RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ATP10AO60312 1499 aa19.6■□□□□ 0.73
PABPC1-205ENST00000518196 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
PABPC1-205ENST00000518196 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
PABPC1-205ENST00000518196 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
PABPC1-205ENST00000518196 ABCA6Q8N139 1617 aa19.58■□□□□ 0.72
PABPC1-205ENST00000518196 PLXNC1O60486 1568 aa19.57■□□□□ 0.72
PABPC1-205ENST00000518196 DIP2CQ9Y2E4 1556 aa19.57■□□□□ 0.72
PABPC1-205ENST00000518196 ADGRL2O95490 1459 aa19.57■□□□□ 0.72
PABPC1-205ENST00000518196 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
PABPC1-205ENST00000518196 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
PABPC1-205ENST00000518196 NCOA1Q15788 1441 aa19.56■□□□□ 0.72
PABPC1-205ENST00000518196 KIF15Q9NS87 1388 aa19.55■□□□□ 0.72
PABPC1-205ENST00000518196 A2MP01023 1474 aa19.54■□□□□ 0.72
PABPC1-205ENST00000518196 DHX29Q7Z478 1369 aaKnown RBP19.53■□□□□ 0.72
PABPC1-205ENST00000518196 REREQ9P2R6 1566 aa19.52■□□□□ 0.71
PABPC1-205ENST00000518196 DUOX2Q9NRD8 1548 aa19.51■□□□□ 0.71
PABPC1-205ENST00000518196 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
PABPC1-205ENST00000518196 SPINK5Q9NQ38 1064 aaPredicted RBP19.48■□□□□ 0.71
PABPC1-205ENST00000518196 AGLP35573 1532 aa19.46■□□□□ 0.71
PABPC1-205ENST00000518196 ERBINQ96RT1 1412 aa19.46■□□□□ 0.71
PABPC1-205ENST00000518196 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
PABPC1-205ENST00000518196 KIF3BO15066 747 aa19.45■□□□□ 0.7
PABPC1-205ENST00000518196 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
PABPC1-205ENST00000518196 ZNF219Q9P2Y4 722 aaPredicted RBP19.44■□□□□ 0.7
PABPC1-205ENST00000518196 NAIPQ13075 1403 aa19.43■□□□□ 0.7
PABPC1-205ENST00000518196 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
PABPC1-205ENST00000518196 EIF2AK4Q9P2K8 1649 aaKnown RBP19.43■□□□□ 0.7
PABPC1-205ENST00000518196 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
PABPC1-205ENST00000518196 SIGLEC1Q9BZZ2 1709 aa19.42■□□□□ 0.7
PABPC1-205ENST00000518196 MLECQ14165 292 aa19.41■□□□□ 0.7
PABPC1-205ENST00000518196 BCORL1Q5H9F3 1711 aa19.4■□□□□ 0.7
PABPC1-205ENST00000518196 GGT6Q6P531 493 aa19.4■□□□□ 0.7
PABPC1-205ENST00000518196 SETD5Q9C0A6 1442 aa19.4■□□□□ 0.7
PABPC1-205ENST00000518196 CAPN15O75808 1086 aa19.39■□□□□ 0.69
PABPC1-205ENST00000518196 ACIN1Q9UKV3 1341 aaKnown RBP19.35■□□□□ 0.69
PABPC1-205ENST00000518196 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
PABPC1-205ENST00000518196 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
PABPC1-205ENST00000518196 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
PABPC1-205ENST00000518196 KANK1Q14678 1352 aa19.33■□□□□ 0.69
PABPC1-205ENST00000518196 DEPDC5O75140 1603 aa19.32■□□□□ 0.68
PABPC1-205ENST00000518196 HRCP23327 699 aa19.31■□□□□ 0.68
PABPC1-205ENST00000518196 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
PABPC1-205ENST00000518196 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
PABPC1-205ENST00000518196 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
PABPC1-205ENST00000518196 UNC13BO14795 1591 aa19.3■□□□□ 0.68
PABPC1-205ENST00000518196 ADAMTSL3P82987 1691 aa19.3■□□□□ 0.68
PABPC1-205ENST00000518196 PRDM15P57071 1507 aaPredicted RBP19.29■□□□□ 0.68
PABPC1-205ENST00000518196 FAM135AQ9P2D6 1515 aa19.29■□□□□ 0.68
PABPC1-205ENST00000518196 FER1L4A9Z1Z3 1794 aa19.29■□□□□ 0.68
PABPC1-205ENST00000518196 MROH1Q8NDA8 1641 aa19.29■□□□□ 0.68
PABPC1-205ENST00000518196 NUP155O75694 1391 aa19.28■□□□□ 0.68
PABPC1-205ENST00000518196 CNTLNQ9NXG0 1405 aa19.27■□□□□ 0.68
PABPC1-205ENST00000518196 KDM5DQ9BY66 1539 aa19.26■□□□□ 0.67
PABPC1-205ENST00000518196 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
PABPC1-205ENST00000518196 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
PABPC1-205ENST00000518196 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
PABPC1-205ENST00000518196 CEP152O94986 1710 aa19.24■□□□□ 0.67
PABPC1-205ENST00000518196 VWDEQ8N2E2 1590 aa19.23■□□□□ 0.67
PABPC1-205ENST00000518196 ABCC3O15438 1527 aa19.23■□□□□ 0.67
PABPC1-205ENST00000518196 RIMS1Q86UR5 1692 aaKnown RBP19.23■□□□□ 0.67
PABPC1-205ENST00000518196 IQGAP3Q86VI3 1631 aa19.22■□□□□ 0.67
PABPC1-205ENST00000518196 KDM4FA0A1W2PPD8 638 aa19.22■□□□□ 0.67
PABPC1-205ENST00000518196 MROH2AA6NES4 1674 aa19.21■□□□□ 0.67
PABPC1-205ENST00000518196 LMTK2Q8IWU2 1503 aa19.2■□□□□ 0.66
PABPC1-205ENST00000518196 FKBP8Q14318 412 aa19.2■□□□□ 0.66
PABPC1-205ENST00000518196 ZMYM3Q14202 1370 aa19.19■□□□□ 0.66
PABPC1-205ENST00000518196 CAMSAP1Q5T5Y3 1602 aa19.18■□□□□ 0.66
PABPC1-205ENST00000518196 TET3O43151 1660 aa19.18■□□□□ 0.66
PABPC1-205ENST00000518196 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
PABPC1-205ENST00000518196 PZPP20742 1482 aa19.16■□□□□ 0.66
PABPC1-205ENST00000518196 CFAP65Q6ZU64 1925 aaKnown RBP19.15■□□□□ 0.66
PABPC1-205ENST00000518196 ARHGAP31Q2M1Z3 1444 aa19.15■□□□□ 0.66
PABPC1-205ENST00000518196 PTPRMP28827 1452 aa19.15■□□□□ 0.66
PABPC1-205ENST00000518196 C3P01024 1663 aa19.14■□□□□ 0.66
PABPC1-205ENST00000518196 CEBPAP49715 358 aaPredicted RBP19.14■□□□□ 0.65
PABPC1-205ENST00000518196 POLA2Q14181 598 aa19.14■□□□□ 0.65
PABPC1-205ENST00000518196 EFCAB6Q5THR3 1501 aa19.14■□□□□ 0.65
PABPC1-205ENST00000518196 PKD2Q13563 968 aa19.13■□□□□ 0.65
PABPC1-205ENST00000518196 RPRD2Q5VT52 1461 aaKnown RBP19.11■□□□□ 0.65
PABPC1-205ENST00000518196 NPATQ14207 1427 aa19.11■□□□□ 0.65
PABPC1-205ENST00000518196 E9PCH4 1651 aa19.11■□□□□ 0.65
PABPC1-205ENST00000518196 ABCB7O75027 752 aa19.1■□□□□ 0.65
PABPC1-205ENST00000518196 FBXO31Q5XUX0 539 aaPredicted RBP19.09■□□□□ 0.65
PABPC1-205ENST00000518196 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.65
PABPC1-205ENST00000518196 PREX1Q8TCU6 1659 aa19.07■□□□□ 0.64
PABPC1-205ENST00000518196 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
PABPC1-205ENST00000518196 SPATA31D1Q6ZQQ2 1576 aa19.05■□□□□ 0.64
PABPC1-205ENST00000518196 TNRQ92752 1358 aa19.04■□□□□ 0.64
PABPC1-205ENST00000518196 NOS1P29475 1434 aa19.03■□□□□ 0.64
PABPC1-205ENST00000518196 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
PABPC1-205ENST00000518196 PTPRTO14522 1441 aa19.01■□□□□ 0.63
PABPC1-205ENST00000518196 DHX57Q6P158 1386 aaKnown RBP19.01■□□□□ 0.63
PABPC1-205ENST00000518196 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
PABPC1-205ENST00000518196 SYNMO15061 1565 aa18.98■□□□□ 0.63
PABPC1-205ENST00000518196 TRPM2O94759 1503 aa18.97■□□□□ 0.63
PABPC1-205ENST00000518196 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
PABPC1-205ENST00000518196 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
PABPC1-205ENST00000518196 MKRN4PQ13434 485 aaPredicted RBP18.96■□□□□ 0.63
PABPC1-205ENST00000518196 IDI1Q13907 227 aa18.96■□□□□ 0.63
PABPC1-205ENST00000518196 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms