RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 EIF2AK4Q9P2K8 1649 aaKnown RBP16.44■□□□□ 0.22
HMGXB3-205ENST00000514469 TCOF1Q13428 1488 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-205ENST00000514469 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
HMGXB3-205ENST00000514469 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
HMGXB3-205ENST00000514469 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
HMGXB3-205ENST00000514469 KIF3BO15066 747 aa16.41■□□□□ 0.22
HMGXB3-205ENST00000514469 PZPP20742 1482 aa16.41■□□□□ 0.22
HMGXB3-205ENST00000514469 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
HMGXB3-205ENST00000514469 CAMSAP1Q5T5Y3 1602 aa16.4■□□□□ 0.22
HMGXB3-205ENST00000514469 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
HMGXB3-205ENST00000514469 PTPRTO14522 1441 aa16.39■□□□□ 0.21
HMGXB3-205ENST00000514469 ABCC5O15440 1437 aa16.39■□□□□ 0.21
HMGXB3-205ENST00000514469 MROH1Q8NDA8 1641 aa16.39■□□□□ 0.21
HMGXB3-205ENST00000514469 DUOX2Q9NRD8 1548 aa16.39■□□□□ 0.21
HMGXB3-205ENST00000514469 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
HMGXB3-205ENST00000514469 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
HMGXB3-205ENST00000514469 DAPK1P53355 1430 aa16.37■□□□□ 0.21
HMGXB3-205ENST00000514469 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
HMGXB3-205ENST00000514469 ABCC3O15438 1527 aa16.37■□□□□ 0.21
HMGXB3-205ENST00000514469 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
HMGXB3-205ENST00000514469 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
HMGXB3-205ENST00000514469 KIF15Q9NS87 1388 aa16.35■□□□□ 0.21
HMGXB3-205ENST00000514469 ERBINQ96RT1 1412 aa16.35■□□□□ 0.21
HMGXB3-205ENST00000514469 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-205ENST00000514469 TNRQ92752 1358 aa16.33■□□□□ 0.2
HMGXB3-205ENST00000514469 DEPDC5O75140 1603 aa16.31■□□□□ 0.2
HMGXB3-205ENST00000514469 SPATA31D1Q6ZQQ2 1576 aa16.31■□□□□ 0.2
HMGXB3-205ENST00000514469 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
HMGXB3-205ENST00000514469 FBXO31Q5XUX0 539 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-205ENST00000514469 CEP152O94986 1710 aa16.3■□□□□ 0.2
HMGXB3-205ENST00000514469 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
HMGXB3-205ENST00000514469 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
HMGXB3-205ENST00000514469 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
HMGXB3-205ENST00000514469 ERVK-7P63135 1459 aa16.28■□□□□ 0.2
HMGXB3-205ENST00000514469 ANKRD30AQ9BXX3 1397 aa16.27■□□□□ 0.2
HMGXB3-205ENST00000514469 PKD2Q13563 968 aa16.27■□□□□ 0.2
HMGXB3-205ENST00000514469 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
HMGXB3-205ENST00000514469 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
HMGXB3-205ENST00000514469 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
HMGXB3-205ENST00000514469 POLR1AO95602 1720 aaPredicted RBP16.25■□□□□ 0.19
HMGXB3-205ENST00000514469 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
HMGXB3-205ENST00000514469 VWDEQ8N2E2 1590 aa16.25■□□□□ 0.19
HMGXB3-205ENST00000514469 UGGT1Q9NYU2 1555 aa16.25■□□□□ 0.19
HMGXB3-205ENST00000514469 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
HMGXB3-205ENST00000514469 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
HMGXB3-205ENST00000514469 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
HMGXB3-205ENST00000514469 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-205ENST00000514469 KANK1Q14678 1352 aa16.19■□□□□ 0.18
HMGXB3-205ENST00000514469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
HMGXB3-205ENST00000514469 UBR1Q8IWV7 1749 aa16.18■□□□□ 0.18
HMGXB3-205ENST00000514469 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
HMGXB3-205ENST00000514469 ZNF335Q9H4Z2 1342 aaPredicted RBP16.18■□□□□ 0.18
HMGXB3-205ENST00000514469 MED14O60244 1454 aa16.17■□□□□ 0.18
HMGXB3-205ENST00000514469 THEMISQ8N1K5 641 aaPredicted RBP16.17■□□□□ 0.18
HMGXB3-205ENST00000514469 ANKRD50Q9ULJ7 1429 aa16.16■□□□□ 0.18
HMGXB3-205ENST00000514469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
HMGXB3-205ENST00000514469 ROCK1Q13464 1354 aa16.14■□□□□ 0.17
HMGXB3-205ENST00000514469 UNC13BO14795 1591 aa16.14■□□□□ 0.17
HMGXB3-205ENST00000514469 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
HMGXB3-205ENST00000514469 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
HMGXB3-205ENST00000514469 SYNMO15061 1565 aa16.13■□□□□ 0.17
HMGXB3-205ENST00000514469 NPHP4O75161 1426 aaPredicted RBP16.13■□□□□ 0.17
HMGXB3-205ENST00000514469 ARHGAP23Q9P227 1491 aa16.13■□□□□ 0.17
HMGXB3-205ENST00000514469 SLIT1O75093 1534 aa16.13■□□□□ 0.17
HMGXB3-205ENST00000514469 PIK3C2BO00750 1634 aa16.12■□□□□ 0.17
HMGXB3-205ENST00000514469 KDM5AP29375 1690 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-205ENST00000514469 NOS1P29475 1434 aa16.11■□□□□ 0.17
HMGXB3-205ENST00000514469 CPS1P31327 1500 aa16.11■□□□□ 0.17
HMGXB3-205ENST00000514469 TET3O43151 1660 aa16.11■□□□□ 0.17
HMGXB3-205ENST00000514469 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-205ENST00000514469 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-205ENST00000514469 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.16
HMGXB3-205ENST00000514469 PPARGC1BQ86YN6 1023 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-205ENST00000514469 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
HMGXB3-205ENST00000514469 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-205ENST00000514469 IQGAP3Q86VI3 1631 aa16.06■□□□□ 0.16
HMGXB3-205ENST00000514469 RRBP1Q9P2E9 1410 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-205ENST00000514469 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
HMGXB3-205ENST00000514469 LTKP29376 864 aa16.03■□□□□ 0.16
HMGXB3-205ENST00000514469 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
HMGXB3-205ENST00000514469 E9PCH4 1651 aa16.02■□□□□ 0.16
HMGXB3-205ENST00000514469 IDI1Q13907 227 aa16.02■□□□□ 0.16
HMGXB3-205ENST00000514469 ITGAEP38570 1179 aa16■□□□□ 0.15
HMGXB3-205ENST00000514469 SLC52A1Q9NWF4 448 aa16■□□□□ 0.15
HMGXB3-205ENST00000514469 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
HMGXB3-205ENST00000514469 TXNDC2Q86VQ3 553 aa15.99■□□□□ 0.15
HMGXB3-205ENST00000514469 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
HMGXB3-205ENST00000514469 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
HMGXB3-205ENST00000514469 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
HMGXB3-205ENST00000514469 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
HMGXB3-205ENST00000514469 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
HMGXB3-205ENST00000514469 ZFYVE9O95405 1425 aa15.96■□□□□ 0.15
HMGXB3-205ENST00000514469 NUP155O75694 1391 aa15.96■□□□□ 0.15
HMGXB3-205ENST00000514469 NAIPQ13075 1403 aa15.94■□□□□ 0.14
HMGXB3-205ENST00000514469 MYO5BQ9ULV0 1848 aa15.93■□□□□ 0.14
HMGXB3-205ENST00000514469 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
HMGXB3-205ENST00000514469 HFM1A2PYH4 1435 aa15.91■□□□□ 0.14
HMGXB3-205ENST00000514469 RIMS2Q9UQ26 1411 aa15.91■□□□□ 0.14
HMGXB3-205ENST00000514469 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
HMGXB3-205ENST00000514469 PLEKHG1Q9ULL1 1385 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms