RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 KDM5DQ9BY66 1539 aa18.61■□□□□ 0.57
TRAPPC9-203ENST00000517667 MBD5Q9P267 1494 aa18.61■□□□□ 0.57
TRAPPC9-203ENST00000517667 PZPP20742 1482 aa18.6■□□□□ 0.57
TRAPPC9-203ENST00000517667 DHX29Q7Z478 1369 aaKnown RBP18.6■□□□□ 0.57
TRAPPC9-203ENST00000517667 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
TRAPPC9-203ENST00000517667 TOM1O60784 492 aa18.59■□□□□ 0.57
TRAPPC9-203ENST00000517667 TNRQ92752 1358 aa18.58■□□□□ 0.57
TRAPPC9-203ENST00000517667 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
TRAPPC9-203ENST00000517667 DEPDC5O75140 1603 aa18.56■□□□□ 0.56
TRAPPC9-203ENST00000517667 HSPA1LP34931 641 aa18.56■□□□□ 0.56
TRAPPC9-203ENST00000517667 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC9-203ENST00000517667 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
TRAPPC9-203ENST00000517667 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
TRAPPC9-203ENST00000517667 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
TRAPPC9-203ENST00000517667 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
TRAPPC9-203ENST00000517667 VWDEQ8N2E2 1590 aa18.54■□□□□ 0.56
TRAPPC9-203ENST00000517667 ANKLE2Q86XL3 938 aa18.53■□□□□ 0.56
TRAPPC9-203ENST00000517667 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
TRAPPC9-203ENST00000517667 MED14O60244 1454 aa18.52■□□□□ 0.56
TRAPPC9-203ENST00000517667 KIF3BO15066 747 aa18.52■□□□□ 0.56
TRAPPC9-203ENST00000517667 THEMISQ8N1K5 641 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC9-203ENST00000517667 IQGAP1P46940 1657 aa18.52■□□□□ 0.56
TRAPPC9-203ENST00000517667 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
TRAPPC9-203ENST00000517667 FBXO31Q5XUX0 539 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC9-203ENST00000517667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■■■ 42.3
TRAPPC9-203ENST00000517667 MIA2Q96PC5 1412 aa18.5■□□□□ 0.55
TRAPPC9-203ENST00000517667 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
TRAPPC9-203ENST00000517667 CAMSAP2Q08AD1 1489 aa18.5■□□□□ 0.55
TRAPPC9-203ENST00000517667 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-203ENST00000517667 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-203ENST00000517667 SYNMO15061 1565 aa18.49■□□□□ 0.55
TRAPPC9-203ENST00000517667 ARHGEF5Q12774 1597 aa18.48■□□□□ 0.55
TRAPPC9-203ENST00000517667 RNF17Q9BXT8 1623 aaKnown RBP18.47■□□□□ 0.55
TRAPPC9-203ENST00000517667 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
TRAPPC9-203ENST00000517667 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC9-203ENST00000517667 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
TRAPPC9-203ENST00000517667 STRCP1A6NGW2 1772 aa18.43■□□□□ 0.54
TRAPPC9-203ENST00000517667 EIF2AK4Q9P2K8 1649 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-203ENST00000517667 ABCC3O15438 1527 aa18.41■□□□□ 0.54
TRAPPC9-203ENST00000517667 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
TRAPPC9-203ENST00000517667 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
TRAPPC9-203ENST00000517667 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
TRAPPC9-203ENST00000517667 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
TRAPPC9-203ENST00000517667 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
TRAPPC9-203ENST00000517667 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
TRAPPC9-203ENST00000517667 CEP152O94986 1710 aa18.35■□□□□ 0.53
TRAPPC9-203ENST00000517667 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
TRAPPC9-203ENST00000517667 SCAF11Q99590 1463 aaKnown RBP18.33■□□□□ 0.53
TRAPPC9-203ENST00000517667 SLIT1O75093 1534 aa18.31■□□□□ 0.52
TRAPPC9-203ENST00000517667 XIRP1Q702N8 1843 aaKnown RBP18.3■□□□□ 0.52
TRAPPC9-203ENST00000517667 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
TRAPPC9-203ENST00000517667 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
TRAPPC9-203ENST00000517667 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
TRAPPC9-203ENST00000517667 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
TRAPPC9-203ENST00000517667 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC9-203ENST00000517667 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC9-203ENST00000517667 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-203ENST00000517667 ARHGAP31Q2M1Z3 1444 aa18.25■□□□□ 0.51
TRAPPC9-203ENST00000517667 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
TRAPPC9-203ENST00000517667 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
TRAPPC9-203ENST00000517667 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
TRAPPC9-203ENST00000517667 EID1Q9Y6B2 187 aa18.23■□□□□ 0.51
TRAPPC9-203ENST00000517667 CROCC2H7BZ55 1655 aa18.22■□□□□ 0.51
TRAPPC9-203ENST00000517667 LTKP29376 864 aa18.22■□□□□ 0.51
TRAPPC9-203ENST00000517667 FAM135BQ49AJ0 1406 aa18.22■□□□□ 0.51
TRAPPC9-203ENST00000517667 ERBINQ96RT1 1412 aa18.22■□□□□ 0.51
TRAPPC9-203ENST00000517667 MAP3K1Q13233 1512 aa18.2■□□□□ 0.5
TRAPPC9-203ENST00000517667 RGS17Q9UGC6 210 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC9-203ENST00000517667 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
TRAPPC9-203ENST00000517667 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
TRAPPC9-203ENST00000517667 TMEM2Q9UHN6 1383 aa18.18■□□□□ 0.5
TRAPPC9-203ENST00000517667 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
TRAPPC9-203ENST00000517667 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
TRAPPC9-203ENST00000517667 KANK1Q14678 1352 aa18.16■□□□□ 0.5
TRAPPC9-203ENST00000517667 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
TRAPPC9-203ENST00000517667 TMEM94Q12767 1356 aa18.15■□□□□ 0.5
TRAPPC9-203ENST00000517667 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.49
TRAPPC9-203ENST00000517667 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
TRAPPC9-203ENST00000517667 LMTK2Q8IWU2 1503 aa18.13■□□□□ 0.49
TRAPPC9-203ENST00000517667 TET3O43151 1660 aa18.12■□□□□ 0.49
TRAPPC9-203ENST00000517667 KCNA6P17658 529 aa18.12■□□□□ 0.49
TRAPPC9-203ENST00000517667 PTPN23Q9H3S7 1636 aa18.12■□□□□ 0.49
TRAPPC9-203ENST00000517667 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
TRAPPC9-203ENST00000517667 ABCC5O15440 1437 aa18.1■□□□□ 0.49
TRAPPC9-203ENST00000517667 KANK4Q5T7N3 995 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-203ENST00000517667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC9-203ENST00000517667 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
TRAPPC9-203ENST00000517667 POTEAQ6S8J7 498 aa18.08■□□□□ 0.48
TRAPPC9-203ENST00000517667 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-203ENST00000517667 RRP7BPQ9NSQ0 103 aa18.08■□□□□ 0.48
TRAPPC9-203ENST00000517667 DAPK1P53355 1430 aa18.07■□□□□ 0.48
TRAPPC9-203ENST00000517667 MSH6P52701 1360 aa18.06■□□□□ 0.48
TRAPPC9-203ENST00000517667 IDI1Q13907 227 aa18.06■□□□□ 0.48
TRAPPC9-203ENST00000517667 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
TRAPPC9-203ENST00000517667 SETD1AO15047 1707 aaKnown RBP18.05■□□□□ 0.48
TRAPPC9-203ENST00000517667 NOS1P29475 1434 aa18.05■□□□□ 0.48
TRAPPC9-203ENST00000517667 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
TRAPPC9-203ENST00000517667 CHD2O14647 1828 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-203ENST00000517667 JCADQ9P266 1359 aa18.03■□□□□ 0.48
TRAPPC9-203ENST00000517667 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms