RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 HECW2Q9P2P5 1572 aa34.92■■■■□ 3.18
SPOCK3-221ENST00000512648 MYT1LQ9UL68 1186 aa34.9■■■■□ 3.18
SPOCK3-221ENST00000512648 A2MP01023 1474 aa34.89■■■■□ 3.18
SPOCK3-221ENST00000512648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.89■■■■□ 3.18
SPOCK3-221ENST00000512648 L3MBTL2Q969R5 705 aa34.88■■■■□ 3.17
SPOCK3-221ENST00000512648 ATP10AO60312 1499 aa34.87■■■■□ 3.17
SPOCK3-221ENST00000512648 VWDEQ8N2E2 1590 aa34.87■■■■□ 3.17
SPOCK3-221ENST00000512648 RICTORQ6R327 1708 aa34.85■■■■□ 3.17
SPOCK3-221ENST00000512648 RAPGEF3O95398 923 aa34.84■■■■□ 3.17
SPOCK3-221ENST00000512648 KANK1Q14678 1352 aa34.84■■■■□ 3.17
SPOCK3-221ENST00000512648 PPRC1Q5VV67 1664 aaKnown RBP34.83■■■■□ 3.17
SPOCK3-221ENST00000512648 KIF3BO15066 747 aa34.82■■■■□ 3.16
SPOCK3-221ENST00000512648 PRDM15P57071 1507 aaPredicted RBP34.81■■■■□ 3.16
SPOCK3-221ENST00000512648 ZMYM4Q5VZL5 1548 aa34.78■■■■□ 3.16
SPOCK3-221ENST00000512648 BCORL1Q5H9F3 1711 aa34.78■■■■□ 3.16
SPOCK3-221ENST00000512648 PLA2R1Q13018 1463 aa34.77■■■■□ 3.16
SPOCK3-221ENST00000512648 FRMPD1Q5SYB0 1578 aa34.76■■■■□ 3.16
SPOCK3-221ENST00000512648 DIEXFQ68CQ4 756 aaKnown RBP34.75■■■■□ 3.15
SPOCK3-221ENST00000512648 MROH1Q8NDA8 1641 aa34.75■■■■□ 3.15
SPOCK3-221ENST00000512648 RNF17Q9BXT8 1623 aaKnown RBP34.75■■■■□ 3.15
SPOCK3-221ENST00000512648 ABCA6Q8N139 1617 aa34.74■■■■□ 3.15
SPOCK3-221ENST00000512648 KIF13AQ9H1H9 1805 aa34.74■■■■□ 3.15
SPOCK3-221ENST00000512648 LMTK2Q8IWU2 1503 aa34.73■■■■□ 3.15
SPOCK3-221ENST00000512648 DIP2CQ9Y2E4 1556 aa34.72■■■■□ 3.15
SPOCK3-221ENST00000512648 CCDC144AA2RUR9 1427 aa34.7■■■■□ 3.15
SPOCK3-221ENST00000512648 TET3O43151 1660 aa34.7■■■■□ 3.15
SPOCK3-221ENST00000512648 PTPRTO14522 1441 aa34.69■■■■□ 3.14
SPOCK3-221ENST00000512648 UHRF1BP1Q6BDS2 1440 aa34.63■■■■□ 3.13
SPOCK3-221ENST00000512648 E9PCH4 1651 aa34.62■■■■□ 3.13
SPOCK3-221ENST00000512648 TSPOAP1O95153 1857 aa34.62■■■■□ 3.13
SPOCK3-221ENST00000512648 YEATS2Q9ULM3 1422 aa34.61■■■■□ 3.13
SPOCK3-221ENST00000512648 NBPF8Q3BBV2 869 aa34.59■■■■□ 3.13
SPOCK3-221ENST00000512648 REREQ9P2R6 1566 aa34.58■■■■□ 3.13
SPOCK3-221ENST00000512648 TRPM2O94759 1503 aa34.57■■■■□ 3.13
SPOCK3-221ENST00000512648 EFCAB6Q5THR3 1501 aa34.55■■■■□ 3.12
SPOCK3-221ENST00000512648 COL17A1Q9UMD9 1497 aaPredicted RBP34.51■■■■□ 3.11
SPOCK3-221ENST00000512648 AGLP35573 1532 aa34.49■■■■□ 3.11
SPOCK3-221ENST00000512648 GGT6Q6P531 493 aa34.49■■■■□ 3.11
SPOCK3-221ENST00000512648 NEURL4Q96JN8 1562 aa34.48■■■■□ 3.11
SPOCK3-221ENST00000512648 STAC3Q96MF2 364 aa34.48■■■■□ 3.11
SPOCK3-221ENST00000512648 DNAJC5Q9H3Z4 198 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 PPP6R1Q9UPN7 881 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 SPHKAPQ2M3C7 1700 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 ABCC3O15438 1527 aa34.47■■■■□ 3.11
SPOCK3-221ENST00000512648 SPATA31E1Q6ZUB1 1445 aa34.46■■■■□ 3.11
SPOCK3-221ENST00000512648 EIF4G2P78344 907 aaKnown RBP eCLIP34.46■■■■□ 3.11
SPOCK3-221ENST00000512648 WASHC2CQ9Y4E1 1318 aa34.44■■■■□ 3.1
SPOCK3-221ENST00000512648 ARHGAP31Q2M1Z3 1444 aa34.43■■■■□ 3.1
SPOCK3-221ENST00000512648 DCAF11Q8TEB1 546 aa34.43■■■■□ 3.1
SPOCK3-221ENST00000512648 RALGAPBQ86X10 1494 aa34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 CEP152O94986 1710 aa34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 NPATQ14207 1427 aa34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 ZC3H13Q5T200 1668 aaKnown RBP34.39■■■■□ 3.1
SPOCK3-221ENST00000512648 HSPA5P11021 654 aaKnown RBP34.37■■■■□ 3.09
SPOCK3-221ENST00000512648 CNTLNQ9NXG0 1405 aa34.36■■■■□ 3.09
SPOCK3-221ENST00000512648 CLTCL1P53675 1640 aa34.35■■■■□ 3.09
SPOCK3-221ENST00000512648 ARHGEF40Q8TER5 1519 aa34.35■■■■□ 3.09
SPOCK3-221ENST00000512648 PRAG1Q86YV5 1406 aa34.35■■■■□ 3.09
SPOCK3-221ENST00000512648 RGL3Q3MIN7 710 aa34.33■■■■□ 3.09
SPOCK3-221ENST00000512648 KDM2AQ9Y2K7 1162 aa34.32■■■■□ 3.08
SPOCK3-221ENST00000512648 NOS1P29475 1434 aa34.31■■■■□ 3.08
SPOCK3-221ENST00000512648 CAMSAP1Q5T5Y3 1602 aa34.3■■■■□ 3.08
SPOCK3-221ENST00000512648 HIRIP3Q9BW71 556 aaPredicted RBP34.26■■■■□ 3.07
SPOCK3-221ENST00000512648 ZNF326Q5BKZ1 582 aaKnown RBP34.25■■■■□ 3.07
SPOCK3-221ENST00000512648 GPRASP1Q5JY77 1395 aa34.24■■■■□ 3.07
SPOCK3-221ENST00000512648 TRPM1Q7Z4N2 1603 aa34.18■■■■□ 3.06
SPOCK3-221ENST00000512648 CARD11Q9BXL7 1154 aa34.18■■■■□ 3.06
SPOCK3-221ENST00000512648 USP47Q96K76 1375 aa34.18■■■■□ 3.06
SPOCK3-221ENST00000512648 MIER1Q8N108 512 aa34.16■■■■□ 3.06
SPOCK3-221ENST00000512648 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 SLC52A1Q9NWF4 448 aa34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 UGGT1Q9NYU2 1555 aa34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 ROCK2O75116 1388 aaKnown RBP34.15■■■■□ 3.06
SPOCK3-221ENST00000512648 LAMC1P11047 1609 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 ADGRB3O60242 1522 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 KIF1BO60333 1816 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 RPGRIP1LQ68CZ1 1315 aa34.14■■■■□ 3.06
SPOCK3-221ENST00000512648 MYOM2P54296 1465 aa34.13■■■■□ 3.05
SPOCK3-221ENST00000512648 DDX10Q13206 875 aaKnown RBP34.13■■■■□ 3.05
SPOCK3-221ENST00000512648 PIK3C2BO00750 1634 aa34.12■■■■□ 3.05
SPOCK3-221ENST00000512648 ARID4BQ4LE39 1312 aaPredicted RBP34.1■■■■□ 3.05
SPOCK3-221ENST00000512648 WASHC2AQ641Q2 1341 aa34.1■■■■□ 3.05
SPOCK3-221ENST00000512648 SIGLEC1Q9BZZ2 1709 aa34.1■■■■□ 3.05
SPOCK3-221ENST00000512648 MADDQ8WXG6 1647 aa34.09■■■■□ 3.05
SPOCK3-221ENST00000512648 SYNMO15061 1565 aa34.09■■■■□ 3.05
SPOCK3-221ENST00000512648 CCDC7Q96M83 1385 aa34.06■■■■□ 3.04
SPOCK3-221ENST00000512648 NRXN1Q9ULB1 1477 aa34.04■■■■□ 3.04
SPOCK3-221ENST00000512648 NBPF1Q3BBV0 1214 aa34.04■■■■□ 3.04
SPOCK3-221ENST00000512648 C11orf95C9JLR9 678 aaPredicted RBP34.02■■■■□ 3.04
SPOCK3-221ENST00000512648 PREX1Q8TCU6 1659 aa34.02■■■■□ 3.04
SPOCK3-221ENST00000512648 ERVK-7P63135 1459 aa34.01■■■■□ 3.04
SPOCK3-221ENST00000512648 IFT172Q9UG01 1749 aa34■■■■□ 3.03
SPOCK3-221ENST00000512648 IDI1Q13907 227 aa34■■■■□ 3.03
SPOCK3-221ENST00000512648 KIAA1210Q9ULL0 1709 aa34■■■■□ 3.03
SPOCK3-221ENST00000512648 MROH2AA6NES4 1674 aa33.98■■■■□ 3.03
SPOCK3-221ENST00000512648 KIF7Q2M1P5 1343 aa33.96■■■■□ 3.03
SPOCK3-221ENST00000512648 SPATA31D1Q6ZQQ2 1576 aa33.95■■■■□ 3.03
SPOCK3-221ENST00000512648 CLTCQ00610 1675 aaKnown RBP33.95■■■■□ 3.03
SPOCK3-221ENST00000512648 POLR1AO95602 1720 aaPredicted RBP33.95■■■■□ 3.03
SPOCK3-221ENST00000512648 ST20-MTHFSA0A0A6YYL1 179 aa33.95■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms