RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CAMSAP2Q08AD1 1489 aa24.34■■□□□ 1.49
CSGALNACT1-204ENST00000517494 FBXO31Q5XUX0 539 aaPredicted RBP24.33■■□□□ 1.49
CSGALNACT1-204ENST00000517494 TNRQ92752 1358 aa24.32■■□□□ 1.48
CSGALNACT1-204ENST00000517494 WASHC2CQ9Y4E1 1318 aa24.31■■□□□ 1.48
CSGALNACT1-204ENST00000517494 SOCS7O14512 581 aa24.3■■□□□ 1.48
CSGALNACT1-204ENST00000517494 KDM5DQ9BY66 1539 aa24.29■■□□□ 1.48
CSGALNACT1-204ENST00000517494 DNMT1P26358 1616 aaKnown RBP24.28■■□□□ 1.48
CSGALNACT1-204ENST00000517494 RSPH4AQ5TD94 716 aa24.27■■□□□ 1.48
CSGALNACT1-204ENST00000517494 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
CSGALNACT1-204ENST00000517494 PZPP20742 1482 aa24.26■■□□□ 1.47
CSGALNACT1-204ENST00000517494 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
CSGALNACT1-204ENST00000517494 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
CSGALNACT1-204ENST00000517494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.21■■□□□ 1.47
CSGALNACT1-204ENST00000517494 FAM135AQ9P2D6 1515 aa24.2■■□□□ 1.47
CSGALNACT1-204ENST00000517494 PIP4K2BP78356 416 aa24.2■■□□□ 1.46
CSGALNACT1-204ENST00000517494 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
CSGALNACT1-204ENST00000517494 ARHGEF5Q12774 1597 aa24.19■■□□□ 1.46
CSGALNACT1-204ENST00000517494 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
CSGALNACT1-204ENST00000517494 NEURL4Q96JN8 1562 aa24.18■■□□□ 1.46
CSGALNACT1-204ENST00000517494 THEMISQ8N1K5 641 aaPredicted RBP24.18■■□□□ 1.46
CSGALNACT1-204ENST00000517494 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
CSGALNACT1-204ENST00000517494 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
CSGALNACT1-204ENST00000517494 LRRC9Q6ZRR7 1453 aa24.15■■□□□ 1.46
CSGALNACT1-204ENST00000517494 SHANK2Q9UPX8 1470 aa24.15■■□□□ 1.46
CSGALNACT1-204ENST00000517494 UGGT1Q9NYU2 1555 aa24.15■■□□□ 1.46
CSGALNACT1-204ENST00000517494 CPS1P31327 1500 aa24.15■■□□□ 1.46
CSGALNACT1-204ENST00000517494 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
CSGALNACT1-204ENST00000517494 TOM1O60784 492 aa24.13■■□□□ 1.45
CSGALNACT1-204ENST00000517494 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
CSGALNACT1-204ENST00000517494 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
CSGALNACT1-204ENST00000517494 HSPA1LP34931 641 aa24.12■■□□□ 1.45
CSGALNACT1-204ENST00000517494 ABCC3O15438 1527 aa24.1■■□□□ 1.45
CSGALNACT1-204ENST00000517494 KANK4Q5T7N3 995 aaPredicted RBP24.09■■□□□ 1.45
CSGALNACT1-204ENST00000517494 RNF17Q9BXT8 1623 aaKnown RBP24.07■■□□□ 1.44
CSGALNACT1-204ENST00000517494 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
CSGALNACT1-204ENST00000517494 MAST1Q9Y2H9 1570 aa24.06■■□□□ 1.44
CSGALNACT1-204ENST00000517494 MYOM3Q5VTT5 1437 aa24.04■■□□□ 1.44
CSGALNACT1-204ENST00000517494 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
CSGALNACT1-204ENST00000517494 ERVK-7P63135 1459 aa24.04■■□□□ 1.44
CSGALNACT1-204ENST00000517494 ZC3H13Q5T200 1668 aaKnown RBP24.03■■□□□ 1.44
CSGALNACT1-204ENST00000517494 MED14O60244 1454 aa24.03■■□□□ 1.44
CSGALNACT1-204ENST00000517494 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
CSGALNACT1-204ENST00000517494 EIF2AK4Q9P2K8 1649 aaKnown RBP24.02■■□□□ 1.44
CSGALNACT1-204ENST00000517494 IQGAP1P46940 1657 aa24.02■■□□□ 1.44
CSGALNACT1-204ENST00000517494 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
CSGALNACT1-204ENST00000517494 DUOX2Q9NRD8 1548 aa23.98■■□□□ 1.43
CSGALNACT1-204ENST00000517494 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
CSGALNACT1-204ENST00000517494 CEP152O94986 1710 aa23.97■■□□□ 1.43
CSGALNACT1-204ENST00000517494 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
CSGALNACT1-204ENST00000517494 KIF15Q9NS87 1388 aa23.97■■□□□ 1.43
CSGALNACT1-204ENST00000517494 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
CSGALNACT1-204ENST00000517494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.43
CSGALNACT1-204ENST00000517494 APLP2Q06481 763 aa23.94■■□□□ 1.42
CSGALNACT1-204ENST00000517494 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
CSGALNACT1-204ENST00000517494 LRRC7Q96NW7 1537 aa23.93■■□□□ 1.42
CSGALNACT1-204ENST00000517494 SCAF11Q99590 1463 aaKnown RBP23.93■■□□□ 1.42
CSGALNACT1-204ENST00000517494 TXNDC2Q86VQ3 553 aa23.91■■□□□ 1.42
CSGALNACT1-204ENST00000517494 ABCC5O15440 1437 aa23.91■■□□□ 1.42
CSGALNACT1-204ENST00000517494 ALKQ9UM73 1620 aa23.91■■□□□ 1.42
CSGALNACT1-204ENST00000517494 ERBINQ96RT1 1412 aa23.9■■□□□ 1.42
CSGALNACT1-204ENST00000517494 UBR1Q8IWV7 1749 aa23.9■■□□□ 1.42
CSGALNACT1-204ENST00000517494 LTKP29376 864 aa23.89■■□□□ 1.41
CSGALNACT1-204ENST00000517494 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
CSGALNACT1-204ENST00000517494 CFAP65Q6ZU64 1925 aaKnown RBP23.88■■□□□ 1.41
CSGALNACT1-204ENST00000517494 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
CSGALNACT1-204ENST00000517494 SYNMO15061 1565 aa23.88■■□□□ 1.41
CSGALNACT1-204ENST00000517494 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
CSGALNACT1-204ENST00000517494 PRDM15P57071 1507 aaPredicted RBP23.88■■□□□ 1.41
CSGALNACT1-204ENST00000517494 KANK1Q14678 1352 aa23.87■■□□□ 1.41
CSGALNACT1-204ENST00000517494 PTPN23Q9H3S7 1636 aa23.87■■□□□ 1.41
CSGALNACT1-204ENST00000517494 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
CSGALNACT1-204ENST00000517494 DAPK1P53355 1430 aa23.85■■□□□ 1.41
CSGALNACT1-204ENST00000517494 ARHGAP31Q2M1Z3 1444 aa23.85■■□□□ 1.41
CSGALNACT1-204ENST00000517494 CROCC2H7BZ55 1655 aa23.85■■□□□ 1.41
CSGALNACT1-204ENST00000517494 ARHGAP23Q9P227 1491 aa23.83■■□□□ 1.41
CSGALNACT1-204ENST00000517494 SLIT1O75093 1534 aa23.83■■□□□ 1.41
CSGALNACT1-204ENST00000517494 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
CSGALNACT1-204ENST00000517494 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
CSGALNACT1-204ENST00000517494 ANKRD30AQ9BXX3 1397 aa23.79■■□□□ 1.4
CSGALNACT1-204ENST00000517494 TMEM2Q9UHN6 1383 aa23.79■■□□□ 1.4
CSGALNACT1-204ENST00000517494 EFCAB6Q5THR3 1501 aa23.75■■□□□ 1.39
CSGALNACT1-204ENST00000517494 IDI1Q13907 227 aa23.75■■□□□ 1.39
CSGALNACT1-204ENST00000517494 BCANQ96GW7 911 aa23.73■■□□□ 1.39
CSGALNACT1-204ENST00000517494 SLC26A8Q96RN1 970 aa23.72■■□□□ 1.39
CSGALNACT1-204ENST00000517494 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
CSGALNACT1-204ENST00000517494 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
CSGALNACT1-204ENST00000517494 LMTK2Q8IWU2 1503 aa23.7■■□□□ 1.38
CSGALNACT1-204ENST00000517494 RBM33Q96EV2 1170 aaKnown RBP23.7■■□□□ 1.38
CSGALNACT1-204ENST00000517494 PROSER2Q86WR7 435 aaPredicted RBP23.68■■□□□ 1.38
CSGALNACT1-204ENST00000517494 KCNA6P17658 529 aa23.67■■□□□ 1.38
CSGALNACT1-204ENST00000517494 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
CSGALNACT1-204ENST00000517494 ADGRB3O60242 1522 aa23.65■■□□□ 1.38
CSGALNACT1-204ENST00000517494 NOS1P29475 1434 aa23.65■■□□□ 1.38
CSGALNACT1-204ENST00000517494 FAM135BQ49AJ0 1406 aa23.63■■□□□ 1.37
CSGALNACT1-204ENST00000517494 SLC52A1Q9NWF4 448 aa23.63■■□□□ 1.37
CSGALNACT1-204ENST00000517494 KDM5AP29375 1690 aaKnown RBP23.63■■□□□ 1.37
CSGALNACT1-204ENST00000517494 ADGRL2O95490 1459 aa23.62■■□□□ 1.37
CSGALNACT1-204ENST00000517494 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
CSGALNACT1-204ENST00000517494 ANKRD50Q9ULJ7 1429 aa23.6■■□□□ 1.37
CSGALNACT1-204ENST00000517494 TET3O43151 1660 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms