RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
CTNNA1-206ENST00000517980 MYOM3Q5VTT5 1437 aa27.19■■□□□ 1.94
CTNNA1-206ENST00000517980 PKD2Q13563 968 aa27.19■■□□□ 1.94
CTNNA1-206ENST00000517980 ZNF142P52746 1687 aaPredicted RBP27.18■■□□□ 1.94
CTNNA1-206ENST00000517980 LTBP4Q8N2S1 1624 aa27.18■■□□□ 1.94
CTNNA1-206ENST00000517980 TNRQ92752 1358 aa27.16■■□□□ 1.94
CTNNA1-206ENST00000517980 MIA2Q96PC5 1412 aa27.16■■□□□ 1.94
CTNNA1-206ENST00000517980 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
CTNNA1-206ENST00000517980 KDM5DQ9BY66 1539 aa27.15■■□□□ 1.94
CTNNA1-206ENST00000517980 A2ML1A8K2U0 1454 aa27.14■■□□□ 1.94
CTNNA1-206ENST00000517980 DNMT1P26358 1616 aaKnown RBP27.13■■□□□ 1.93
CTNNA1-206ENST00000517980 CFAP65Q6ZU64 1925 aaKnown RBP27.13■■□□□ 1.93
CTNNA1-206ENST00000517980 MAST1Q9Y2H9 1570 aa27.12■■□□□ 1.93
CTNNA1-206ENST00000517980 PZPP20742 1482 aa27.12■■□□□ 1.93
CTNNA1-206ENST00000517980 PLA2R1Q13018 1463 aa27.12■■□□□ 1.93
CTNNA1-206ENST00000517980 TCOF1Q13428 1488 aaKnown RBP27.1■■□□□ 1.93
CTNNA1-206ENST00000517980 RRP7BPQ9NSQ0 103 aa27.09■■□□□ 1.93
CTNNA1-206ENST00000517980 ABCC5O15440 1437 aa27.05■■□□□ 1.92
CTNNA1-206ENST00000517980 THEMISQ8N1K5 641 aaPredicted RBP27.04■■□□□ 1.92
CTNNA1-206ENST00000517980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
CTNNA1-206ENST00000517980 FAM135AQ9P2D6 1515 aa27.04■■□□□ 1.92
CTNNA1-206ENST00000517980 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
CTNNA1-206ENST00000517980 RNF17Q9BXT8 1623 aaKnown RBP27.03■■□□□ 1.92
CTNNA1-206ENST00000517980 CHIC2Q9UKJ5 165 aa27.03■■□□□ 1.92
CTNNA1-206ENST00000517980 ANKLE2Q86XL3 938 aa27.02■■□□□ 1.92
CTNNA1-206ENST00000517980 ABCC3O15438 1527 aa27.01■■□□□ 1.91
CTNNA1-206ENST00000517980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.01■■□□□ 1.91
CTNNA1-206ENST00000517980 DUOX2Q9NRD8 1548 aa27■■□□□ 1.91
CTNNA1-206ENST00000517980 CEP152O94986 1710 aa26.99■■□□□ 1.91
CTNNA1-206ENST00000517980 KIF15Q9NS87 1388 aa26.99■■□□□ 1.91
CTNNA1-206ENST00000517980 EIF2AK4Q9P2K8 1649 aaKnown RBP26.98■■□□□ 1.91
CTNNA1-206ENST00000517980 UBAP1LF5GYI3 381 aa26.98■■□□□ 1.91
CTNNA1-206ENST00000517980 MROH1Q8NDA8 1641 aa26.98■■□□□ 1.91
CTNNA1-206ENST00000517980 FGD6Q6ZV73 1430 aa26.97■■□□□ 1.91
CTNNA1-206ENST00000517980 UGGT1Q9NYU2 1555 aa26.97■■□□□ 1.91
CTNNA1-206ENST00000517980 POLR1AO95602 1720 aaPredicted RBP26.96■■□□□ 1.91
CTNNA1-206ENST00000517980 IQSEC2Q5JU85 1478 aa26.96■■□□□ 1.91
CTNNA1-206ENST00000517980 NLRP1Q9C000 1473 aa26.96■■□□□ 1.91
CTNNA1-206ENST00000517980 DAPK1P53355 1430 aa26.96■■□□□ 1.91
CTNNA1-206ENST00000517980 NEURL4Q96JN8 1562 aa26.94■■□□□ 1.9
CTNNA1-206ENST00000517980 CROCC2H7BZ55 1655 aa26.94■■□□□ 1.9
CTNNA1-206ENST00000517980 ZC3H13Q5T200 1668 aaKnown RBP26.93■■□□□ 1.9
CTNNA1-206ENST00000517980 ERVK-7P63135 1459 aa26.92■■□□□ 1.9
CTNNA1-206ENST00000517980 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
CTNNA1-206ENST00000517980 SPATA31D1Q6ZQQ2 1576 aa26.91■■□□□ 1.9
CTNNA1-206ENST00000517980 SHANK2Q9UPX8 1470 aa26.9■■□□□ 1.9
CTNNA1-206ENST00000517980 ERBINQ96RT1 1412 aa26.87■■□□□ 1.89
CTNNA1-206ENST00000517980 ANKRD30AQ9BXX3 1397 aa26.86■■□□□ 1.89
CTNNA1-206ENST00000517980 DISP3Q9P2K9 1392 aa26.86■■□□□ 1.89
CTNNA1-206ENST00000517980 NPHP4O75161 1426 aaPredicted RBP26.86■■□□□ 1.89
CTNNA1-206ENST00000517980 KANK1Q14678 1352 aa26.82■■□□□ 1.88
CTNNA1-206ENST00000517980 MED14O60244 1454 aa26.81■■□□□ 1.88
CTNNA1-206ENST00000517980 PRDM15P57071 1507 aaPredicted RBP26.81■■□□□ 1.88
CTNNA1-206ENST00000517980 DEPDC5O75140 1603 aa26.81■■□□□ 1.88
CTNNA1-206ENST00000517980 PIP4K2BP78356 416 aa26.81■■□□□ 1.88
CTNNA1-206ENST00000517980 SCAF1Q9H7N4 1312 aaKnown RBP26.81■■□□□ 1.88
CTNNA1-206ENST00000517980 UBR1Q8IWV7 1749 aa26.8■■□□□ 1.88
CTNNA1-206ENST00000517980 LTKP29376 864 aa26.8■■□□□ 1.88
CTNNA1-206ENST00000517980 TXNDC2Q86VQ3 553 aa26.79■■□□□ 1.88
CTNNA1-206ENST00000517980 ARHGAP31Q2M1Z3 1444 aa26.79■■□□□ 1.88
CTNNA1-206ENST00000517980 VWDEQ8N2E2 1590 aa26.79■■□□□ 1.88
CTNNA1-206ENST00000517980 ILDR2Q71H61 639 aa26.78■■□□□ 1.88
CTNNA1-206ENST00000517980 IQGAP1P46940 1657 aa26.78■■□□□ 1.88
CTNNA1-206ENST00000517980 PPARGC1BQ86YN6 1023 aaKnown RBP26.77■■□□□ 1.88
CTNNA1-206ENST00000517980 CPS1P31327 1500 aa26.76■■□□□ 1.87
CTNNA1-206ENST00000517980 STAG3Q9UJ98 1225 aa26.76■■□□□ 1.87
CTNNA1-206ENST00000517980 TOM1O60784 492 aa26.75■■□□□ 1.87
CTNNA1-206ENST00000517980 IDI1Q13907 227 aa26.74■■□□□ 1.87
CTNNA1-206ENST00000517980 STRCP1A6NGW2 1772 aa26.73■■□□□ 1.87
CTNNA1-206ENST00000517980 PIK3C2BO00750 1634 aa26.7■■□□□ 1.86
CTNNA1-206ENST00000517980 EID1Q9Y6B2 187 aa26.7■■□□□ 1.86
CTNNA1-206ENST00000517980 ADGRL2O95490 1459 aa26.69■■□□□ 1.86
CTNNA1-206ENST00000517980 SCAF11Q99590 1463 aaKnown RBP26.69■■□□□ 1.86
CTNNA1-206ENST00000517980 HSPA1LP34931 641 aa26.69■■□□□ 1.86
CTNNA1-206ENST00000517980 ARHGAP23Q9P227 1491 aa26.67■■□□□ 1.86
CTNNA1-206ENST00000517980 ANKRD50Q9ULJ7 1429 aa26.66■■□□□ 1.86
CTNNA1-206ENST00000517980 LMTK2Q8IWU2 1503 aa26.66■■□□□ 1.86
CTNNA1-206ENST00000517980 SLIT1O75093 1534 aa26.65■■□□□ 1.86
CTNNA1-206ENST00000517980 ITGAEP38570 1179 aa26.65■■□□□ 1.86
CTNNA1-206ENST00000517980 TMEM2Q9UHN6 1383 aa26.64■■□□□ 1.86
CTNNA1-206ENST00000517980 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.86
CTNNA1-206ENST00000517980 LRRC7Q96NW7 1537 aa26.63■■□□□ 1.85
CTNNA1-206ENST00000517980 SYNMO15061 1565 aa26.63■■□□□ 1.85
CTNNA1-206ENST00000517980 NOS1P29475 1434 aa26.6■■□□□ 1.85
CTNNA1-206ENST00000517980 EFCAB6Q5THR3 1501 aa26.59■■□□□ 1.85
CTNNA1-206ENST00000517980 ALKQ9UM73 1620 aa26.58■■□□□ 1.85
CTNNA1-206ENST00000517980 SLC26A8Q96RN1 970 aa26.58■■□□□ 1.85
CTNNA1-206ENST00000517980 SLC52A1Q9NWF4 448 aa26.57■■□□□ 1.84
CTNNA1-206ENST00000517980 BCANQ96GW7 911 aa26.55■■□□□ 1.84
CTNNA1-206ENST00000517980 RBM33Q96EV2 1170 aaKnown RBP26.52■■□□□ 1.84
CTNNA1-206ENST00000517980 MYO5BQ9ULV0 1848 aa26.52■■□□□ 1.84
CTNNA1-206ENST00000517980 KDM5AP29375 1690 aaKnown RBP26.51■■□□□ 1.83
CTNNA1-206ENST00000517980 CHGAP10645 457 aaKnown RBP26.51■■□□□ 1.83
CTNNA1-206ENST00000517980 SOCS7O14512 581 aa26.5■■□□□ 1.83
CTNNA1-206ENST00000517980 XIRP1Q702N8 1843 aaKnown RBP26.5■■□□□ 1.83
CTNNA1-206ENST00000517980 TET3O43151 1660 aa26.49■■□□□ 1.83
CTNNA1-206ENST00000517980 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
CTNNA1-206ENST00000517980 KCNA6P17658 529 aa26.48■■□□□ 1.83
CTNNA1-206ENST00000517980 ADGRB3O60242 1522 aa26.48■■□□□ 1.83
CTNNA1-206ENST00000517980 RPRD2Q5VT52 1461 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms