RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 DEPDC5O75140 1603 aa31.54■■■□□ 2.64
TOP1MT-206ENST00000518951 MADDQ8WXG6 1647 aa31.5■■■□□ 2.63
TOP1MT-206ENST00000518951 KDM4FA0A1W2PPD8 638 aa31.5■■■□□ 2.63
TOP1MT-206ENST00000518951 SETD5Q9C0A6 1442 aa31.49■■■□□ 2.63
TOP1MT-206ENST00000518951 FER1L4A9Z1Z3 1794 aa31.49■■■□□ 2.63
TOP1MT-206ENST00000518951 UNC13BO14795 1591 aa31.47■■■□□ 2.63
TOP1MT-206ENST00000518951 PRDM15P57071 1507 aaPredicted RBP31.47■■■□□ 2.63
TOP1MT-206ENST00000518951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.46■■■□□ 2.631e-7■■■■□ 21.9
TOP1MT-206ENST00000518951 CLTCQ00610 1675 aaKnown RBP31.44■■■□□ 2.62
TOP1MT-206ENST00000518951 RIMS1Q86UR5 1692 aaKnown RBP31.43■■■□□ 2.62
TOP1MT-206ENST00000518951 CEP152O94986 1710 aa31.42■■■□□ 2.62
TOP1MT-206ENST00000518951 PPP6R1Q9UPN7 881 aa31.41■■■□□ 2.62
TOP1MT-206ENST00000518951 RAB3GAP2Q9H2M9 1393 aa31.41■■■□□ 2.62
TOP1MT-206ENST00000518951 VWDEQ8N2E2 1590 aa31.41■■■□□ 2.62
TOP1MT-206ENST00000518951 KDM5DQ9BY66 1539 aa31.39■■■□□ 2.62
TOP1MT-206ENST00000518951 WASHC2CQ9Y4E1 1318 aa31.38■■■□□ 2.61
TOP1MT-206ENST00000518951 ABCC3O15438 1527 aa31.38■■■□□ 2.61
TOP1MT-206ENST00000518951 PCGF6Q9BYE7 350 aa31.36■■■□□ 2.61
TOP1MT-206ENST00000518951 ZC3H13Q5T200 1668 aaKnown RBP31.36■■■□□ 2.61
TOP1MT-206ENST00000518951 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
TOP1MT-206ENST00000518951 FAM135AQ9P2D6 1515 aa31.35■■■□□ 2.61
TOP1MT-206ENST00000518951 NUP155O75694 1391 aa31.35■■■□□ 2.61
TOP1MT-206ENST00000518951 KANK1Q14678 1352 aa31.35■■■□□ 2.61
TOP1MT-206ENST00000518951 IQGAP3Q86VI3 1631 aa31.34■■■□□ 2.61
TOP1MT-206ENST00000518951 MROH2AA6NES4 1674 aa31.33■■■□□ 2.61
TOP1MT-206ENST00000518951 CNTLNQ9NXG0 1405 aa31.33■■■□□ 2.61
TOP1MT-206ENST00000518951 TRIM52Q96A61 297 aa31.31■■■□□ 2.6
TOP1MT-206ENST00000518951 CAMSAP1Q5T5Y3 1602 aa31.31■■■□□ 2.6
TOP1MT-206ENST00000518951 C3P01024 1663 aa31.31■■■□□ 2.6
TOP1MT-206ENST00000518951 PTPRMP28827 1452 aa31.3■■■□□ 2.6
TOP1MT-206ENST00000518951 LMTK2Q8IWU2 1503 aa31.3■■■□□ 2.6
TOP1MT-206ENST00000518951 ZMYM3Q14202 1370 aa31.29■■■□□ 2.6
TOP1MT-206ENST00000518951 CEBPAP49715 358 aaPredicted RBP31.27■■■□□ 2.6
TOP1MT-206ENST00000518951 HRCP23327 699 aa31.27■■■□□ 2.6
TOP1MT-206ENST00000518951 PZPP20742 1482 aa31.26■■■□□ 2.59
TOP1MT-206ENST00000518951 TET3O43151 1660 aa31.25■■■□□ 2.59
TOP1MT-206ENST00000518951 CFAP65Q6ZU64 1925 aaKnown RBP31.24■■■□□ 2.59
TOP1MT-206ENST00000518951 PLPPR3Q6T4P5 718 aa31.24■■■□□ 2.59
TOP1MT-206ENST00000518951 EFCAB6Q5THR3 1501 aa31.22■■■□□ 2.59
TOP1MT-206ENST00000518951 E9PCH4 1651 aa31.2■■■□□ 2.59
TOP1MT-206ENST00000518951 NPATQ14207 1427 aa31.18■■■□□ 2.58
TOP1MT-206ENST00000518951 ARHGAP31Q2M1Z3 1444 aa31.18■■■□□ 2.58
TOP1MT-206ENST00000518951 FBXO31Q5XUX0 539 aaPredicted RBP31.17■■■□□ 2.58
TOP1MT-206ENST00000518951 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
TOP1MT-206ENST00000518951 SLC4A1APQ9BWU0 796 aaKnown RBP31.15■■■□□ 2.58
TOP1MT-206ENST00000518951 MPHOSPH9Q99550 1183 aa31.14■■■□□ 2.58
TOP1MT-206ENST00000518951 PREX1Q8TCU6 1659 aa31.13■■■□□ 2.57
TOP1MT-206ENST00000518951 PKD2Q13563 968 aa31.1■■■□□ 2.57
TOP1MT-206ENST00000518951 ERVK-7P63135 1459 aa31.09■■■□□ 2.57
TOP1MT-206ENST00000518951 RPRD2Q5VT52 1461 aaKnown RBP31.09■■■□□ 2.57
TOP1MT-206ENST00000518951 SPATA31D1Q6ZQQ2 1576 aa31.08■■■□□ 2.57
TOP1MT-206ENST00000518951 FOXD1Q16676 465 aa31.06■■■□□ 2.56
TOP1MT-206ENST00000518951 SETD1BQ9UPS6 1966 aaKnown RBP31.05■■■□□ 2.56
TOP1MT-206ENST00000518951 NOS1P29475 1434 aa31.04■■■□□ 2.56
TOP1MT-206ENST00000518951 SYNMO15061 1565 aa31.02■■■□□ 2.56
TOP1MT-206ENST00000518951 SPHKAPQ2M3C7 1700 aa31.01■■■□□ 2.56
TOP1MT-206ENST00000518951 TNRQ92752 1358 aa31■■■□□ 2.55
TOP1MT-206ENST00000518951 PTPRTO14522 1441 aa30.98■■■□□ 2.55
TOP1MT-206ENST00000518951 PLA2R1Q13018 1463 aa30.97■■■□□ 2.55
TOP1MT-206ENST00000518951 MYO3AQ8NEV4 1616 aa30.95■■■□□ 2.55
TOP1MT-206ENST00000518951 UGGT1Q9NYU2 1555 aa30.94■■■□□ 2.54
TOP1MT-206ENST00000518951 DHX57Q6P158 1386 aaKnown RBP30.93■■■□□ 2.54
TOP1MT-206ENST00000518951 TRPM2O94759 1503 aa30.91■■■□□ 2.54
TOP1MT-206ENST00000518951 PIK3C2BO00750 1634 aa30.91■■■□□ 2.54
TOP1MT-206ENST00000518951 AEBP2Q6ZN18 517 aaPredicted RBP30.9■■■□□ 2.54
TOP1MT-206ENST00000518951 IDI1Q13907 227 aa30.89■■■□□ 2.54
TOP1MT-206ENST00000518951 UHRF1BP1Q6BDS2 1440 aa30.87■■■□□ 2.53
TOP1MT-206ENST00000518951 NLRP1Q9C000 1473 aa30.87■■■□□ 2.53
TOP1MT-206ENST00000518951 CLTCL1P53675 1640 aa30.87■■■□□ 2.53
TOP1MT-206ENST00000518951 ZNF142P52746 1687 aaPredicted RBP30.87■■■□□ 2.53
TOP1MT-206ENST00000518951 CEP170BQ9Y4F5 1589 aaPredicted RBP30.85■■■□□ 2.53
TOP1MT-206ENST00000518951 ANKRD30BQ9BXX2 1392 aa30.85■■■□□ 2.53
TOP1MT-206ENST00000518951 SLC52A1Q9NWF4 448 aa30.85■■■□□ 2.53
TOP1MT-206ENST00000518951 A2ML1A8K2U0 1454 aa30.84■■■□□ 2.53
TOP1MT-206ENST00000518951 LMTK3Q96Q04 1460 aa30.83■■■□□ 2.53
TOP1MT-206ENST00000518951 UBR1Q8IWV7 1749 aa30.81■■■□□ 2.52
TOP1MT-206ENST00000518951 MYO5BQ9ULV0 1848 aa30.81■■■□□ 2.52
TOP1MT-206ENST00000518951 TMEM131LA2VDJ0 1609 aa30.77■■■□□ 2.52
TOP1MT-206ENST00000518951 KIF1BO60333 1816 aa30.76■■■□□ 2.52
TOP1MT-206ENST00000518951 CCDC144AA2RUR9 1427 aa30.76■■■□□ 2.51
TOP1MT-206ENST00000518951 ADGRB3O60242 1522 aa30.75■■■□□ 2.51
TOP1MT-206ENST00000518951 KDM5AP29375 1690 aaKnown RBP30.75■■■□□ 2.51
TOP1MT-206ENST00000518951 HSPA2P54652 639 aa30.73■■■□□ 2.51
TOP1MT-206ENST00000518951 CHGAP10645 457 aaKnown RBP30.72■■■□□ 2.51
TOP1MT-206ENST00000518951 STAG3Q9UJ98 1225 aa30.7■■■□□ 2.51
TOP1MT-206ENST00000518951 THEMISQ8N1K5 641 aaPredicted RBP30.68■■■□□ 2.5
TOP1MT-206ENST00000518951 SIN3AQ96ST3 1273 aa30.66■■■□□ 2.5
TOP1MT-206ENST00000518951 SPATA31E1Q6ZUB1 1445 aa30.64■■■□□ 2.5
TOP1MT-206ENST00000518951 ARHGAP23Q9P227 1491 aa30.61■■■□□ 2.49
TOP1MT-206ENST00000518951 SLIT1O75093 1534 aa30.61■■■□□ 2.49
TOP1MT-206ENST00000518951 TMEM2Q9UHN6 1383 aa30.6■■■□□ 2.49
TOP1MT-206ENST00000518951 RGL3Q3MIN7 710 aa30.59■■■□□ 2.49
TOP1MT-206ENST00000518951 CCER1Q8TC90 406 aaPredicted RBP30.59■■■□□ 2.49
TOP1MT-206ENST00000518951 STRCQ7RTU9 1775 aa30.58■■■□□ 2.49
TOP1MT-206ENST00000518951 NEURL4Q96JN8 1562 aa30.58■■■□□ 2.49
TOP1MT-206ENST00000518951 ZNF326Q5BKZ1 582 aaKnown RBP30.57■■■□□ 2.48
TOP1MT-206ENST00000518951 ZFYVE9O95405 1425 aa30.57■■■□□ 2.48
TOP1MT-206ENST00000518951 NEUROD1Q13562 356 aa30.57■■■□□ 2.48
TOP1MT-206ENST00000518951 LTKP29376 864 aa30.56■■■□□ 2.48
TOP1MT-206ENST00000518951 RIMS2Q9UQ26 1411 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms