17.2■□□□□ 0.34
PABPC1-208ENST00000519004 UPF2Q9HAU5 1272 aaKnown RBP17.2■□□□□ 0.34
PABPC1-208ENST00000519004 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
PABPC1-208ENST00000519004 PLEKHH1Q9ULM0 1364 aa17.19■□□□□ 0.34
PABPC1-208ENST00000519004 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
PABPC1-208ENST00000519004 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
PABPC1-208ENST00000519004 UQCRHLA0A096LP55 91 aa17.18■□□□□ 0.34
PABPC1-208ENST00000519004 UQCRHP07919 91 aa17.18■□□□□ 0.34
PABPC1-208ENST00000519004 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
PABPC1-208ENST00000519004 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
PABPC1-208ENST00000519004 ARID3AQ99856 593 aa17.17■□□□□ 0.34
PABPC1-208ENST00000519004 RTEL1-TNFRSF6BF6WH68 1400 aa17.16■□□□□ 0.34
PABPC1-208ENST00000519004 ZSCAN20P17040 1043 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-208ENST00000519004 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
PABPC1-208ENST00000519004 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
PABPC1-208ENST00000519004 PER1O15534 1290 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-208ENST00000519004 PZPP20742 1482 aa17.15■□□□□ 0.34
PABPC1-208ENST00000519004 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
PABPC1-208ENST00000519004 DYNC1I1O14576 645 aa17.14■□□□□ 0.33
PABPC1-208ENST00000519004 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
PABPC1-208ENST00000519004 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
PABPC1-208ENST00000519004 ZMYM3Q14202 1370 aa17.13■□□□□ 0.33
PABPC1-208ENST00000519004 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
PABPC1-208ENST00000519004 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
PABPC1-208ENST00000519004 DDIT3P35638 169 aa17.12■□□□□ 0.33
PABPC1-208ENST00000519004 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-208ENST00000519004 CCDC94Q9BW85 323 aaPredicted RBP17.12■□□□□ 0.33
PABPC1-208ENST00000519004 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
PABPC1-208ENST00000519004 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
PABPC1-208ENST00000519004 GOLGA2Q08379 1002 aa17.11■□□□□ 0.33
PABPC1-208ENST00000519004 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
PABPC1-208ENST00000519004 CCDC144AA2RUR9 1427 aa17.1■□□□□ 0.33
PABPC1-208ENST00000519004 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
PABPC1-208ENST00000519004 PPP4R3BQ5MIZ7 849 aa17.1■□□□□ 0.33
PABPC1-208ENST00000519004 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
PABPC1-208ENST00000519004 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
PABPC1-208ENST00000519004 BCAR3O75815 825 aa17.09■□□□□ 0.33
PABPC1-208ENST00000519004 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-208ENST00000519004 CC2D1BQ5T0F9 858 aaKnown RBP17.09■□□□□ 0.33
PABPC1-208ENST00000519004 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
PABPC1-208ENST00000519004 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
PABPC1-208ENST00000519004 HS1BP3Q53T59 392 aa17.08■□□□□ 0.33
PABPC1-208ENST00000519004 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms