RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 TYW1BQ6NUM6 668 aa9.94□□□□□ -0.82
MATR3-226ENST00000515833 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
MATR3-226ENST00000515833 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
MATR3-226ENST00000515833 PHF14O94880 888 aa9.92□□□□□ -0.82
MATR3-226ENST00000515833 ITGBL1O95965 494 aaPredicted RBP9.91□□□□□ -0.82
MATR3-226ENST00000515833 KIAA1468Q9P260 1216 aa9.91□□□□□ -0.82
MATR3-226ENST00000515833 SOWAHBA6NEL2 793 aa9.9□□□□□ -0.82
MATR3-226ENST00000515833 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
MATR3-226ENST00000515833 ZFRQ96KR1 1074 aaKnown RBP9.89□□□□□ -0.83
MATR3-226ENST00000515833 DCAF8L2P0C7V8 631 aa9.88□□□□□ -0.83
MATR3-226ENST00000515833 C6orf132Q5T0Z8 1188 aa9.87□□□□□ -0.83
MATR3-226ENST00000515833 WBP1LQ9NX94 342 aa9.87□□□□□ -0.83
MATR3-226ENST00000515833 SEPT9Q9UHD8 586 aaPredicted RBP9.87□□□□□ -0.83
MATR3-226ENST00000515833 EPAS1Q99814 870 aa9.86□□□□□ -0.83
MATR3-226ENST00000515833 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
MATR3-226ENST00000515833 DPYSL4O14531 572 aa9.84□□□□□ -0.83
MATR3-226ENST00000515833 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
MATR3-226ENST00000515833 TRIM6-TRIM34B2RNG4 842 aa9.83□□□□□ -0.84
MATR3-226ENST00000515833 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
MATR3-226ENST00000515833 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
MATR3-226ENST00000515833 KCNC4Q03721 635 aa9.82□□□□□ -0.84
MATR3-226ENST00000515833 FAM98CQ17RN3 349 aaKnown RBP9.8□□□□□ -0.84
MATR3-226ENST00000515833 DDX12PQ92771 950 aa9.8□□□□□ -0.84
MATR3-226ENST00000515833 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
MATR3-226ENST00000515833 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
MATR3-226ENST00000515833 Q6ZNB5 142 aa9.78□□□□□ -0.84
MATR3-226ENST00000515833 TSR3Q9UJK0 312 aaKnown RBP9.78□□□□□ -0.84
MATR3-226ENST00000515833 LRCH3Q96II8 777 aa9.77□□□□□ -0.85
MATR3-226ENST00000515833 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
MATR3-226ENST00000515833 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
MATR3-226ENST00000515833 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
MATR3-226ENST00000515833 MAP3K7O43318 606 aa9.72□□□□□ -0.85
MATR3-226ENST00000515833 EN1Q05925 392 aaPredicted RBP9.72□□□□□ -0.85
MATR3-226ENST00000515833 NBR1Q14596 966 aa9.72□□□□□ -0.85
MATR3-226ENST00000515833 PPP4CP60510 307 aa9.7□□□□□ -0.86
MATR3-226ENST00000515833 SMAPO00193 183 aa9.69□□□□□ -0.86
MATR3-226ENST00000515833 PDIA6Q15084 440 aa9.67□□□□□ -0.86
MATR3-226ENST00000515833 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
MATR3-226ENST00000515833 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
MATR3-226ENST00000515833 FAM198AQ9UFP1 575 aa9.67□□□□□ -0.86
MATR3-226ENST00000515833 CDCA7LQ96GN5 454 aa9.66□□□□□ -0.86
MATR3-226ENST00000515833 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
MATR3-226ENST00000515833 LCE2BO14633 110 aa9.65□□□□□ -0.86
MATR3-226ENST00000515833 GFRA3O60609 400 aa9.65□□□□□ -0.86
MATR3-226ENST00000515833 PRSS12P56730 875 aa9.65□□□□□ -0.86
MATR3-226ENST00000515833 LAPTM4AQ15012 233 aa9.65□□□□□ -0.86
MATR3-226ENST00000515833 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
MATR3-226ENST00000515833 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
MATR3-226ENST00000515833 PRKD2Q9BZL6 878 aa9.63□□□□□ -0.87
MATR3-226ENST00000515833 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
MATR3-226ENST00000515833 TATDN2Q93075 761 aa9.62□□□□□ -0.87
MATR3-226ENST00000515833 MTRQ99707 1265 aa9.62□□□□□ -0.87
MATR3-226ENST00000515833 PNMA3Q9UL41 463 aa9.61□□□□□ -0.87
MATR3-226ENST00000515833 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
MATR3-226ENST00000515833 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
MATR3-226ENST00000515833 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
MATR3-226ENST00000515833 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
MATR3-226ENST00000515833 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
MATR3-226ENST00000515833 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
MATR3-226ENST00000515833 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
MATR3-226ENST00000515833 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
MATR3-226ENST00000515833 E2F4Q16254 413 aa9.57□□□□□ -0.88
MATR3-226ENST00000515833 CDHR5Q9HBB8 845 aa9.57□□□□□ -0.88
MATR3-226ENST00000515833 RNF40O75150 1001 aa9.56□□□□□ -0.88
MATR3-226ENST00000515833 NUDT18Q6ZVK8 323 aa9.56□□□□□ -0.88
MATR3-226ENST00000515833 NRG2O14511 850 aaPredicted RBP9.55□□□□□ -0.88
MATR3-226ENST00000515833 APLP1P51693 650 aa9.55□□□□□ -0.88
MATR3-226ENST00000515833 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
MATR3-226ENST00000515833 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
MATR3-226ENST00000515833 OSBPP22059 807 aa9.54□□□□□ -0.88
MATR3-226ENST00000515833 HDGFP51858 240 aaKnown RBP9.54□□□□□ -0.88
MATR3-226ENST00000515833 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
MATR3-226ENST00000515833 SPRYD3Q8NCJ5 442 aa9.53□□□□□ -0.88
MATR3-226ENST00000515833 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
MATR3-226ENST00000515833 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
MATR3-226ENST00000515833 SWT1Q5T5J6 900 aaKnown RBP9.49□□□□□ -0.89
MATR3-226ENST00000515833 RTN4Q9NQC3 1192 aaKnown RBP9.49□□□□□ -0.89
MATR3-226ENST00000515833 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
MATR3-226ENST00000515833 COPS2P61201 443 aa9.48□□□□□ -0.89
MATR3-226ENST00000515833 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
MATR3-226ENST00000515833 PADI6Q6TGC4 694 aa9.47□□□□□ -0.89
MATR3-226ENST00000515833 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
MATR3-226ENST00000515833 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
MATR3-226ENST00000515833 PDZRN3Q9UPQ7 1066 aa9.47□□□□□ -0.89
MATR3-226ENST00000515833 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
MATR3-226ENST00000515833 GGCXP38435 758 aa9.44□□□□□ -0.9
MATR3-226ENST00000515833 ZNF787Q6DD87 383 aa9.44□□□□□ -0.9
MATR3-226ENST00000515833 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
MATR3-226ENST00000515833 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.44□□□□□ -0.9
MATR3-226ENST00000515833 ZPR1O75312 459 aa9.43□□□□□ -0.9
MATR3-226ENST00000515833 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
MATR3-226ENST00000515833 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
MATR3-226ENST00000515833 EYA1Q99502 592 aa9.41□□□□□ -0.9
MATR3-226ENST00000515833 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
MATR3-226ENST00000515833 PCDHB3Q9Y5E6 796 aa9.39□□□□□ -0.91
MATR3-226ENST00000515833 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
MATR3-226ENST00000515833 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
MATR3-226ENST00000515833 TRIM67Q6ZTA4 783 aa9.37□□□□□ -0.91
MATR3-226ENST00000515833 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
MATR3-226ENST00000515833 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms