RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 MRPL50Q8N5N7 158 aaKnown RBP9.56□□□□□ -0.88
PABPC1-206ENST00000518293 PCDHGA10Q9Y5H3 936 aa9.56□□□□□ -0.88
PABPC1-206ENST00000518293 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
PABPC1-206ENST00000518293 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
PABPC1-206ENST00000518293 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
PABPC1-206ENST00000518293 PHF14O94880 888 aa9.54□□□□□ -0.88
PABPC1-206ENST00000518293 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
PABPC1-206ENST00000518293 TYW1BQ6NUM6 668 aa9.54□□□□□ -0.88
PABPC1-206ENST00000518293 WNT2BQ93097 391 aa9.53□□□□□ -0.88
PABPC1-206ENST00000518293 DPYSL4O14531 572 aa9.51□□□□□ -0.89
PABPC1-206ENST00000518293 THSD4Q6ZMP0 1018 aa9.51□□□□□ -0.89
PABPC1-206ENST00000518293 EPAS1Q99814 870 aa9.49□□□□□ -0.89
PABPC1-206ENST00000518293 WDR70Q9NW82 654 aa9.49□□□□□ -0.89
PABPC1-206ENST00000518293 RABGEF1Q9UJ41 708 aa9.49□□□□□ -0.89
PABPC1-206ENST00000518293 COL9A1P20849 921 aa9.48□□□□□ -0.89
PABPC1-206ENST00000518293 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
PABPC1-206ENST00000518293 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
PABPC1-206ENST00000518293 ANKK1Q8NFD2 765 aa9.44□□□□□ -0.9
PABPC1-206ENST00000518293 DDX12PQ92771 950 aa9.44□□□□□ -0.9
PABPC1-206ENST00000518293 E2F4Q16254 413 aa9.43□□□□□ -0.9
PABPC1-206ENST00000518293 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
PABPC1-206ENST00000518293 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
PABPC1-206ENST00000518293 KIAA1468Q9P260 1216 aa9.42□□□□□ -0.9
PABPC1-206ENST00000518293 ONECUT3O60422 494 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-206ENST00000518293 NBR1Q14596 966 aa9.4□□□□□ -0.9
PABPC1-206ENST00000518293 PDIA6Q15084 440 aa9.4□□□□□ -0.9
PABPC1-206ENST00000518293 IFFO2Q5TF58 517 aa9.4□□□□□ -0.9
PABPC1-206ENST00000518293 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
PABPC1-206ENST00000518293 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
PABPC1-206ENST00000518293 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
PABPC1-206ENST00000518293 EN1Q05925 392 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-206ENST00000518293 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
PABPC1-206ENST00000518293 MAP3K7O43318 606 aa9.37□□□□□ -0.91
PABPC1-206ENST00000518293 BCAMP50895 628 aa9.37□□□□□ -0.91
PABPC1-206ENST00000518293 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-206ENST00000518293 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
PABPC1-206ENST00000518293 FAM98CQ17RN3 349 aaKnown RBP9.34□□□□□ -0.91
PABPC1-206ENST00000518293 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
PABPC1-206ENST00000518293 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-206ENST00000518293 A0A0G2JS52 829 aa9.33□□□□□ -0.92
PABPC1-206ENST00000518293 RGS20O76081 388 aa9.33□□□□□ -0.92
PABPC1-206ENST00000518293 NYAP1Q6ZVC0 841 aa9.33□□□□□ -0.92
PABPC1-206ENST00000518293 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
PABPC1-206ENST00000518293 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
PABPC1-206ENST00000518293 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
PABPC1-206ENST00000518293 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
PABPC1-206ENST00000518293 LRCH3Q96II8 777 aa9.31□□□□□ -0.92
PABPC1-206ENST00000518293 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.31□□□□□ -0.92
PABPC1-206ENST00000518293 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
PABPC1-206ENST00000518293 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
PABPC1-206ENST00000518293 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
PABPC1-206ENST00000518293 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
PABPC1-206ENST00000518293 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
PABPC1-206ENST00000518293 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
PABPC1-206ENST00000518293 HPS5Q9UPZ3 1129 aa9.28□□□□□ -0.92
PABPC1-206ENST00000518293 PRSS12P56730 875 aa9.27□□□□□ -0.93
PABPC1-206ENST00000518293 KCNC4Q03721 635 aa9.25□□□□□ -0.93
PABPC1-206ENST00000518293 PRIM1P49642 420 aaKnown RBP9.24□□□□□ -0.93
PABPC1-206ENST00000518293 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
PABPC1-206ENST00000518293 SMAPO00193 183 aa9.23□□□□□ -0.93
PABPC1-206ENST00000518293 PPP4CP60510 307 aa9.23□□□□□ -0.93
PABPC1-206ENST00000518293 OSBPP22059 807 aa9.22□□□□□ -0.93
PABPC1-206ENST00000518293 TATDN2Q93075 761 aa9.22□□□□□ -0.93
PABPC1-206ENST00000518293 IRX2Q9BZI1 471 aaPredicted RBP9.22□□□□□ -0.93
PABPC1-206ENST00000518293 PNMA3Q9UL41 463 aa9.22□□□□□ -0.93
PABPC1-206ENST00000518293 SEMA3EO15041 775 aa9.21□□□□□ -0.94
PABPC1-206ENST00000518293 SAMD7Q7Z3H4 446 aa9.21□□□□□ -0.94
PABPC1-206ENST00000518293 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
PABPC1-206ENST00000518293 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.94
PABPC1-206ENST00000518293 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
PABPC1-206ENST00000518293 RBM27Q9P2N5 1060 aaKnown RBP9.19□□□□□ -0.94
PABPC1-206ENST00000518293 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
PABPC1-206ENST00000518293 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
PABPC1-206ENST00000518293 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
PABPC1-206ENST00000518293 RNF40O75150 1001 aa9.16□□□□□ -0.94
PABPC1-206ENST00000518293 C3orf80F5H4A9 247 aa9.15□□□□□ -0.94
PABPC1-206ENST00000518293 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
PABPC1-206ENST00000518293 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
PABPC1-206ENST00000518293 BCANQ96GW7 911 aa9.12□□□□□ -0.95
PABPC1-206ENST00000518293 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
PABPC1-206ENST00000518293 IL21Q9HBE4 155 aa9.11□□□□□ -0.95
PABPC1-206ENST00000518293 NPDC1Q9NQX5 325 aaPredicted RBP9.11□□□□□ -0.95
PABPC1-206ENST00000518293 SLC4A3P48751 1232 aa9.1□□□□□ -0.95
PABPC1-206ENST00000518293 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
PABPC1-206ENST00000518293 MTRQ99707 1265 aa9.1□□□□□ -0.95
PABPC1-206ENST00000518293 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
PABPC1-206ENST00000518293 SLF2Q8IX21 1173 aa9.08□□□□□ -0.96
PABPC1-206ENST00000518293 APLP1P51693 650 aa9.07□□□□□ -0.96
PABPC1-206ENST00000518293 SMYD5Q6GMV2 418 aa9.06□□□□□ -0.96
PABPC1-206ENST00000518293 RBM26Q5T8P6 1007 aaKnown RBP9.05□□□□□ -0.96
PABPC1-206ENST00000518293 Q6ZNB5 142 aa9.04□□□□□ -0.96
PABPC1-206ENST00000518293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
PABPC1-206ENST00000518293 EYA1Q99502 592 aa9.04□□□□□ -0.96
PABPC1-206ENST00000518293 ZNF516Q92618 1163 aa9.03□□□□□ -0.96
PABPC1-206ENST00000518293 NUTM2FA1L443 756 aa9.02□□□□□ -0.97
PABPC1-206ENST00000518293 PTGDRQ13258 359 aa9.02□□□□□ -0.97
PABPC1-206ENST00000518293 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
PABPC1-206ENST00000518293 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
PABPC1-206ENST00000518293 LAPTM4AQ15012 233 aa9.01□□□□□ -0.97
PABPC1-206ENST00000518293 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms