RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
SH3TC1-225ENST00000515682 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
SH3TC1-225ENST00000515682 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
SH3TC1-225ENST00000515682 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
SH3TC1-225ENST00000515682 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
SH3TC1-225ENST00000515682 EFCAB5A4FU69 1503 aa17.52■□□□□ 0.4
SH3TC1-225ENST00000515682 CCDC146Q8IYE0 955 aa17.52■□□□□ 0.4
SH3TC1-225ENST00000515682 TMF1P82094 1093 aa17.51■□□□□ 0.39
SH3TC1-225ENST00000515682 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
SH3TC1-225ENST00000515682 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
SH3TC1-225ENST00000515682 PANK3Q9H999 370 aa17.49■□□□□ 0.39
SH3TC1-225ENST00000515682 TRIM44Q96DX7 344 aaPredicted RBP17.49■□□□□ 0.39
SH3TC1-225ENST00000515682 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
SH3TC1-225ENST00000515682 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
SH3TC1-225ENST00000515682 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
SH3TC1-225ENST00000515682 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
SH3TC1-225ENST00000515682 PTPN23Q9H3S7 1636 aa17.46■□□□□ 0.39
SH3TC1-225ENST00000515682 L1TD1Q5T7N2 865 aaKnown RBP17.46■□□□□ 0.39
SH3TC1-225ENST00000515682 FAM69CQ0P6D2 419 aa17.45■□□□□ 0.38
SH3TC1-225ENST00000515682 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
SH3TC1-225ENST00000515682 GRIN2AQ12879 1464 aa17.45■□□□□ 0.38
SH3TC1-225ENST00000515682 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
SH3TC1-225ENST00000515682 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
SH3TC1-225ENST00000515682 PNNQ9H307 717 aaKnown RBP17.44■□□□□ 0.38
SH3TC1-225ENST00000515682 MAGI1Q96QZ7 1491 aaPredicted RBP17.43■□□□□ 0.38
SH3TC1-225ENST00000515682 POGKQ9P215 609 aa17.43■□□□□ 0.38
SH3TC1-225ENST00000515682 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
SH3TC1-225ENST00000515682 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
SH3TC1-225ENST00000515682 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
SH3TC1-225ENST00000515682 CUL7Q14999 1698 aa17.42■□□□□ 0.38
SH3TC1-225ENST00000515682 C20orf194Q5TEA3 1177 aa17.41■□□□□ 0.38
SH3TC1-225ENST00000515682 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
SH3TC1-225ENST00000515682 C14orf37Q86TY3 774 aa17.4■□□□□ 0.38
SH3TC1-225ENST00000515682 CLUAP1Q96AJ1 413 aa17.4■□□□□ 0.38
SH3TC1-225ENST00000515682 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.37
SH3TC1-225ENST00000515682 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
SH3TC1-225ENST00000515682 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
SH3TC1-225ENST00000515682 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
SH3TC1-225ENST00000515682 GOLGA6L3A6NEY3 463 aa17.38■□□□□ 0.37
SH3TC1-225ENST00000515682 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
SH3TC1-225ENST00000515682 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
SH3TC1-225ENST00000515682 APAF1O14727 1248 aa17.35■□□□□ 0.37
SH3TC1-225ENST00000515682 PLB1Q6P1J6 1458 aa17.35■□□□□ 0.37
SH3TC1-225ENST00000515682 CDK13Q14004 1512 aaKnown RBP17.35■□□□□ 0.37
SH3TC1-225ENST00000515682 BCL2L13Q9BXK5 485 aa17.35■□□□□ 0.37
SH3TC1-225ENST00000515682 STK26Q9P289 416 aa17.35■□□□□ 0.37
SH3TC1-225ENST00000515682 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
SH3TC1-225ENST00000515682 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
SH3TC1-225ENST00000515682 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
SH3TC1-225ENST00000515682 NBPF1Q3BBV0 1214 aa17.34■□□□□ 0.37
SH3TC1-225ENST00000515682 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.37
SH3TC1-225ENST00000515682 EHBP1L1Q8N3D4 1523 aa17.33■□□□□ 0.36
SH3TC1-225ENST00000515682 HDGFP51858 240 aaKnown RBP17.32■□□□□ 0.36
SH3TC1-225ENST00000515682 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
SH3TC1-225ENST00000515682 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
SH3TC1-225ENST00000515682 ANKRD50Q9ULJ7 1429 aa17.31■□□□□ 0.36
SH3TC1-225ENST00000515682 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
SH3TC1-225ENST00000515682 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
SH3TC1-225ENST00000515682 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-225ENST00000515682 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
SH3TC1-225ENST00000515682 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
SH3TC1-225ENST00000515682 HSP90AB1P08238 724 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-225ENST00000515682 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
SH3TC1-225ENST00000515682 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
SH3TC1-225ENST00000515682 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
SH3TC1-225ENST00000515682 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
SH3TC1-225ENST00000515682 BCAR3O75815 825 aa17.27■□□□□ 0.36
SH3TC1-225ENST00000515682 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.35
SH3TC1-225ENST00000515682 DAPK1P53355 1430 aa17.27■□□□□ 0.35
SH3TC1-225ENST00000515682 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.35
SH3TC1-225ENST00000515682 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
SH3TC1-225ENST00000515682 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
SH3TC1-225ENST00000515682 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
SH3TC1-225ENST00000515682 FAM43AQ8N2R8 423 aa17.26■□□□□ 0.35
SH3TC1-225ENST00000515682 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
SH3TC1-225ENST00000515682 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
SH3TC1-225ENST00000515682 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
SH3TC1-225ENST00000515682 GOLGA6L22H0YM25 854 aa17.25■□□□□ 0.35
SH3TC1-225ENST00000515682 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
SH3TC1-225ENST00000515682 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
SH3TC1-225ENST00000515682 ARID3AQ99856 593 aa17.24■□□□□ 0.35
SH3TC1-225ENST00000515682 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
SH3TC1-225ENST00000515682 CFAP43Q8NDM7 1665 aa17.23■□□□□ 0.35
SH3TC1-225ENST00000515682 PMFBP1Q8TBY8 1022 aa17.23■□□□□ 0.35
SH3TC1-225ENST00000515682 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
SH3TC1-225ENST00000515682 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
SH3TC1-225ENST00000515682 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
SH3TC1-225ENST00000515682 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-225ENST00000515682 E9PSI1 815 aa17.21■□□□□ 0.34
SH3TC1-225ENST00000515682 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
SH3TC1-225ENST00000515682 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
SH3TC1-225ENST00000515682 ABCC5O15440 1437 aa17.19■□□□□ 0.34
SH3TC1-225ENST00000515682 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
SH3TC1-225ENST00000515682 ITPRIPQ8IWB1 547 aa17.19■□□□□ 0.34
SH3TC1-225ENST00000515682 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
SH3TC1-225ENST00000515682 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
SH3TC1-225ENST00000515682 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
SH3TC1-225ENST00000515682 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
SH3TC1-225ENST00000515682 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
SH3TC1-225ENST00000515682 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms