RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-210ENST00000513582 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
PDCD6-210ENST00000513582 MYBBP1AQ9BQG0 1328 aaKnown RBP14.32□□□□□ -0.12
PDCD6-210ENST00000513582 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
PDCD6-210ENST00000513582 EHBP1L1Q8N3D4 1523 aa14.31□□□□□ -0.12
PDCD6-210ENST00000513582 ESPNB1AK53 854 aa14.31□□□□□ -0.12
PDCD6-210ENST00000513582 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
PDCD6-210ENST00000513582 SEC24BO95487 1268 aa14.31□□□□□ -0.12
PDCD6-210ENST00000513582 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
PDCD6-210ENST00000513582 USP47Q96K76 1375 aa14.3□□□□□ -0.12
PDCD6-210ENST00000513582 SUPT6HQ7KZ85 1726 aaKnown RBP14.3□□□□□ -0.12
PDCD6-210ENST00000513582 MYH16Q9H6N6 1097 aa14.3□□□□□ -0.12
PDCD6-210ENST00000513582 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
PDCD6-210ENST00000513582 TRIM44Q96DX7 344 aaPredicted RBP14.29□□□□□ -0.12
PDCD6-210ENST00000513582 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
PDCD6-210ENST00000513582 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
PDCD6-210ENST00000513582 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
PDCD6-210ENST00000513582 NEUROD2Q15784 382 aa14.28□□□□□ -0.12
PDCD6-210ENST00000513582 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
PDCD6-210ENST00000513582 GRIN2BQ13224 1484 aa14.28□□□□□ -0.12
PDCD6-210ENST00000513582 BRD4O60885 1362 aaPredicted RBP14.28□□□□□ -0.12
PDCD6-210ENST00000513582 KIF15Q9NS87 1388 aa14.27□□□□□ -0.12
PDCD6-210ENST00000513582 FSD2A1L4K1 749 aa14.27□□□□□ -0.12
PDCD6-210ENST00000513582 AAMPQ13685 434 aa14.27□□□□□ -0.12
PDCD6-210ENST00000513582 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
PDCD6-210ENST00000513582 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
PDCD6-210ENST00000513582 USP19O94966 1318 aa14.26□□□□□ -0.13
PDCD6-210ENST00000513582 PRDM4Q9UKN5 801 aa14.25□□□□□ -0.13
PDCD6-210ENST00000513582 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
PDCD6-210ENST00000513582 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
PDCD6-210ENST00000513582 RALBP1Q15311 655 aa14.24□□□□□ -0.13
PDCD6-210ENST00000513582 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
PDCD6-210ENST00000513582 HECW1Q76N89 1606 aa14.24□□□□□ -0.13
PDCD6-210ENST00000513582 TPM2P07951 284 aa14.24□□□□□ -0.13
PDCD6-210ENST00000513582 MRE11P49959 708 aa14.24□□□□□ -0.13
PDCD6-210ENST00000513582 TRAK2O60296 914 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 MCM4P33991 863 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 ANTXR1Q9H6X2 564 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 GRPEL1Q9HAV7 217 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 KDM6BO15054 1643 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 NLRP13Q86W25 1043 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 NUP155O75694 1391 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 FAM13BQ9NYF5 915 aa14.23□□□□□ -0.13
PDCD6-210ENST00000513582 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
PDCD6-210ENST00000513582 MIA2Q96PC5 1412 aa14.22□□□□□ -0.13
PDCD6-210ENST00000513582 UGGT2Q9NYU1 1516 aa14.22□□□□□ -0.13
PDCD6-210ENST00000513582 RPRD2Q5VT52 1461 aaKnown RBP14.21□□□□□ -0.13
PDCD6-210ENST00000513582 TEX14Q8IWB6 1497 aa14.21□□□□□ -0.13
PDCD6-210ENST00000513582 BCORL1Q5H9F3 1711 aa14.21□□□□□ -0.13
PDCD6-210ENST00000513582 JPH4Q96JJ6 628 aa14.21□□□□□ -0.14
PDCD6-210ENST00000513582 FGD1P98174 961 aa14.2□□□□□ -0.14
PDCD6-210ENST00000513582 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
PDCD6-210ENST00000513582 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
PDCD6-210ENST00000513582 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
PDCD6-210ENST00000513582 ZHX1Q9UKY1 873 aaPredicted RBP14.18□□□□□ -0.14
PDCD6-210ENST00000513582 IGHDP01880 384 aa14.18□□□□□ -0.14
PDCD6-210ENST00000513582 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
PDCD6-210ENST00000513582 UPF2Q9HAU5 1272 aaKnown RBP14.17□□□□□ -0.14
PDCD6-210ENST00000513582 PRDM10Q9NQV6 1147 aa14.17□□□□□ -0.14
PDCD6-210ENST00000513582 ROCK2O75116 1388 aaKnown RBP14.17□□□□□ -0.14
PDCD6-210ENST00000513582 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
PDCD6-210ENST00000513582 EPRSP07814 1512 aaKnown RBP14.17□□□□□ -0.14
PDCD6-210ENST00000513582 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
PDCD6-210ENST00000513582 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.16□□□□□ -0.14
PDCD6-210ENST00000513582 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
PDCD6-210ENST00000513582 CDK13Q14004 1512 aaKnown RBP14.16□□□□□ -0.14
PDCD6-210ENST00000513582 PLPPR3Q6T4P5 718 aa14.15□□□□□ -0.14
PDCD6-210ENST00000513582 CCDC146Q8IYE0 955 aa14.15□□□□□ -0.14
PDCD6-210ENST00000513582 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
PDCD6-210ENST00000513582 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
PDCD6-210ENST00000513582 PDE4CQ08493 712 aa14.13□□□□□ -0.15
PDCD6-210ENST00000513582 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
PDCD6-210ENST00000513582 RIPK4P57078 832 aa14.12□□□□□ -0.15
PDCD6-210ENST00000513582 R3HCC1Q9Y3T6 440 aaKnown RBP14.12□□□□□ -0.15
PDCD6-210ENST00000513582 MAGI3Q5TCQ9 1506 aa14.12□□□□□ -0.15
PDCD6-210ENST00000513582 GAS2L3Q86XJ1 694 aa14.12□□□□□ -0.15
PDCD6-210ENST00000513582 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
PDCD6-210ENST00000513582 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
PDCD6-210ENST00000513582 DUSP27Q5VZP5 1158 aa14.11□□□□□ -0.15
PDCD6-210ENST00000513582 ADAMTS8Q9UP79 889 aa14.11□□□□□ -0.15
PDCD6-210ENST00000513582 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
PDCD6-210ENST00000513582 BCAR3O75815 825 aa14.11□□□□□ -0.15
PDCD6-210ENST00000513582 SAFB2Q14151 953 aaKnown RBP eCLIP14.11□□□□□ -0.153e-8■■□□□ 13.6
PDCD6-210ENST00000513582 CHMP5Q9NZZ3 219 aa14.1□□□□□ -0.15
PDCD6-210ENST00000513582 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
PDCD6-210ENST00000513582 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
PDCD6-210ENST00000513582 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
PDCD6-210ENST00000513582 TBC1D32Q96NH3 1257 aa14.09□□□□□ -0.15
PDCD6-210ENST00000513582 DAPK1P53355 1430 aa14.08□□□□□ -0.16
PDCD6-210ENST00000513582 PANK3Q9H999 370 aa14.08□□□□□ -0.16
PDCD6-210ENST00000513582 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
PDCD6-210ENST00000513582 MAPK8IP3Q9UPT6 1336 aa14.06□□□□□ -0.16
PDCD6-210ENST00000513582 PARD3Q8TEW0 1356 aa14.06□□□□□ -0.16
PDCD6-210ENST00000513582 PLEKHH1Q9ULM0 1364 aa14.06□□□□□ -0.16
PDCD6-210ENST00000513582 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
PDCD6-210ENST00000513582 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
PDCD6-210ENST00000513582 OFD1O75665 1012 aa14.06□□□□□ -0.16
PDCD6-210ENST00000513582 MFAP1P55081 439 aaKnown RBP14.05□□□□□ -0.16
PDCD6-210ENST00000513582 ZSCAN30Q86W11 494 aa14.05□□□□□ -0.16
PDCD6-210ENST00000513582 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms