RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
GYPB-213ENST00000513128 SUPT6HQ7KZ85 1726 aaKnown RBP9.58□□□□□ -0.88
GYPB-213ENST00000513128 UHRF1BP1Q6BDS2 1440 aa9.57□□□□□ -0.88
GYPB-213ENST00000513128 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
GYPB-213ENST00000513128 HNRNPMP52272 730 aaKnown RBP eCLIP9.56□□□□□ -0.88
GYPB-213ENST00000513128 TSHZ2Q9NRE2 1034 aa9.56□□□□□ -0.88
GYPB-213ENST00000513128 INO80Q9ULG1 1556 aaPredicted RBP9.55□□□□□ -0.88
GYPB-213ENST00000513128 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
GYPB-213ENST00000513128 ATP7AQ04656 1500 aa9.55□□□□□ -0.88
GYPB-213ENST00000513128 MROH2AA6NES4 1674 aa9.55□□□□□ -0.88
GYPB-213ENST00000513128 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
GYPB-213ENST00000513128 PLXNC1O60486 1568 aa9.54□□□□□ -0.88
GYPB-213ENST00000513128 TIAM1Q13009 1591 aa9.53□□□□□ -0.88
GYPB-213ENST00000513128 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
GYPB-213ENST00000513128 ZNF644Q9H582 1327 aaPredicted RBP9.53□□□□□ -0.88
GYPB-213ENST00000513128 LTBP4Q8N2S1 1624 aa9.53□□□□□ -0.88
GYPB-213ENST00000513128 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
GYPB-213ENST00000513128 CNTLNQ9NXG0 1405 aa9.52□□□□□ -0.89
GYPB-213ENST00000513128 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
GYPB-213ENST00000513128 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
GYPB-213ENST00000513128 PTPRTO14522 1441 aa9.51□□□□□ -0.89
GYPB-213ENST00000513128 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
GYPB-213ENST00000513128 KIAA1107Q9UPP5 1409 aa9.51□□□□□ -0.89
GYPB-213ENST00000513128 CAMSAP1Q5T5Y3 1602 aa9.51□□□□□ -0.89
GYPB-213ENST00000513128 A2MP01023 1474 aa9.51□□□□□ -0.89
GYPB-213ENST00000513128 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
GYPB-213ENST00000513128 MYO3AQ8NEV4 1616 aa9.5□□□□□ -0.89
GYPB-213ENST00000513128 MBD5Q9P267 1494 aa9.5□□□□□ -0.89
GYPB-213ENST00000513128 ADGBQ8N7X0 1667 aa9.5□□□□□ -0.89
GYPB-213ENST00000513128 MTUS2Q5JR59 1369 aa9.5□□□□□ -0.89
GYPB-213ENST00000513128 NPATQ14207 1427 aa9.49□□□□□ -0.89
GYPB-213ENST00000513128 PLEKHH2Q8IVE3 1493 aa9.49□□□□□ -0.89
GYPB-213ENST00000513128 TULP1O00294 542 aaPredicted RBP9.49□□□□□ -0.89
GYPB-213ENST00000513128 RGL2O15211 777 aa9.49□□□□□ -0.89
GYPB-213ENST00000513128 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
GYPB-213ENST00000513128 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
GYPB-213ENST00000513128 EHBP1L1Q8N3D4 1523 aa9.48□□□□□ -0.89
GYPB-213ENST00000513128 CEP170BQ9Y4F5 1589 aaPredicted RBP9.47□□□□□ -0.89
GYPB-213ENST00000513128 GGT6Q6P531 493 aa9.47□□□□□ -0.89
GYPB-213ENST00000513128 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
GYPB-213ENST00000513128 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
GYPB-213ENST00000513128 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
GYPB-213ENST00000513128 CEP162Q5TB80 1403 aa9.47□□□□□ -0.89
GYPB-213ENST00000513128 ILDR2Q71H61 639 aa9.45□□□□□ -0.9
GYPB-213ENST00000513128 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
GYPB-213ENST00000513128 ZNF335Q9H4Z2 1342 aaPredicted RBP9.44□□□□□ -0.9
GYPB-213ENST00000513128 TCOF1Q13428 1488 aaKnown RBP9.44□□□□□ -0.9
GYPB-213ENST00000513128 NCOA2Q15596 1464 aa9.44□□□□□ -0.9
GYPB-213ENST00000513128 DNMT1P26358 1616 aaKnown RBP9.44□□□□□ -0.9
GYPB-213ENST00000513128 CAMSAP2Q08AD1 1489 aa9.43□□□□□ -0.9
GYPB-213ENST00000513128 PLA2R1Q13018 1463 aa9.43□□□□□ -0.9
GYPB-213ENST00000513128 RTEL1-TNFRSF6BF6WH68 1400 aa9.43□□□□□ -0.9
GYPB-213ENST00000513128 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
GYPB-213ENST00000513128 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
GYPB-213ENST00000513128 DISP3Q9P2K9 1392 aa9.42□□□□□ -0.9
GYPB-213ENST00000513128 APLP2Q06481 763 aa9.42□□□□□ -0.9
GYPB-213ENST00000513128 FBXO31Q5XUX0 539 aaPredicted RBP9.42□□□□□ -0.9
GYPB-213ENST00000513128 CCDC141Q6ZP82 1450 aa9.41□□□□□ -0.9
GYPB-213ENST00000513128 KIF3BO15066 747 aa9.41□□□□□ -0.9
GYPB-213ENST00000513128 POLR1AO95602 1720 aaPredicted RBP9.41□□□□□ -0.9
GYPB-213ENST00000513128 NEURL4Q96JN8 1562 aa9.41□□□□□ -0.9
GYPB-213ENST00000513128 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.9
GYPB-213ENST00000513128 ARHGEF5Q12774 1597 aa9.4□□□□□ -0.9
GYPB-213ENST00000513128 SPATA31D1Q6ZQQ2 1576 aa9.4□□□□□ -0.9
GYPB-213ENST00000513128 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
GYPB-213ENST00000513128 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
GYPB-213ENST00000513128 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
GYPB-213ENST00000513128 PZPP20742 1482 aa9.39□□□□□ -0.91
GYPB-213ENST00000513128 LRRC9Q6ZRR7 1453 aa9.38□□□□□ -0.91
GYPB-213ENST00000513128 TNRQ92752 1358 aa9.37□□□□□ -0.91
GYPB-213ENST00000513128 UBAP1LF5GYI3 381 aa9.37□□□□□ -0.91
GYPB-213ENST00000513128 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
GYPB-213ENST00000513128 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
GYPB-213ENST00000513128 WASHC2CQ9Y4E1 1318 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 POLA2Q14181 598 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 NBR1Q14596 966 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 MAST1Q9Y2H9 1570 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.91
GYPB-213ENST00000513128 FAM135AQ9P2D6 1515 aa9.36□□□□□ -0.91
GYPB-213ENST00000513128 CEP152O94986 1710 aa9.35□□□□□ -0.91
GYPB-213ENST00000513128 VWDEQ8N2E2 1590 aa9.35□□□□□ -0.91
GYPB-213ENST00000513128 ABCC3O15438 1527 aa9.35□□□□□ -0.91
GYPB-213ENST00000513128 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
GYPB-213ENST00000513128 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
GYPB-213ENST00000513128 MIA2Q96PC5 1412 aa9.34□□□□□ -0.91
GYPB-213ENST00000513128 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
GYPB-213ENST00000513128 RSPH4AQ5TD94 716 aa9.34□□□□□ -0.91
GYPB-213ENST00000513128 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
GYPB-213ENST00000513128 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
GYPB-213ENST00000513128 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
GYPB-213ENST00000513128 SOCS7O14512 581 aa9.33□□□□□ -0.92
GYPB-213ENST00000513128 EIF2AK4Q9P2K8 1649 aaKnown RBP9.33□□□□□ -0.92
GYPB-213ENST00000513128 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
GYPB-213ENST00000513128 DEPDC5O75140 1603 aa9.32□□□□□ -0.92
GYPB-213ENST00000513128 TSPY4P0CV99 314 aa9.32□□□□□ -0.92
GYPB-213ENST00000513128 TSPY10P0CW01 314 aa9.32□□□□□ -0.92
GYPB-213ENST00000513128 SPINK5Q9NQ38 1064 aaPredicted RBP9.32□□□□□ -0.92
GYPB-213ENST00000513128 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms