RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 SEMA3EO15041 775 aa11.7□□□□□ -0.54
PHF3-211ENST00000514822 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
PHF3-211ENST00000514822 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
PHF3-211ENST00000514822 MAP3K7O43318 606 aa11.69□□□□□ -0.54
PHF3-211ENST00000514822 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
PHF3-211ENST00000514822 OSBPP22059 807 aa11.68□□□□□ -0.54
PHF3-211ENST00000514822 C6orf132Q5T0Z8 1188 aa11.68□□□□□ -0.54
PHF3-211ENST00000514822 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
PHF3-211ENST00000514822 TK2O00142 265 aa11.65□□□□□ -0.54
PHF3-211ENST00000514822 TESPA1A2RU30 521 aaPredicted RBP11.64□□□□□ -0.55
PHF3-211ENST00000514822 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
PHF3-211ENST00000514822 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
PHF3-211ENST00000514822 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
PHF3-211ENST00000514822 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
PHF3-211ENST00000514822 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
PHF3-211ENST00000514822 SLC4A5Q9BY07 1137 aa11.63□□□□□ -0.55
PHF3-211ENST00000514822 COL9A1P20849 921 aa11.62□□□□□ -0.55
PHF3-211ENST00000514822 ZBED2Q9BTP6 218 aa11.61□□□□□ -0.55
PHF3-211ENST00000514822 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
PHF3-211ENST00000514822 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
PHF3-211ENST00000514822 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
PHF3-211ENST00000514822 CDHR5Q9HBB8 845 aa11.58□□□□□ -0.56
PHF3-211ENST00000514822 HRO43593 1189 aa11.56□□□□□ -0.56
PHF3-211ENST00000514822 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
PHF3-211ENST00000514822 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
PHF3-211ENST00000514822 PROX2Q3B8N5 592 aa11.55□□□□□ -0.56
PHF3-211ENST00000514822 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
PHF3-211ENST00000514822 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
PHF3-211ENST00000514822 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
PHF3-211ENST00000514822 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
PHF3-211ENST00000514822 RABGEF1Q9UJ41 708 aa11.53□□□□□ -0.56
PHF3-211ENST00000514822 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
PHF3-211ENST00000514822 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
PHF3-211ENST00000514822 NBPF3Q9H094 633 aa11.52□□□□□ -0.57
PHF3-211ENST00000514822 PRSS12P56730 875 aa11.51□□□□□ -0.57
PHF3-211ENST00000514822 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
PHF3-211ENST00000514822 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
PHF3-211ENST00000514822 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
PHF3-211ENST00000514822 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
PHF3-211ENST00000514822 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
PHF3-211ENST00000514822 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
PHF3-211ENST00000514822 PTGDRQ13258 359 aa11.48□□□□□ -0.57
PHF3-211ENST00000514822 PACS2Q86VP3 889 aa11.48□□□□□ -0.57
PHF3-211ENST00000514822 RNF166Q96A37 237 aaPredicted RBP11.48□□□□□ -0.57
PHF3-211ENST00000514822 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
PHF3-211ENST00000514822 FCHSD2O94868 740 aa11.46□□□□□ -0.57
PHF3-211ENST00000514822 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
PHF3-211ENST00000514822 GOLGA8CPA6NN73 597 aa11.44□□□□□ -0.58
PHF3-211ENST00000514822 LAPTM4BQ86VI4 370 aa11.43□□□□□ -0.58
PHF3-211ENST00000514822 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
PHF3-211ENST00000514822 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
PHF3-211ENST00000514822 FAM198AQ9UFP1 575 aa11.42□□□□□ -0.58
PHF3-211ENST00000514822 HIC1Q14526 733 aa11.41□□□□□ -0.58
PHF3-211ENST00000514822 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
PHF3-211ENST00000514822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
PHF3-211ENST00000514822 TATDN2Q93075 761 aa11.4□□□□□ -0.58
PHF3-211ENST00000514822 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
PHF3-211ENST00000514822 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
PHF3-211ENST00000514822 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
PHF3-211ENST00000514822 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
PHF3-211ENST00000514822 WNT2BQ93097 391 aa11.38□□□□□ -0.59
PHF3-211ENST00000514822 GNPATO15228 680 aa11.37□□□□□ -0.59
PHF3-211ENST00000514822 GPR37O15354 613 aa11.37□□□□□ -0.59
PHF3-211ENST00000514822 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
PHF3-211ENST00000514822 NUDT18Q6ZVK8 323 aa11.37□□□□□ -0.59
PHF3-211ENST00000514822 ZFRQ96KR1 1074 aaKnown RBP11.37□□□□□ -0.59
PHF3-211ENST00000514822 SMAPO00193 183 aa11.36□□□□□ -0.59
PHF3-211ENST00000514822 BCANQ96GW7 911 aa11.36□□□□□ -0.59
PHF3-211ENST00000514822 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
PHF3-211ENST00000514822 C3orf80F5H4A9 247 aa11.33□□□□□ -0.6
PHF3-211ENST00000514822 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
PHF3-211ENST00000514822 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
PHF3-211ENST00000514822 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
PHF3-211ENST00000514822 FECHP22830 423 aa11.3□□□□□ -0.6
PHF3-211ENST00000514822 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
PHF3-211ENST00000514822 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
PHF3-211ENST00000514822 EYA1Q99502 592 aa11.29□□□□□ -0.6
PHF3-211ENST00000514822 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
PHF3-211ENST00000514822 OATP04181 439 aa11.28□□□□□ -0.6
PHF3-211ENST00000514822 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
PHF3-211ENST00000514822 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
PHF3-211ENST00000514822 PTPN5P54829 565 aa11.27□□□□□ -0.61
PHF3-211ENST00000514822 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
PHF3-211ENST00000514822 BCAMP50895 628 aa11.26□□□□□ -0.61
PHF3-211ENST00000514822 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
PHF3-211ENST00000514822 DNAJB2P25686 324 aa11.24□□□□□ -0.61
PHF3-211ENST00000514822 MAP2K5Q13163 448 aa11.23□□□□□ -0.61
PHF3-211ENST00000514822 PXYLP1Q8TE99 480 aa11.23□□□□□ -0.61
PHF3-211ENST00000514822 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
PHF3-211ENST00000514822 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
PHF3-211ENST00000514822 METTL3Q86U44 580 aaKnown RBP11.22□□□□□ -0.61
PHF3-211ENST00000514822 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
PHF3-211ENST00000514822 TSR3Q9UJK0 312 aaKnown RBP11.22□□□□□ -0.61
PHF3-211ENST00000514822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
PHF3-211ENST00000514822 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
PHF3-211ENST00000514822 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
PHF3-211ENST00000514822 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
PHF3-211ENST00000514822 RNF40O75150 1001 aa11.2□□□□□ -0.62
PHF3-211ENST00000514822 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
PHF3-211ENST00000514822 PPP4CP60510 307 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms