RNA–Protein interactions for RNA: ENST00000518531.5

TNFRSF10B-203, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 3

Gene TNFRSF10B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-203ENST00000518531 POLR1AO95602 1720 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF10B-203ENST00000518531 TNRQ92752 1358 aa25.35■■□□□ 1.65
TNFRSF10B-203ENST00000518531 KDM5DQ9BY66 1539 aa25.34■■□□□ 1.65
TNFRSF10B-203ENST00000518531 FBXO31Q5XUX0 539 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF10B-203ENST00000518531 PZPP20742 1482 aa25.34■■□□□ 1.65
TNFRSF10B-203ENST00000518531 KIF3BO15066 747 aa25.32■■□□□ 1.64
TNFRSF10B-203ENST00000518531 CCDC141Q6ZP82 1450 aa25.32■■□□□ 1.64
TNFRSF10B-203ENST00000518531 FAM135AQ9P2D6 1515 aa25.32■■□□□ 1.64
TNFRSF10B-203ENST00000518531 CPS1P31327 1500 aa25.31■■□□□ 1.64
TNFRSF10B-203ENST00000518531 CAMSAP2Q08AD1 1489 aa25.29■■□□□ 1.64
TNFRSF10B-203ENST00000518531 SHANK2Q9UPX8 1470 aa25.29■■□□□ 1.64
TNFRSF10B-203ENST00000518531 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
TNFRSF10B-203ENST00000518531 HSPA1LP34931 641 aa25.27■■□□□ 1.64
TNFRSF10B-203ENST00000518531 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
TNFRSF10B-203ENST00000518531 WASHC2CQ9Y4E1 1318 aa25.26■■□□□ 1.63
TNFRSF10B-203ENST00000518531 NCOA2Q15596 1464 aa25.26■■□□□ 1.63
TNFRSF10B-203ENST00000518531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.25■■□□□ 1.63
TNFRSF10B-203ENST00000518531 MED1Q15648 1581 aaPredicted RBP25.25■■□□□ 1.63
TNFRSF10B-203ENST00000518531 VWDEQ8N2E2 1590 aa25.24■■□□□ 1.63
TNFRSF10B-203ENST00000518531 NLRP1Q9C000 1473 aa25.23■■□□□ 1.63
TNFRSF10B-203ENST00000518531 MIA2Q96PC5 1412 aa25.23■■□□□ 1.63
TNFRSF10B-203ENST00000518531 TOM1O60784 492 aa25.23■■□□□ 1.63
TNFRSF10B-203ENST00000518531 ANKLE2Q86XL3 938 aa25.22■■□□□ 1.63
TNFRSF10B-203ENST00000518531 UGGT1Q9NYU2 1555 aa25.22■■□□□ 1.63
TNFRSF10B-203ENST00000518531 DEPDC5O75140 1603 aa25.2■■□□□ 1.62
TNFRSF10B-203ENST00000518531 ARHGEF5Q12774 1597 aa25.2■■□□□ 1.62
TNFRSF10B-203ENST00000518531 RSPH4AQ5TD94 716 aa25.2■■□□□ 1.62
TNFRSF10B-203ENST00000518531 THEMISQ8N1K5 641 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF10B-203ENST00000518531 MED14O60244 1454 aa25.19■■□□□ 1.62
TNFRSF10B-203ENST00000518531 NPHP4O75161 1426 aaPredicted RBP25.19■■□□□ 1.62
TNFRSF10B-203ENST00000518531 ALKQ9UM73 1620 aa25.17■■□□□ 1.62
TNFRSF10B-203ENST00000518531 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
TNFRSF10B-203ENST00000518531 IQGAP1P46940 1657 aa25.14■■□□□ 1.62
TNFRSF10B-203ENST00000518531 ABCC3O15438 1527 aa25.13■■□□□ 1.61
TNFRSF10B-203ENST00000518531 TSPY4P0CV99 314 aa25.12■■□□□ 1.61
TNFRSF10B-203ENST00000518531 TSPY10P0CW01 314 aa25.12■■□□□ 1.61
TNFRSF10B-203ENST00000518531 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
TNFRSF10B-203ENST00000518531 STRCP1A6NGW2 1772 aa25.09■■□□□ 1.61
TNFRSF10B-203ENST00000518531 MAST1Q9Y2H9 1570 aa25.09■■□□□ 1.61
TNFRSF10B-203ENST00000518531 ERVK-7P63135 1459 aa25.08■■□□□ 1.6
TNFRSF10B-203ENST00000518531 MROH1Q8NDA8 1641 aa25.06■■□□□ 1.6
TNFRSF10B-203ENST00000518531 EIF2AK4Q9P2K8 1649 aaKnown RBP25.06■■□□□ 1.6
TNFRSF10B-203ENST00000518531 LRRC7Q96NW7 1537 aa25.06■■□□□ 1.6
TNFRSF10B-203ENST00000518531 SYNMO15061 1565 aa25.05■■□□□ 1.6
TNFRSF10B-203ENST00000518531 LRRC9Q6ZRR7 1453 aa25.03■■□□□ 1.6
TNFRSF10B-203ENST00000518531 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
TNFRSF10B-203ENST00000518531 CEP152O94986 1710 aa25■■□□□ 1.59
TNFRSF10B-203ENST00000518531 UBR1Q8IWV7 1749 aa25■■□□□ 1.59
TNFRSF10B-203ENST00000518531 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
TNFRSF10B-203ENST00000518531 SCAF11Q99590 1463 aaKnown RBP24.97■■□□□ 1.59
TNFRSF10B-203ENST00000518531 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
TNFRSF10B-203ENST00000518531 DUOX2Q9NRD8 1548 aa24.94■■□□□ 1.58
TNFRSF10B-203ENST00000518531 ARHGAP23Q9P227 1491 aa24.93■■□□□ 1.58
TNFRSF10B-203ENST00000518531 MYOM3Q5VTT5 1437 aa24.93■■□□□ 1.58
TNFRSF10B-203ENST00000518531 CFAP65Q6ZU64 1925 aaKnown RBP24.92■■□□□ 1.58
TNFRSF10B-203ENST00000518531 SLIT1O75093 1534 aa24.92■■□□□ 1.58
TNFRSF10B-203ENST00000518531 LTKP29376 864 aa24.92■■□□□ 1.58
TNFRSF10B-203ENST00000518531 KANK4Q5T7N3 995 aaPredicted RBP24.91■■□□□ 1.58
TNFRSF10B-203ENST00000518531 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
TNFRSF10B-203ENST00000518531 ARHGAP31Q2M1Z3 1444 aa24.89■■□□□ 1.58
TNFRSF10B-203ENST00000518531 TXNDC2Q86VQ3 553 aa24.89■■□□□ 1.58
TNFRSF10B-203ENST00000518531 MAP3K1Q13233 1512 aa24.88■■□□□ 1.57
TNFRSF10B-203ENST00000518531 XIRP1Q702N8 1843 aaKnown RBP24.87■■□□□ 1.57
TNFRSF10B-203ENST00000518531 KIF15Q9NS87 1388 aa24.87■■□□□ 1.57
TNFRSF10B-203ENST00000518531 PIK3C2BO00750 1634 aa24.85■■□□□ 1.57
TNFRSF10B-203ENST00000518531 ERBINQ96RT1 1412 aa24.85■■□□□ 1.57
TNFRSF10B-203ENST00000518531 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
TNFRSF10B-203ENST00000518531 EID1Q9Y6B2 187 aa24.83■■□□□ 1.57
TNFRSF10B-203ENST00000518531 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
TNFRSF10B-203ENST00000518531 ABCC5O15440 1437 aa24.81■■□□□ 1.56
TNFRSF10B-203ENST00000518531 RRP7BPQ9NSQ0 103 aa24.8■■□□□ 1.56
TNFRSF10B-203ENST00000518531 RGS17Q9UGC6 210 aaPredicted RBP24.8■■□□□ 1.56
TNFRSF10B-203ENST00000518531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.562e-13■■■■□ 24.6
TNFRSF10B-203ENST00000518531 PTPN23Q9H3S7 1636 aa24.77■■□□□ 1.56
TNFRSF10B-203ENST00000518531 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
TNFRSF10B-203ENST00000518531 FAM135BQ49AJ0 1406 aa24.77■■□□□ 1.56
TNFRSF10B-203ENST00000518531 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
TNFRSF10B-203ENST00000518531 KDM5AP29375 1690 aaKnown RBP24.75■■□□□ 1.55
TNFRSF10B-203ENST00000518531 STAG3Q9UJ98 1225 aa24.74■■□□□ 1.55
TNFRSF10B-203ENST00000518531 TMEM94Q12767 1356 aa24.74■■□□□ 1.55
TNFRSF10B-203ENST00000518531 KANK1Q14678 1352 aa24.74■■□□□ 1.55
TNFRSF10B-203ENST00000518531 DAPK1P53355 1430 aa24.74■■□□□ 1.55
TNFRSF10B-203ENST00000518531 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
TNFRSF10B-203ENST00000518531 IDI1Q13907 227 aa24.71■■□□□ 1.55
TNFRSF10B-203ENST00000518531 TET3O43151 1660 aa24.71■■□□□ 1.55
TNFRSF10B-203ENST00000518531 ROBO1Q9Y6N7 1651 aa24.69■■□□□ 1.54
TNFRSF10B-203ENST00000518531 KCNA6P17658 529 aa24.69■■□□□ 1.54
TNFRSF10B-203ENST00000518531 SLC26A8Q96RN1 970 aa24.69■■□□□ 1.54
TNFRSF10B-203ENST00000518531 ADGRB3O60242 1522 aa24.67■■□□□ 1.54
TNFRSF10B-203ENST00000518531 PROSER2Q86WR7 435 aaPredicted RBP24.66■■□□□ 1.54
TNFRSF10B-203ENST00000518531 RBM33Q96EV2 1170 aaKnown RBP24.66■■□□□ 1.54
TNFRSF10B-203ENST00000518531 NOS1P29475 1434 aa24.66■■□□□ 1.54
TNFRSF10B-203ENST00000518531 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
TNFRSF10B-203ENST00000518531 NWD1Q149M9 1564 aa24.66■■□□□ 1.54
TNFRSF10B-203ENST00000518531 ANKRD30AQ9BXX3 1397 aa24.65■■□□□ 1.54
TNFRSF10B-203ENST00000518531 NKTRP30414 1462 aaKnown RBP24.64■■□□□ 1.54
TNFRSF10B-203ENST00000518531 POTEAQ6S8J7 498 aa24.64■■□□□ 1.54
TNFRSF10B-203ENST00000518531 CHIC2Q9UKJ5 165 aa24.64■■□□□ 1.54
TNFRSF10B-203ENST00000518531 APLP2Q06481 763 aa24.58■■□□□ 1.53
TNFRSF10B-203ENST00000518531 MSH6P52701 1360 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms