RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
PHF3-212ENST00000515594 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
PHF3-212ENST00000515594 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
PHF3-212ENST00000515594 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
PHF3-212ENST00000515594 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
PHF3-212ENST00000515594 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
PHF3-212ENST00000515594 LAS1LQ9Y4W2 734 aaKnown RBP17.27■□□□□ 0.36
PHF3-212ENST00000515594 ZBTB47Q9UFB7 747 aaPredicted RBP17.27■□□□□ 0.36
PHF3-212ENST00000515594 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
PHF3-212ENST00000515594 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
PHF3-212ENST00000515594 ATP10BO94823 1461 aa17.22■□□□□ 0.35
PHF3-212ENST00000515594 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
PHF3-212ENST00000515594 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
PHF3-212ENST00000515594 RALBP1Q15311 655 aa17.22■□□□□ 0.35
PHF3-212ENST00000515594 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
PHF3-212ENST00000515594 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
PHF3-212ENST00000515594 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
PHF3-212ENST00000515594 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
PHF3-212ENST00000515594 ADCY10Q96PN6 1610 aa17.2■□□□□ 0.34
PHF3-212ENST00000515594 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
PHF3-212ENST00000515594 PDE4AP27815 886 aa17.19■□□□□ 0.34
PHF3-212ENST00000515594 PANK3Q9H999 370 aa17.19■□□□□ 0.34
PHF3-212ENST00000515594 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
PHF3-212ENST00000515594 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
PHF3-212ENST00000515594 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
PHF3-212ENST00000515594 E9PCH4 1651 aa17.17■□□□□ 0.34
PHF3-212ENST00000515594 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
PHF3-212ENST00000515594 KDM5DQ9BY66 1539 aa17.16■□□□□ 0.34
PHF3-212ENST00000515594 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
PHF3-212ENST00000515594 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
PHF3-212ENST00000515594 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
PHF3-212ENST00000515594 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
PHF3-212ENST00000515594 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
PHF3-212ENST00000515594 PRAG1Q86YV5 1406 aa17.15■□□□□ 0.34
PHF3-212ENST00000515594 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
PHF3-212ENST00000515594 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
PHF3-212ENST00000515594 TESK2Q96S53 571 aa17.14■□□□□ 0.33
PHF3-212ENST00000515594 ABCA8O94911 1581 aa17.13■□□□□ 0.33
PHF3-212ENST00000515594 PLA2R1Q13018 1463 aa17.13■□□□□ 0.33
PHF3-212ENST00000515594 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
PHF3-212ENST00000515594 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
PHF3-212ENST00000515594 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
PHF3-212ENST00000515594 A2MP01023 1474 aa17.12■□□□□ 0.33
PHF3-212ENST00000515594 TRPM1Q7Z4N2 1603 aa17.12■□□□□ 0.33
PHF3-212ENST00000515594 PTPRGP23470 1445 aa17.11■□□□□ 0.33
PHF3-212ENST00000515594 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
PHF3-212ENST00000515594 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
PHF3-212ENST00000515594 NEFMP07197 916 aa17.1■□□□□ 0.33
PHF3-212ENST00000515594 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
PHF3-212ENST00000515594 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
PHF3-212ENST00000515594 SYCP2Q9BX26 1530 aa17.08■□□□□ 0.33
PHF3-212ENST00000515594 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
PHF3-212ENST00000515594 CDC42BPBQ9Y5S2 1711 aa17.08■□□□□ 0.32
PHF3-212ENST00000515594 NUP160Q12769 1436 aa17.07■□□□□ 0.32
PHF3-212ENST00000515594 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
PHF3-212ENST00000515594 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
PHF3-212ENST00000515594 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
PHF3-212ENST00000515594 COL17A1Q9UMD9 1497 aaPredicted RBP17.06■□□□□ 0.32
PHF3-212ENST00000515594 ERBINQ96RT1 1412 aa17.05■□□□□ 0.32
PHF3-212ENST00000515594 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
PHF3-212ENST00000515594 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
PHF3-212ENST00000515594 TMF1P82094 1093 aa17.02■□□□□ 0.32
PHF3-212ENST00000515594 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
PHF3-212ENST00000515594 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.31
PHF3-212ENST00000515594 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
PHF3-212ENST00000515594 RGS3P49796 1198 aa17■□□□□ 0.31
PHF3-212ENST00000515594 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
PHF3-212ENST00000515594 BLMP54132 1417 aaPredicted RBP17■□□□□ 0.31
PHF3-212ENST00000515594 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
PHF3-212ENST00000515594 PPP2R1AP30153 589 aa16.99■□□□□ 0.31
PHF3-212ENST00000515594 ARHGEF5Q12774 1597 aa16.99■□□□□ 0.31
PHF3-212ENST00000515594 PRDM15P57071 1507 aaPredicted RBP16.98■□□□□ 0.31
PHF3-212ENST00000515594 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
PHF3-212ENST00000515594 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
PHF3-212ENST00000515594 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
PHF3-212ENST00000515594 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
PHF3-212ENST00000515594 PREX2Q70Z35 1606 aa16.97■□□□□ 0.31
PHF3-212ENST00000515594 MS4A1P11836 297 aa16.95■□□□□ 0.3
PHF3-212ENST00000515594 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
PHF3-212ENST00000515594 ZMYM4Q5VZL5 1548 aa16.94■□□□□ 0.3
PHF3-212ENST00000515594 BCAR3O75815 825 aa16.94■□□□□ 0.3
PHF3-212ENST00000515594 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
PHF3-212ENST00000515594 WDR7Q9Y4E6 1490 aa16.93■□□□□ 0.3
PHF3-212ENST00000515594 KDM2BQ8NHM5 1336 aa16.93■□□□□ 0.3
PHF3-212ENST00000515594 APAF1O14727 1248 aa16.93■□□□□ 0.3
PHF3-212ENST00000515594 ANO8Q9HCE9 1232 aaPredicted RBP16.93■□□□□ 0.3
PHF3-212ENST00000515594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
PHF3-212ENST00000515594 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
PHF3-212ENST00000515594 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
PHF3-212ENST00000515594 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
PHF3-212ENST00000515594 UNC13BO14795 1591 aa16.9■□□□□ 0.3
PHF3-212ENST00000515594 TNNT2P45379 298 aaPredicted RBP16.89■□□□□ 0.29
PHF3-212ENST00000515594 C8orf34Q49A92 452 aa16.89■□□□□ 0.29
PHF3-212ENST00000515594 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
PHF3-212ENST00000515594 NEUROD2Q15784 382 aa16.88■□□□□ 0.29
PHF3-212ENST00000515594 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
PHF3-212ENST00000515594 NFKBIBQ15653 356 aa16.88■□□□□ 0.29
PHF3-212ENST00000515594 RSPH4AQ5TD94 716 aa16.87■□□□□ 0.29
PHF3-212ENST00000515594 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
PHF3-212ENST00000515594 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms